mRNA_P-littoralis_Contig766.30.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig766.30.2
Unique Name	mRNA_P-littoralis_Contig766.30.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig766.30.2 vs. uniprot
Match: A0A6H5JIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA0_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 6.980e-140
Identity = 435/1094 (39.76%), Postives = 551/1094 (50.37%), Query Frame = 3

Query:  204 MSQRSRPAYLDDGVDGDGDVLNRSWDVESRYRLQESALNLPR-EKTAALFRVQVELGLHELTAAMSSLSRRIDKLEENTAPPEKEQQDQAVKELARSARCISQALPGIASGRTRRRALHGYFRESDEQRSNCGDRIDPATRALVVEGLASLAGKVRVNTGLGDKDDGGGLGSRSGENSSSRGLSPSSPGRRKSRTRPKKEKGGKVWERVEKGLAEVMASKYFRDIGGHGHPRGLGSVSGTSFPSQEKSTPPRGYAPEGGFASERLQVEHLDGP-GPSLPQSPIAMAGSACGEAFPCASVPIWAGDGSSRKTKRERRRAGCAELGEPGGRHXXXXXXXXXXXXXXXXXXXQHDSSSVAPDVNQPGGQPRAAAICHAASGS-------ATTGFGGATAEAASAGGRVLKDAGGVVQGNEENTAGAGHFESVVECSGRPNDSGERITVRASTRARGAVGKTAVFAGSRNSNDNXXXXXXXXXXXHNKPVGGS-------DTEADPDLIARVLLNAARVAVETEERAGGPGSHEERQGLA--GSRA-YDGDGGGC---GGSTPRVEGNKDSRAEIEAVRALSSHVRSRASLVSSSXXXXXXXXXXXXXXX-AVRAKTVAAAGADAKGAEGDDKVAGGTKTGGMEASLSGSFGTARPR--RSSLGAGGGRQR-LTDGAQR--------LSLGLGGGGPVVDAQGFLDLGAASAEEKSLAVHTDVQEKRPKRSEPNRSDSSGSDPRVAELEEKLEEIRRIGERLKQEKEAALTAEPSVTIPDQDLTDLDFFLHHARSWNNNTLDSPHASSSLRHQQLDPVLRSGRAARGAASHSAFTSAESSPRRTAEDLSSAAEAPPNPDHHAAAEPALSRLLAPPFNNAELRGDFITSLERHLAEYEDRGNAEIEAD-----------EPDDNGACCAKDGRDKGVQGDRGKRESDGKGDGQRARHDCXXXXXXXKTRDADGNDNSDGVDSSSTPQTTHTVKEMPLGPRAGNQPGSRRAVETALINTNQPASTNVGEVETHNVEVEGAPVGALRGEVRDRETDG-------KKKAVLQETPNGSSKGXXXXSSTWAQEYHDYLCSKDP 3329
            MS+  R +YL+ G +     L++SWD ESR+RLQE+AL+LP  +   ALFRV+VELGLHELTAA++SLSRRIDKLEENTAPPE E+QD+AVKEL RSARC+SQALPGIAS RTRRRALHGYFRESDE+R   GDRIDPA RALV+EGLA LAGKVRV T  G+K +G   G+ S    ++RGLSPS P RR   T+      G+     E+G  +++     RD GG G  R L   S   F S    + PR   PEG F + RL+VEHL G   PSLP SPI + GS     FP A  P    D + R   +  R A  A L EP                                  N+  G+PR  A   A+ GS           +  ++A+   +  R +         +  N+A     +SVVE +GRP + GER    +  R  GA  +TA     RN                N   GGS        + +D D++ R+LLNAA  A E EERAGGPG+  + QG    G R+ +D DGGGC   GG   R E   D R E++ VRALSSH+R  AS  SSS                 V A   AA    AK +E     +GG  +   E     +   +RPR  RS L   GG++  L DG +R        +SL   GG  +VDAQGF+DLGAAS   +  A   +++ K+P+   P  SD+      VAELE