mRNA_P-littoralis_Contig1194.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.590e-16 Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 4 MLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPK 219
+LNE WS G W+S+DEQMV R ++R+ KPIK G+K WA+ C SGYCF DGGF GD K
Sbjct: 8 LLNECWSKLVEPGAWLSYDEQMVKSTARAMFALMRFNKTKPIKTGIKGWAICCPSGYCFVQSIDGGFSGDIK 79
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.930e-16 Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 4 MLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPK 219
+ N+ WS G W+S+DEQMV R ++RY KPIKNG+K WA+ C SGYCF DGGF GD K
Sbjct: 46 VFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIK 117
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A6H5KPD8_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD8_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.240e-15 Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 4 MLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPK 219
+LN+ WS G W+S+DEQMV R ++RY KPIK+G+K WA+ C SGY F DGGF GD K
Sbjct: 112 VLNKCWSELVEPGAWLSYDEQMVKSTARVMLALMRYNKAKPIKHGIKCWAICCPSGYSFVQSIDGGFSGDIK 183
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A6H5JHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH7_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 3.570e-13 Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 4 MLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPK 219
+LN+ WS G +S DEQMV R ++R+ KPIK G+K WA+ C SGYCF DGGF GD K
Sbjct: 209 VLNKCWSELVDPGACLSHDEQMVKSTARVMFMLMRFNKSKPIKLGIKCWAICCPSGYCFVQSIDGGFSGDIK 280
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A6G0U0A6_APHGL (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0U0A6_APHGL) HSP 1 Score: 51.6 bits (122), Expect = 7.550e-6 Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 49 ISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACF-SGYCFASYTDGGFVGDPK 219
I+ DE M+ C GRT + +YMP KPIK G+K+WA AC +GY G GDP+
Sbjct: 366 IAVDESMIACKGRTT--LKQYMPLKPIKKGIKVWAAACSKTGYLLNFDIYQGKQGDPE 421
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: UPI001F5FAADF (piggyBac transposable element-derived protein 3-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5FAADF) HSP 1 Score: 50.8 bits (120), Expect = 1.340e-5 Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 7 LNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCF 180
LN + V Q IS DE M+L GR++ + +Y P KPIK G+KLWA+A GY +
Sbjct: 196 LNSNFVKLYNVSQCISIDESMILFKGRSS--LKQYNPMKPIKKGVKLWAIADMDGYMY 251
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: K0S932_THAOC (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S932_THAOC) HSP 1 Score: 50.8 bits (120), Expect = 1.450e-5 Identity = 24/55 (43.64%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 28 ACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVAC-FSGYCFASY 189
A +GQ++S DE M+ G+ +F+ +YMP KPIK+G+K++A+ C +GY +A Y
Sbjct: 657 AYTLGQFLSADESMIKYKGKAIRFV-QYMPAKPIKHGIKVFALCCSLTGYIYAFY 710
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: UPI000B9349D9 (piggyBac transposable element-derived protein 4-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B9349D9) HSP 1 Score: 49.7 bits (117), Expect = 3.670e-5 Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 7 LNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACF-SGYCFASYTDGGFVGDPK 219
LNE + + I+ DE MV GRT + +YMP KPIK G+K+WA AC +GY G GDP+
Sbjct: 274 LNEKFFSNFNPSRNIALDESMVAFKGRTT--IKQYMPLKPIKRGIKIWAAACSKTGYLLQFEVYQGKQGDPE 343
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: UPI000763A92F (piggyBac transposable element-derived protein 4-like n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI000763A92F) HSP 1 Score: 49.3 bits (116), Expect = 4.870e-5 Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 7 LNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACF-SGYCFASYTDGGFVGDPK 219
LNE + + I+ DE MV GRT + +YMP KPIK G+K+WA AC +GY G GDP+
Sbjct: 135 LNEKFFSNFNPSRNIAIDESMVAFKGRTT--IKQYMPLKPIKRGIKVWAAACSKTGYLLQFEVYQGKQGDPE 204
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Match: A0A1Y1MT51_PHOPY (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MT51_PHOPY) HSP 1 Score: 48.9 bits (115), Expect = 5.910e-5 Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 1 TMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVAC 162
T L++T+ Q ++ DE MV GRT + +YMP KPIK G+K+WA+AC
Sbjct: 138 TYLSDTFLNVYTPAQNLAVDESMVAFKGRT--HLKQYMPLKPIKRGIKIWALAC 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1194.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1194.1.1 >prot_P-littoralis_Contig1194.1.1 ID=prot_P-littoralis_Contig1194.1.1|Name=mRNA_P-littoralis_Contig1194.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp MLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAback to top mRNA from alignment at P-littoralis_Contig1194:3537..4255+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1194.1.1 ID=mRNA_P-littoralis_Contig1194.1.1|Name=mRNA_P-littoralis_Contig1194.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=719bp|location=Sequence derived from alignment at P-littoralis_Contig1194:3537..4255+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1194:3537..4255+ >mRNA_P-littoralis_Contig1194.1.1 ID=mRNA_P-littoralis_Contig1194.1.1|Name=mRNA_P-littoralis_Contig1194.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=216bp|location=Sequence derived from alignment at P-littoralis_Contig1194:3537..4255+ (Pylaiella littoralis U1_48)back to top |