prot_P-littoralis_Contig1194.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1194.5.1
Unique Nameprot_P-littoralis_Contig1194.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length114
Homology
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BLAST of mRNA_P-littoralis_Contig1194.5.1 vs. uniprot
Match: A0A6H5JXC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC7_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.850e-22
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    3 YCECVGEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIAAVETEDVRQTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCFEKACQALWPGDDPI 106
            YC     P P+ D ++  ER+ AA+QH G CG   A  IA ++   V   A+    E T K  RN+ACYDA  ALN RG GVQ+RR +CF  AC+A+WP D P+
Sbjct:   68 YCNHDTPPGPLPDISKLPERQAAAQQHAGLCGKYHAEHIANIDVTMVETRAAGA--EITTKRMRNKACYDAGTALNARGRGVQLRRQKCFTHACRAVWPDDQPL 169
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BLAST of mRNA_P-littoralis_Contig1194.5.1 vs. uniprot
Match: A0A6H5KV53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV53_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 9.100e-17
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0 
Query:   19 REERRVAARQHPGTCGVAMAGLIAAVETEDVRQTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCFEKACQALWPGDDPIDEWT 110
            R++   AA++HPG CGV +AG    V  +DV   A RR    TF    NQ C+DAA+ L V G GVQ+ R  CF +A +A++PG+   D+W 
Sbjct:   43 RDQGVEAAKEHPGLCGVYLAG----VSFDDVLAAAERRGVSVTFNVLLNQCCFDAAKKLRVGGMGVQLARKECFTQAFRAVFPGNGTPDQWV 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1194.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXC7_9PHAE1.850e-2246.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV53_9PHAE9.100e-1743.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1194contigP-littoralis_Contig1194:7759..9766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1194.5.1mRNA_P-littoralis_Contig1194.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1194 7757..9766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1194.5.1 ID=prot_P-littoralis_Contig1194.5.1|Name=mRNA_P-littoralis_Contig1194.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp
SLYCECVGEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIAAVETEDVR
QTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCFEKACQALW
PGDDPIDEWTAAGF
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