KLEE+R+IG+R+K E  AA + EPSVTIP QD ++       +R  +++     H + S R +   PV        GAA+ SAFTS ESSP R   DL S+A  PP P  H   EPALS+LLAPPFNNA LRG+FI SLE+HLA+YED     ++ D           E +D  A C  DG      G R  R SDG                                 S+S   T  TV+E+P    A ++  S++ V         P      E  T N    G P G  R      +TDG        +K  ++E+  G        S  WAQEYHDYLC+KDP
Sbjct:    1 MSETPRSSYLECGEEKKSS-LSKSWDAESRFRLQENALSLPTSDDDTALFRVKVELGLHELTAALTSLSRRIDKLEENTAPPETEKQDEAVKELTRSARCLSQALPGIASARTRRRALHGYFRESDEKRGGYGDRIDPAARALVIEGLACLAGKVRVETARGNKANG--RGTWSSTIRATRGLSPS-PRRR---TQSTHSSVGETGVASEEG--KMLQGVISRD-GGDGDTRMLAPASEPDFSSLRTLSLPRVLTPEGEFPAGRLEVEHLRGSLEPSLPSSPITLTGSTNDNMFPPAPTPEKTKDRNLRAESKVGRWAESARLTEP----------------------------------NE--GKPRNKANPSASGGSNGGXXXXXXXXWXSSSADQDDSNSRAINGT------SANNSALGATSDSVVE-NGRPTE-GERCNDASVARV-GASERTADNGDDRNK------YATQLMNTTNAATGGSRGTPGEAGSASDRDVMVRMLLNAAGAAAEAEERAGGPGTQGDGQGFTRRGLRSWFDSDGGGCRSGGGIQVRQEDLDDFRREVDVVRALSSHLRGSASSTSSSPSASSPSWRAATGSVNVVTAAAPAAVVQQAKASEVPKDKSGGRVS--PEGVSLDALENSRPRSQRSLLDEEGGKKTPLLDGGRRSSFSCQHKVSLERDGGARLVDAQGFVDLGAASTCREDSARLAELEGKQPEGPYPEISDTG-----VAELEAKLEELRKIGDRIKDE--AAASMEPSVTIPTQDFSESGSPFPPSRHPHHHQ----HTNRSARTRGSKPV--------GAAAGSAFTSTESSPCRPTVDLLSSAVQPPRPGDHQGTEPALSKLLAPPFNNAALRGEFIASLEQHLAQYEDGSKHTVKYDAAGKAVGDGHAEVNDMVAACDGDGDQDSRNGSR--RRSDGT--------------------------------STSVLGTITTVREIPASSVA-SEARSKQLVRAP------PKEAEEAERVTPNAT--GTPSGVSR-----EDTDGLVEGEGHHEKTPIEESTAGME---AKTSINWAQEYHDYLCNKDP 961

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BLAST of mRNA_P-littoralis_Contig766.30.2 vs. uniprot
Match: D8LDJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ2_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.190e-62
Identity = 153/258 (59.30%), Postives = 184/258 (71.32%), Query Frame = 3

Query:  204 MSQRSRPAYLDDGVDGDGDVLNRSWDVESRYRLQESALNLPR-EKTAALFRVQVELGLHELTAAMSSLSRRIDKLEENTAPPEKEQQDQAVKELARSARCISQALPGIASGRTRRRALHGYFRESDEQRSNCGDRIDPATRALVVEGLASLAGKVRVNTGLGDKDDGGGLGSRSGENSSSRGLSPSSPGRRKSRTRPKKEKGGKVWERVEKGLAEVMASKYFRDIGGHGHPRGLGSVSGTSFPSQEKSTPPRGYAPEG 974
            MS+  RP+Y++ G + +   L++SWD ESR+RLQE+AL+LP  E   ALFRV+VELGLHELTAA++SLSRRIDKLEENTAPP+ E+QD+AVKELARSARC+SQALPGIAS RTRRRALHGYFRE DE+R   GDR DPA RALV+EGLA LAGKVRV T  G K +GGG+ S +    ++RGLSPS P R+K  T     + G V    EK L  V++    RD GG G  R L   S   F S      P+G+APEG
