mRNA_P-littoralis_Contig77.31.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.31.1
Unique NamemRNA_P-littoralis_Contig77.31.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 8.760e-33
Identity = 68/78 (87.18%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MGTG+SK+NDDLVL E+DDD+L+DALRSNLTRLIAYAKSAD  LQRQVAEKLANEAV+PSRQAQIV+LGGLKLLLPLT
Sbjct:    1 MGTGESKMNDDLVLEEEDDDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPLT 78
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.380e-21
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 1 
Query:    1 MGTGQSKVND-DLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG+G+SK  + D +  EDDD+ LS ALR +L+RLIAYA+SAD  LQRQVAEKLANEAVRP RQ QI ELGGL+LLLPLT
Sbjct:    1 MGSGESKREEKDELEFEDDDEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPLT 79
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.210e-20
Identity = 54/80 (67.50%), Postives = 61/80 (76.25%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLEDD--DDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   +K + D    E+D  DDA ++ALR NL RLI YAKSADT LQR+VAEKLANEAV+P RQ QIVEL GLKLLLPLT
Sbjct:    1 MGNASAKGSKDEFTFEEDTSDDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPLT 80
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A2D4C729_PYTIN (Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C729_PYTIN)

HSP 1 Score: 95.1 bits (235), Expect = 1.570e-19
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLED-DDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MGT  SK + D    ED D+D  ++ALR NL RLI YAKSAD+ LQR+VAEKLANEAV+P RQ QIVEL GLKLLLPLT
Sbjct:    1 MGTAGSKGSKDEFTFEDADEDTFTEALRVNLQRLIVYAKSADSTLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.510e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:    1 MGTGQSKVND-DLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   SK    D    ED D+  +DAL+ NL RLIAYAKSAD +LQR+VAEKLANEAV+P RQ QIVEL GLKLLLPLT
Sbjct:    1 MGQSGSKGGSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.370e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:    1 MGTGQSKVND-DLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   SK    D    ED D+  +DAL+ NL RLIAYAKSAD +LQR+VAEKLANEAV+P RQ QIVEL GLKLLLPLT
Sbjct:    1 MGQSGSKGGSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A7S1TZQ4_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.060e-17
Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   +K  D+  + E+D++ +S+ +R+ L+RLI YA+S+D  LQR VAEKLANEAV+P+RQ QIVELGGL+LLLPLT
Sbjct:   54 MGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK)

HSP 1 Score: 90.1 bits (222), Expect = 1.110e-17
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 1 
Query:    1 MGTGQSKVND-DLVLLEDDD--DALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG G SK ++ D + LED D  + L+  LR +L+RLI YA+SAD  LQRQVAEKLANEAV+P RQ QIVELGGLKLLLPLT
Sbjct:    1 MGQGDSKHSEKDEIELEDADTEEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPLT 81
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: A0A7S1XQE0_9STRA (Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQE0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.140e-17
Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   +K  D+  + E+D++ +S+ +R+ L+RLI YA+S+D  LQR VAEKLANEAV+P+RQ QIVELGGL+LLLPLT
Sbjct:   54 MGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
[Close]
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Match: F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.690e-17
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1 
Query:    1 MGTGQSKVNDDLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAEKLANEAVRPSRQAQIVELGGLKLLLPLT 234
            MG   ++   D    ++ D+  ++AL+ NL RLIAYAKSADT LQR+VAEKLANEAV+P RQ QIVEL GL+LLLPLT
Sbjct:    1 MGNQTAREQKDEFNFDESDEGFTEALQINLQRLIAYAKSADTSLQREVAEKLANEAVKPDRQVQIVELCGLELLLPLT 78
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y7_ECTSI8.760e-3387.18Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YNM9_9STRA2.380e-2170.89Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=3... [more]
A0A5D6Y1Z7_9STRA9.210e-2067.50Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID... [more]
A0A2D4C729_PYTIN1.570e-1968.35Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepI... [more]
A0A397ACU4_9STRA4.510e-1967.09Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A418DV07_9STRA5.370e-1967.09Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A7S1TZQ4_9STRA1.060e-1758.97Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A6S9E232_HETAK1.110e-1766.67Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A7S1XQE0_9STRA3.140e-1758.97Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=... [more]
F0WLI4_9STRA3.690e-1761.54Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:91915..95715 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6Y7
PFAMsAnk_4,Arm
Model size807
Max annot lvl2759|Eukaryota
KEGG koko:K08332
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.44e-33
EggNOG OGsKOG4224@1|root,KOG4224@2759|Eukaryota
Ec32 ortholog descriptionArmadillo
Ec32 orthologEc-01_011740.1
Descriptionnucleus-vacuole junction assembly
Cds size807
COG categoryS
BRITEko00000,ko03029,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.31.1prot_P-littoralis_Contig77.31.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 91915..95715 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791584.8025134-CDS-P-littoralis_Contig77:91914..920541680791584.8025134-CDS-P-littoralis_Contig77:91914..92054Pylaiella littoralis U1_48CDSP-littoralis_Contig77 91915..92054 -
1680791584.8147771-CDS-P-littoralis_Contig77:92638..927611680791584.8147771-CDS-P-littoralis_Contig77:92638..92761Pylaiella littoralis U1_48CDSP-littoralis_Contig77 92639..92761 -
1680791584.8263187-CDS-P-littoralis_Contig77:93203..934491680791584.8263187-CDS-P-littoralis_Contig77:93203..93449Pylaiella littoralis U1_48CDSP-littoralis_Contig77 93204..93449 -
1680791584.840935-CDS-P-littoralis_Contig77:94842..949651680791584.840935-CDS-P-littoralis_Contig77:94842..94965Pylaiella littoralis U1_48CDSP-littoralis_Contig77 94843..94965 -
1680791584.8554573-CDS-P-littoralis_Contig77:95274..953941680791584.8554573-CDS-P-littoralis_Contig77:95274..95394Pylaiella littoralis U1_48CDSP-littoralis_Contig77 95275..95394 -
