prot_P-littoralis_Contig77.136.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.136.2
Unique Nameprot_P-littoralis_Contig77.136.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length550
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig77.136.2 vs. uniprot
Match: A0A6H5L0K3_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K3_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.350e-22
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 0 
Query:  440 SAVGGEEGCCGLCGYTLEAGQAVVRSPGCAQGLMLHLRCFD--ESGVVFSDDADEGRLKFGCDCGQFHSGVGLTEGVYAFSSSPECALKPSA 529
            SA GG+  CC LCGYTLE GQ VVRSP C +GLM+H  CF+  +S  VFSDD+D G LKFGCDCGQFH GVGLT GVYA S + + AL PSA
Sbjct:  245 SATGGDCCCC-LCGYTLEEGQRVVRSPECGEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLASD-ALAPSA 334
[Close]
BLAST of mRNA_P-littoralis_Contig77.136.2 vs. uniprot
Match: D7FN84_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN84_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 8.370e-22
Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:  451 LCGYTLEAGQAVVRSPGCAQGLMLHLRCFD--ESGVVFSDDADEGRLKFGCDCGQFHSGVGLTEGVYAFSSSPECALKP 527
            LCGYT+E GQ VVRSP CA+GLM+H  CF+  +S  VFSDD+D G LKFGCDCGQFH GVGLT GVYA S +   AL P
Sbjct:   37 LCGYTIEEGQRVVRSPECAEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLAASDALAP 115
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.136.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0K3_9PHAE1.350e-2266.30Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
D7FN84_ECTSI8.370e-2267.09Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..308
NoneNo IPR availableCOILSCoilCoilcoord: 224..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..179
NoneNo IPR availablePANTHERPTHR22891EUKARYOTIC TRANSLATION INITIATION FACTOR 2Ccoord: 201..341
NoneNo IPR availablePANTHERPTHR22891:SF107ARGONAUT-LIKE PROTEINcoord: 201..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:576250..580542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.136.2mRNA_P-littoralis_Contig77.136.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 575911..580542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.136.2 ID=prot_P-littoralis_Contig77.136.2|Name=mRNA_P-littoralis_Contig77.136.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp
MRNRLNTMELLMAPSNEDASVNQQSGSSANENNRSSLLASSTSPSRPRGP
LPPHATGRAVAAAGRRVWRAALATAIAFRALLVLWAHFTARLLRRAVGGL
IKTKESRGGQGSWEGSRRGSGIMSPAAGCYRYSSPEGGAGGGRGLAGKRG
VVKSSSSSSSLPSSFVRSSPVSPPGALLQQSLESGYGGLEQGRAGGDGGD
DDGGGGEHFWRETWRRHHAQQPQQERWQQQEQRQQQEQQKQQKRYHQPWE
EEEEGQRQRRQQEQQQHHQQHEDQWQQQQKFQQRQRQQQQQQQQQEQQQQ
QHHQQQQQQQQQQPERGFDLLPPPPSSSAGSLQQRGAGEERADCREDINY
NFNNRRATLLAARTSGDNENCTSSSIDSGRATAPASPVGTTVHDHAHHNK
HNNCCSNGSMATAVLCTNENSSATPWAAAAAAAAAVVTMSAVGGEEGCCG
LCGYTLEAGQAVVRSPGCAQGLMLHLRCFDESGVVFSDDADEGRLKFGCD
CGQFHSGVGLTEGVYAFSSSPECALKPSASDWSSSLSGFPGGTVAVAMAA
back to top