Sbjct:    1 MSETPRPSYVEYG-EHEKKSLSKSWDAESRFRLQENALSLPTGEDDTALFRVKVELGLHELTAALTSLSRRIDKLEENTAPPDTEKQDEAVKELARSARCLSQALPGIASARTRRRALHGYFREGDEKRGGYGDRNDPAARALVIEGLACLAGKVRVETARG-KANGGGVWSST--TRATRGLSPS-PRRQKQSTHSSVGETG-VASEEEKMLQGVIS----RD-GGDGDTRMLAPASERDFSSLRTLALPKGFAPEG 247

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig766.30.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig766.30.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JIA0_9PHAE	6.980e-140	39.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDJ2_ECTSI	1.190e-62	59.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig766	contig	P-littoralis_Contig766:106562..114439 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3563
Hectar predicted targeting category	other localisation
Exons	6
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-15_000360.1
Cds size	3135

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig766.30.2	prot_P-littoralis_Contig766.30.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig766 106793..114242 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791581.317889-UTR-P-littoralis_Contig766:106561..106792	1680791581.317889-UTR-P-littoralis_Contig766:106561..106792	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig766 106562..106792 -
1680791581.4113877-UTR-P-littoralis_Contig766:114242..114439	1680791581.4113877-UTR-P-littoralis_Contig766:114242..114439	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig766 114243..114439 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791581.333246-CDS-P-littoralis_Contig766:106792..107734	1680791581.333246-CDS-P-littoralis_Contig766:106792..107734	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 106793..107734 -
1680791581.3479962-CDS-P-littoralis_Contig766:108623..108752	1680791581.3479962-CDS-P-littoralis_Contig766:108623..108752	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 108624..108752 -
1680791581.3583071-CDS-P-littoralis_Contig766:109049..110688	1680791581.3583071-CDS-P-littoralis_Contig766:109049..110688	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 109050..110688 -
1680791581.3683605-CDS-P-littoralis_Contig766:111356..111459	1680791581.3683605-CDS-P-littoralis_Contig766:111356..111459	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 111357..111459 -