1680791584.868854-CDS-P-littoralis_Contig77:95660..957151680791584.868854-CDS-P-littoralis_Contig77:95660..95715Pylaiella littoralis U1_48CDSP-littoralis_Contig77 95661..95715 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.31.1

>prot_P-littoralis_Contig77.31.1 ID=prot_P-littoralis_Contig77.31.1|Name=mRNA_P-littoralis_Contig77.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=269bp
MGTGQSKVNDDLVLLEDDDDALSDALRSNLTRLIAYAKSADTDLQRQVAE
KLANEAVRPSRQAQIVELGGLKLLLPLTQSRDVEVQRLAVHALANLSVNA
ENQERMAEEGGIDMLVAMLGSTHPHLQRQASKALANLGVNAKNKEIISKA
GGVGPLVKLAGSKRPGVAVEAVAALANLAVNDESELQIVRDGGLIPILEG
AKSSSMDLQSQCARAMRNLSVNPANKERILGMGGSDVLLALSRSRDDKIR
QQATKALENLDSDEPSRK*
back to top

mRNA from alignment at P-littoralis_Contig77:91915..95715-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.31.1 ID=mRNA_P-littoralis_Contig77.31.1|Name=mRNA_P-littoralis_Contig77.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3801bp|location=Sequence derived from alignment at P-littoralis_Contig77:91915..95715- (Pylaiella littoralis U1_48)
ATGGGAACTGGCCAGTCTAAAGTAAACGACGATCTGGTGCTTTTGGAGGA
CGATGGTAGATATGTGTAGTGTTGGGATTGGGATTTGCCGGTTACTGAAG
AAAATCTTGCACCACTCTACCTCAGCTGTACCTTCCTCTATGTCTATGTG
CTGACGAACAAGTAATGCATTCATTTGGTCAGTTTGTCGGACGCGTTTGC
TCCTGTCCTTGCACATTCTTCGAGCTACATGCGCAGCACCAAGCTGTTTT
GTACGTAGATCAACGGTCACGCTATTGAACACGGTGTGTTGCGTGTCTCG
TGTTCGCCAAAACTCGCGCAGATGACGCGCTCAGTGACGCCCTCCGGTCC
AACTTGACGAGACTCATTGCCTATGCAAAGAGCGCGGATACTGACCTTCA
ACGACAAGTGGCGGAGAAACTAGCCAATGAAGCAGTTAGACGTACGTCGT
ATATGTGTCCATTCAGGCTTTATCCATATTCCTGAGTGCCTTTCAAGTAT
AGTAGCTTCAGTCCGGTACGTCATCGCAACAGCAGTAGTGTTATTTCATC
GCACTTTCCCGGGGCTCCAGCTCTTTTGTAAATAATGTGTGTGTGCGTGC
GTTTTCGTCCCACTCATTATGGCGACAGTCTTTACACCCTTCGGTAATAT
CGTTGACGTTCGATACGACGGGCTTTAACGTTAGCGATGAGTCATTCTGG
AACACAGCAACACCACTGCCAGATGCTGCCCGAAACAAAACGCATCTCAG
CAAGCCGGCAAGCTCAAATTGTGGAGCTGGGCGGCCTGAAGCTTCTCCTG
CCTCTAACACAGTCAAGAGACGTTGAAGTTCAACGTTTGGCCGTCCATGC
CCTGGCAAACCTCTCCGTCAATGGTGAGTGCACTATTGCTACCATGTGCG
ACAAGTACGTACTACATGACCATGCATGTCTTACACACATGCCGATTGTT
TTAGTTCATTTTCTGCCTTGAAACATGCGCCCCGCCTACCGTATTCTACA
CAAGATACCACACCCCGTGTTAGGTTTTTTGCATTCCGTATTGCTCCACA
ACCAGGAGGGTGCGAACACCAAGCAGCCCGTCATACGAAAGCTCTTGACG
AGATCTTTCTAAAACCACCCCCTTTTCGGCAGTGGCACCCTCCTGGTTGT
GGAGCTATACGGAATGCAAAAAGCTTAACACGGGGTGTGGTATCTTGTGT
AGAATACGGTAACCTCTTAATCCACAATATAATTCATCGGTTTACAATAT
TAGTAAGACCACCACCGTGGAATGGACTGCAAGCTGCTTCCGAGCTTTTT
TGACAAACGCCTGATTGTTCTGAGTTTCCAAAGTCGTGTGTATGTTTTGG
ACGAACCTACCACGGCAGAATGCTGCCGGAGGCAGTCGCTGTGAGCAATA
TCTAGTGTCTGGGATCCAAGCCCTTGCGATGTGCTACAGATTACTACAGA
TAGAGGTAACTCGTTTGGCGATATTATTGAATCTAGCCCTCCTTCATCGA
ATTCTGTGAGCTACGAGGGGTAGTTCGGATGCTGCTGTAGGAGCCTCATT
TTTGAACGCTTTCAGCACACAGCAGCCGAAAAAGCAGAGCGTATGTGAGT
ACCTCTGACCGCTCCAGTATTTCAGCACAATTATTTCCTCACATGCCCCA
TCCATCGATGTGATTGATTTGAAAGCCAAGGCACTAACATATGCTCTGAT
TTTTCGGGTGTTGTGTGCTGTGTGAAAGCGTTCAACAGTAAGGGCGCTTC
AGCAGATTCCAAACTACGCCTCGTAGCCCACAGAAGTCGATAGAGGAGGG
TTCGTTTCGAAAATCGCAAACTAGGAATATCAAGTGTGTCGCGAGGGCTT
GGTTCTTCGACACTGTTCATTACCCGCAGCGATTGCCTTCGGGAGGATTC
TGGGATGGTAGGTTGGCACTGAAAATAAGACTTTGTAAACCCAGAATAAT