1680791581.382413-CDS-P-littoralis_Contig766:112164..112277	1680791581.382413-CDS-P-littoralis_Contig766:112164..112277	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 112165..112277 -
1680791581.4011219-CDS-P-littoralis_Contig766:114033..114242	1680791581.4011219-CDS-P-littoralis_Contig766:114033..114242	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig766 114034..114242 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig766:106562..114439-
coding sequence from alignment at P-littoralis_Contig766:106562..114439-

protein sequence of mRNA_P-littoralis_Contig766.30.2

>prot_P-littoralis_Contig766.30.2 ID=prot_P-littoralis_Contig766.30.2|Name=mRNA_P-littoralis_Contig766.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1045bp
MVMSQRSRPAYLDDGVDGDGDVLNRSWDVESRYRLQESALNLPREKTAAL
FRVQVELGLHELTAAMSSLSRRIDKLEENTAPPEKEQQDQAVKELARSAR
CISQALPGIASGRTRRRALHGYFRESDEQRSNCGDRIDPATRALVVEGLA
SLAGKVRVNTGLGDKDDGGGLGSRSGENSSSRGLSPSSPGRRKSRTRPKK
EKGGKVWERVEKGLAEVMASKYFRDIGGHGHPRGLGSVSGTSFPSQEKST
PPRGYAPEGGFASERLQVEHLDGPGPSLPQSPIAMAGSACGEAFPCASVP
IWAGDGSSRKTKRERRRAGCAELGEPGGRHGQRHRQPSASESTSSKTASQ
HDSSSVAPDVNQPGGQPRAAAICHAASGSATTGFGGATAEAASAGGRVLK
DAGGVVQGNEENTAGAGHFESVVECSGRPNDSGERITVRASTRARGAVGK
TAVFAGSRNSNDNNSSSNNIGNNNHNKPVGGSDTEADPDLIARVLLNAAR
VAVETEERAGGPGSHEERQGLAGSRAYDGDGGGCGGSTPRVEGNKDSRAE
IEAVRALSSHVRSRASLVSSSSSSPPSSCPAAAAGAAVRAKTVAAAGADA
KGAEGDDKVAGGTKTGGMEASLSGSFGTARPRRSSLGAGGGRQRLTDGAQ
RLSLGLGGGGPVVDAQGFLDLGAASAEEKSLAVHTDVQEKRPKRSEPNRS
DSSGSDPRVAELEEKLEEIRRIGERLKQEKEAALTAEPSVTIPDQDLTDL
DFFLHHARSWNNNTLDSPHASSSLRHQQLDPVLRSGRAARGAASHSAFTS
AESSPRRTAEDLSSAAEAPPNPDHHAAAEPALSRLLAPPFNNAELRGDFI
TSLERHLAEYEDRGNAEIEADEPDDNGACCAKDGRDKGVQGDRGKRESDG
KGDGQRARHDCGGGDDRAKTRDADGNDNSDGVDSSSTPQTTHTVKEMPLG
PRAGNQPGSRRAVETALINTNQPASTNVGEVETHNVEVEGAPVGALRGEV
RDRETDGKKKAVLQETPNGSSKGGGGSSSTWAQEYHDYLCSKDP*

mRNA from alignment at P-littoralis_Contig766:106562..114439-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig766.30.2 ID=mRNA_P-littoralis_Contig766.30.2|Name=mRNA_P-littoralis_Contig766.30.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7878bp|location=Sequence derived from alignment at P-littoralis_Contig766:106562..114439- (Pylaiella littoralis U1_48)
GGTGCAGCAGTTGGGTCTCGTGGGGTAAGTGTGCGAAAGAGGAAAAAAGC
CGAAAAAGCTCCATCAGCGGGAGTGCCAAAGAATATGAGGCGGTTTCATT
GAACATCGGGGACGGCATCATTTCAGCCCTGCGCCAAAAGGCACAGCCCA
CAACAGCGCCGTTTAGATCTCTCTCTCTCTCTCACTCTGGTGGCCGCATG
GTCATGTCTCAACGCTCGAGGCCGGCCTATCTGGACGATGGAGTTGACGG
AGATGGAGACGTGCTCAACAGGAGCTGGGATGTAGAAAGTCGGTACCGCC
TCCAAGAGAGCGCTCTAAATCTGCCGCGCGAAAAGACGGCCGCGTTGTTC
CGGGTGCAGGTGGAGCTTGGCTTGCACGAGTTAACCGCCGCCATGAGCAG
CCTTAGGTGAGATCGGGATGAAGATCGGTTGCTGTGTTTCTGCTGCTTGC
CGGGCTTCCTACACGCCCGTGCATAAGCTTTGATGTGGTTGGTGAGCGAT
GTGTTGGAAATAAATGAGCGCACCTTTAATCTGGTACTTCGTACTGGAGC
ATATACTAAATGCAGTACTGTGCGAGCTGCTGTATGGTCCCATTGCTGTA
ATCACGATGATAGTCGTACACATGGTGCCGCAGATCTTCGTGGGATGCTC
CCTGGTGGTGCCGGTGCAGCAGTTTAAGATACCAGTGTGGTCTAGATACT
GTATGATGTCATGGATGCTATCTCCGAGCTGGCCTTTTTCTGGTGTTCTG
CTGCTGTTGTTGTGGCGGTGTCCCGTACCAGATACGATACCCGATACCTG
TGGTGCAGCAGTACGCAGCAGGTTGTGATGAAATTGTTAACCGACATGCA
GCGCCGTAGCAATCTCAGTTGTGCCGGCAGGATTTATCGTTACATTCAAC
TCAAAGTGCAAGCTTACCGTACAACCTATACCCGCAGGAGACCTCAGCAA
GATACGGCAGTATCAGTGCACAATGTGTGTGTTCTCATTCCACCTTCTCT
AGACGCCAGTCTGCACCTTTCTTGACTTTACGAGGGAGGGCGCACCAGCC
GGGGTTATAAAGAAGACGGATCGATGCAGGAGTTTTTTTCGGCCTTCCTT
CTGCAGTGCCTATGCAACAGCAGCCAAGCGGTACATGGGCAGGGCACTGA
ACGTCATTCGCGTTTCGTGTTGCAAAATATACGCAAAAGACATTGGCATA
CTCAAAGGGTATTTGGTGCCACCATTTTCGTGGTTTCTGTTGCTCTTTTC
TCATGGACCGAGCCCGCGGTCTCAAAGCGGGGCACAAAAAAAGGAATAAC
AAGAAAGTGTTGAATACGCACCTTTAGAAATGAATAACCGAAAACGGCGC
CCACGGCTGAAGTTCTTTAACTAACGGATTGAAAAAAATCTTTGGAGAGG
GAAACTGAAAAATACGAAGGCCTCGCAACTCTCAAGAAACCTAGGCAGCA
GGTACAGACATCCTGAGGCGCAAAGCAGGTGGAAGATATCGGAGCTTGAA
CTGCACCGGGGAGTTGAAGGCTGCTGAGATGCAGTGAGGGACAAGAGGTC
GCACCGCTGTGGTTTTCGCGGGACGGCATTTTGGGATAAGAAACAGCCCC
CGGAAAAAGTGCACCCTAAATGTTTTCTGTGGACCGATTCAAACCAGGGT
TCCGCCGCATGCTTTGCCACGTGCAAGAGAGTTCCGCGTGAGGAGGTTCT
CTTGGAAATCGTGGCAAAAACAGGTGCCACGCTTTTTCGAAAATCGAAGA
TTTCTCGAGCCACAGACCTCCAGCTCAGGGTTCTACCGAACGCTCCTATA
CCCCTCTGCGTTTTTTGTCTTTGGCTAGACACACACACACTCACACACAC
ACACACACGCACATGTTACCTGCCCCCTGGGACAGCTGCCGACCATGAAC
TGTTCATCGGTAGCTTTCTCTGTTTACACCGCCGGACGTTTATTTGCACC
TTACGACGAACAAGGTTTTTCCCCCTTCCCCACCCCAAAAGTCTCGTGAC
AGCCTGTATTTCTTCCGCACACAGCAGACAGCAGTATATGTACCGTCGTT
CTGCAGTTTATTGACCCTTTGCTAAACAACCGCGGCAGTCATAACGGCGG
ACCCATCTACAAGTGCCGCTGAATGAACTCGTCGGCATTGCCTTTTTTTT
TGTCCTGCACAGCCGCCGAATCGATAAACTGGAGGAAAACACAGCCCCTC
CCGAAAAGGAGCAGCAAGACCAGGCGGTCAAGGAGCTGGCGCGCAGCGCT
CGTTGCATTTCCCAAGCCCTGCCAGGTGCGTCCTCTCTCTCTCTCTGTCT
TTATCTCTCTCATAGCTCGAAATATCGCCATGGCTCTCTCTTTCTTCAAG