CAGGCGTTTGTCGAAAGCGTTCAAACAATGTGCAGCACGTTCCCCGTTGG
CCCCAAGTACTACTTTGTACTGTATAAGAGTCGTTTTGTTCAGCCTACAC
ATATACCGCCGAGAGGTTTAGACTTGCGTCCAGAATGGATGAGATAACAA
CATGCACATGCGCGCGCACACACACCGATCGCACTGGTACCTGCTTGAAG
TTCCCTTTCAAAAAATTTGGTCAATCAGAAAATCGCACGCGCACACTCCG
ATGAGGGCGACGAAACCACTGCGCAATGCATGCATGCTGCATACATTGCT
GCCGTTCATCACGCAGCCGAAAATCAAGAACGAATGGCCGAGGAGGGGGG
CATCGACATGCTGGTGGCTATGCTGGGGTCCACTCATCCGCACTTGCAAC
GCCAAGCCTCGAAGGCATTAGCGAATCTCGGAGTCAACGCCAAAAACAAG
GAAATCATCTCCAAGGCGGGCGGGGTAGGTCCGTTGGTGAAGCTGGCGGG
TTCGAAGAGACCGGGGGTGGCTGTGGAAGCCGTCGCCGCCCTGGCTAACC
TAGCGGTCAACGGTGAGTCGATTTCAGACCGTTACTGCGTACAAACCTAT
ACACGCGAGGTGGGGACTTTGTACTGTTTTTTGCACACACGCGTTATTGC
ATATTTTCGTCAAGTCCACCGCGTGCGTATGTTTCTTTATTTCTGTCATT
ATGTGACCGGTAGGCTAGACGGAGGATAGACCAGGTCTATCTTCCTCTCC
TTTGTCAAGAATGAAGAGGTGCATCGCACAGAAGAGACGATGGCGCTTCA
ACGACAGCGCTGGGGGCTACTTTCAACCATGCTTGCGTGCAAAACGATCT
TTGTCGTTTCGTTTTTCCACTTGGCGTGTAGTTTCGTTCAGCGTAGAGAT
ACGCCGAATATCAGACAGTAGGGTGCGACTCTCAATCCCACAACGACATG
AATAATTTGACCCCCTTCGCACCATTCCCTCTACTAATTCCACTCTTGAT
TTAGATGAGAGCGAGCTTCAGATAGTGCGGGACGGTGGTTTAATTCCAAT
ACTTGAAGGAGCTAAATCATCGAGCATGGATCTTCAGTCTCAGTGTGCGC
GGGCAATGCGCAACCTGTCTGTTAATCGTGAGCAACCGTCTCGGTGGAGT
CTATATGTGTCCATGTGTGGTGTGGGGAAAATTCTGCAGATTATGTTGTC
AGAGTGCTCACCAGACCATCGAGGAAAAAAAAACTTCAGCCCTTGCATAT
GTTCGCGTCGGCAGTATTATCGTTTCAATGTTCGTCCTAGACGCCTCCCT
CGTCTTCGAATTGTACGCACTAATAATTTCAAGGTTACGTGAAGCCTGGG
GGGTCGTATTTTGATGATGCAAAGCTTCTCGTGGTCTTTGGTAATAAAAG
CTCGTTCATTCGGCTGGCAACACATACGTCCTTAAGTAAAGCGACTTTGC
TTGGAAGCATGCAATAGAAAACGCGTTCCCCTTAGTCTTTGTTCCTGTCC
CCCGCCTGCTTGCTTGTACAACGATGGTTTTGATGATAAACATTTGAACT
AAGAATAATAAGTAGACGTGACCGCGGATCCTTGGCGGATTTCAGAGGTC
CGTTGGGTGGCTAATGGAGAACACCGTACACCACCTCCCTCCTACCGCAC
ACTAACTCACATCATGTGCTCCCACTCCAAACGTTTTTTTTTTCCCTACG
CGTGCCCTCAGCCGCGAACAAGGAGCGCATCCTGGGCATGGGTGGAAGCG
ATGTCTTGCTAGCTTTGAGCCGATCGAGGGACGACAAAATTAGGCAGCAA
GCCACCAAAGCGCTGGAGAATCTGGACTCGGATGAACCCTCCAGAAAGTG
A
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig77:91915..95715-

>mRNA_P-littoralis_Contig77.31.1 ID=mRNA_P-littoralis_Contig77.31.1|Name=mRNA_P-littoralis_Contig77.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=807bp|location=Sequence derived from alignment at P-littoralis_Contig77:91915..95715- (Pylaiella littoralis U1_48)
ATGGGAACTGGCCAGTCTAAAGTAAACGACGATCTGGTGCTTTTGGAGGA
CGATGATGACGCGCTCAGTGACGCCCTCCGGTCCAACTTGACGAGACTCA
TTGCCTATGCAAAGAGCGCGGATACTGACCTTCAACGACAAGTGGCGGAG
AAACTAGCCAATGAAGCAGTTAGACCAAGCCGGCAAGCTCAAATTGTGGA
GCTGGGCGGCCTGAAGCTTCTCCTGCCTCTAACACAGTCAAGAGACGTTG
AAGTTCAACGTTTGGCCGTCCATGCCCTGGCAAACCTCTCCGTCAATGCC
GAAAATCAAGAACGAATGGCCGAGGAGGGGGGCATCGACATGCTGGTGGC
TATGCTGGGGTCCACTCATCCGCACTTGCAACGCCAAGCCTCGAAGGCAT
TAGCGAATCTCGGAGTCAACGCCAAAAACAAGGAAATCATCTCCAAGGCG
GGCGGGGTAGGTCCGTTGGTGAAGCTGGCGGGTTCGAAGAGACCGGGGGT
GGCTGTGGAAGCCGTCGCCGCCCTGGCTAACCTAGCGGTCAACGATGAGA
GCGAGCTTCAGATAGTGCGGGACGGTGGTTTAATTCCAATACTTGAAGGA
GCTAAATCATCGAGCATGGATCTTCAGTCTCAGTGTGCGCGGGCAATGCG
CAACCTGTCTGTTAATCCCGCGAACAAGGAGCGCATCCTGGGCATGGGTG
GAAGCGATGTCTTGCTAGCTTTGAGCCGATCGAGGGACGACAAAATTAGG
CAGCAAGCCACCAAAGCGCTGGAGAATCTGGACTCGGATGAACCCTCCAG
AAAGTGA
back to top