CAGCAGCTAGATTCGGTCTGATTACGGGTTGTTCTTCGTCCACGGCTATG
CTCGATACATTATTTCACATCAGCAGCTGTTGCCCTCCCTCTTGCTCGAA
ACACCAGCGAGTTTCGGTTTTTGTGACCGTTCGTCGCGTCGGCCTGATTT
ACCGCCTTGCGCGCCGTAGTTTCCCACTTCACGCAAGCAGCGCCGGTATT
ATCTTCCGAAAGTCCCGATCACGACGCCTGCAGGTTTTCCGCTCTATCTT
CATCATGATCAAATAAAACCAAGACCAAATATGATGGAACCTGCCTTCTT
AACCTCGAGCGGTGCTCCAAATTCAAAATTTCAAAAAACAAATTTTCATA
AGTTCTGACCCCCTGGTAGAGAACGCCTGTCTTTGTCGTAAAGGAAGGAA
GGGATCTGCCTGCTTGCTTCACGCGCCTACTGACATGTTCCGAATGCCAG
GGATCGGCAAGTTCTCTCTCGTCACGTCCCAGCCCCGCTGAGCAAATATT
CCCACCCTTGTTCGTTTGTCGATGTCTGACGTCGAGATGACGATACATTC
ATCTTTGTCGGAGTGGTTAACGACTTTATATTTCACACTGTCGCCGGTGG
GACCAATACACCACATGCGAACGAGTGCAGGTATCGCGTCGGGACGGACA
AGGCGGCGCGCCTTGCACGGCTACTTCCGCGAGAGCGACGAACAGAGAAG
CAACTGTGGAGACAGAATAGACCCCGCCACCAGGTGCACCAGGAGTTCAC
GATGATGATGATGATGATGATGATGATGGTGATGATAGTGGGACAAGCAG
CTGCTGACGATGGTGCTGGTAGTGGTCGCTGGCGATAGTGGCGTGACATT
GTTCGCTGAGTGTGCCATTTGGCCCTCTAATATGCTACCGCCCCAGCCAA
ACGTATCGACGCGAAGGTCAAACTGCTGAGGTATTCGAAAGGCATGGCAA
ATGCGATACCCCAATAGACCTCATGCCTAATGAGTATTCTTGCAGAGGTT
CAGTTCGGATGAAACCCGGGGTATCACCGCGTTGTTTGCCACAGCGTATT
TACCCGCTGTGACTCGGATGAGAAAGATCTACGTACCTCACGACTCCCCG
TGTCGATCCAACGCATGTCTGGGACAGGCACTCGAAACGGGTTGTGGATG
CCATCTCGCTGCAGTAGCAAAGCGACAAGAGACAGTTTGCTTTCGTGCCC
CCAGCTTTCTGGTCGCAATAAGCACCAGGGTTTTGGTGTGACATCATCGG
CGCACCCACCGCACGGCCGTCAACAGCGCGCAACAAGAGCCTTCTCGCGA
TACGCAGAAACAATACGCTACCACGCCGCCTACCGTTTCTTATCAAACCT
CAATGTACCCCCCCCCCCTCCCTTCTCCCCCCGAAATGATACTGGCTCTA
GAGCTCTCGTCGTGGAAGGTTTAGCAAGTCTGGCGGGAAAGGTCAGGGTC
AATACGGGATTGGGTGACAAGGATGATGGCGGAGGGCTGGGATCGAGGTC
GGGAGAAAACAGCTCGAGCCGCGGCTTGAGCCCGTCGTCTCCTGGCCGCC
GAAAATCTCGGACACGGCCTAAGAAGGAAAAAGGGGGTAAGGTGTGGGAG
AGGGTGGAGAAAGGTTTGGCTGAAGTGATGGCGAGCAAGTATTTCCGTGA
TATCGGTGGTCATGGGCACCCGCGAGGGTTAGGGTCTGTGTCGGGCACAA
GCTTCCCTTCTCAGGAGAAGTCCACTCCGCCGAGAGGGTACGCCCCGGAA
GGAGGCTTTGCTTCGGAAAGGCTTCAGGTCGAGCACCTCGACGGCCCTGG
GCCTTCGCTTCCGCAGTCGCCTATTGCGATGGCTGGATCCGCGTGTGGGG
AAGCGTTTCCGTGTGCCTCCGTGCCGATTTGGGCAGGGGATGGCAGCTCA
AGGAAAACAAAAAGAGAGAGGCGCCGTGCAGGATGTGCGGAGCTTGGCGA
GCCTGGTGGCAGGCACGGCCAGCGGCACCGACAGCCCAGTGCTAGCGAGA
GCACGAGTAGCAAAACTGCCTCTCAGCATGACTCGAGCTCTGTGGCCCCT
GACGTCAACCAACCTGGAGGCCAACCGCGCGCAGCTGCTATTTGTCATGC
TGCAAGTGGCAGTGCCACCACTGGGTTTGGCGGAGCCACCGCAGAGGCTG
CGAGTGCTGGAGGTAGAGTTCTTAAAGACGCAGGCGGCGTCGTTCAGGGA
AATGAGGAAAATACTGCAGGCGCTGGTCATTTCGAAAGCGTGGTCGAATG
TTCTGGAAGGCCCAACGATAGCGGCGAGAGGATCACTGTCCGCGCGAGCA
CCAGAGCACGAGGCGCTGTCGGGAAAACAGCCGTGTTTGCTGGAAGCCGC
AACAGCAATGACAACAACAGCAGCAGCAACAATATCGGCAACAACAACCA
CAACAAGCCTGTCGGTGGTAGTGATACTGAGGCGGACCCAGACCTGATTG
CCAGAGTGCTTTTGAACGCCGCCCGAGTAGCAGTCGAGACCGAAGAACGT
GCTGGGGGTCCGGGAAGCCACGAGGAGAGGCAAGGCCTTGCCGGCAGTAG
AGCATACGACGGTGATGGTGGTGGCTGTGGTGGCAGCACCCCACGCGTCG
AGGGGAACAAAGACTCTCGTGCGGAGATAGAGGCGGTTCGCGCCCTAAGC
AGCCACGTGCGCAGCCGGGCATCACTCGTATCCTCGTCATCTTCCTCGCC
GCCGTCGTCATGTCCTGCTGCCGCCGCTGGTGCGGCCGTCAGGGCAAAGA
CGGTAGCCGCAGCTGGAGCCGACGCTAAGGGCGCAGAGGGCGACGACAAG
GTGGCGGGAGGAACAAAGACAGGTGGCATGGAGGCGTCATTGTCTGGCTC
GTTCGGTACCGCTCGCCCGCGGCGGTCTTCGTTGGGTGCTGGTGGTGGCC
GGCAGCGTTTGACGGATGGCGCACAGCGGTTGTCGCTGGGTCTAGGTGGC
GGAGGGCCGGTCGTGGACGCACAAGGGTTCTTGGATTTAGGGGCTGCTAG
CGCCGAAGAGAAAAGCCTGGCTGTGCATACGGATGTCCAGGTAAGAATGC
TGTTCGGGCTCGTTTTGTTTTGCCCTCTAGTTGTTTTTTTTGTATATTTT
TGCGGCTGTGATGTTTCTCTTGCCCTTGTATTTGTCTTCTTTTTTTTGCG
TCACTGAAATTGCTGGCGTCCTGGCGTTGGTGTCGGTCGTATGATTGTGG
TGCTGTTGTCGCATTCTTTACCCGGCCGTACTTCATCGCTTTGTGTGGTT
CTCGCCTCACAGAGGACCAGTTTCGGACTCCCGAATTTTCCTCGCAAATG
TTTTTCGTGCTGGAACTCTCGCCTTCGGTGACCGCAGGAGAAACGCCCGA
AGCGTTCTGAACCGAACCGCTCTGATAGCAGCGGCTCCGACCCCCGAGTG
GCCGAGCTAGAGGAAAAGTTGGAGGAGATAAGGAGGATCGGAGAGAGGCT
CAAGCAGGAAAAGGAGGTATAATGTCGGCGCCTGCTTGGTGTTCTGTAAC
TTGCCTCATTGCTTATCCTCTCTTTGATTTATCCTTTTTTTTTTCAACCG
TGATTTTTCCTCCTCAGATCATTTTTGTCCCCGACCCCGCGCAACCGTCC
GCTTGCGCCGGAACTTCTTGAACCAACGTGGATCCACACCAGTCAGTGCT
GCAGACGTCGCGCGTGATCATTGCGAATGAGTAGGGGTTTTCGTTGGCCT
TGTCACGCTCTATGTCCGAAGCCGGCTGACCTTTCAGTGCGCAGGACGGG
CGTCACGGGTATCATGTGTGTCGCGAAGTTTTTATCGAAACGCTTGTGCG
TGTGATCGCTTTTTCTTAGGGATTGTGTCATTTTTTTGCCGCTTTCAAAC
ATCGCGCTCGGTTTCGGGTCATTGCGTAAGTCGAATATTATTTCCAGCCG
GAGGTGCGCTGAGGTGTCATGGTGAATGGTGTGGACAGAGCTATTGATAT
TCGCCTGCGATAACCAACGTCTTCCCTCACTGATATGAATAGGACCGAAA
AAGGAATCACTTGATCGCAGAGTCCAAAATGTGTGTGAAGATAGCAGCGG
CGGCAACAGTAGTTTGATATGCCGGGCGGTCCCGACAGCAAGCAAGCGTT
CTGGCAAAAGAGCTAGCGTTGAGCGTGGATCTAGGGCACCCGAGTTTGCC
TACGTTACGAACAGCCAGATCTCCGTTTGCATGTCAGGAGATCGGAGGAA
CCTAACAGAGTGTCCCTTTTTCTTCCTTTCATGTTGTTTAACGTGTGCAT
AATGAATGCTTATGACGCCCCCCCGATAGCCGTCGCCCACACTTCTCTCA
TATTCTCGCGCGACCCCTCACGCCCATTTCACGCCTCGCGCCTGACTCGG
TTTAGGCGGCTTTAACGGCCGAACCAAGCGTGACTATTCCCGACCAAGAC
CTCACCGACCTCGACTTCTTCCTACACCATGCTCGCTCTTGGAACAACAA
TACCCTGGACTCGCCGCATGCGTCATCGAGCCTTCGGCATCAGCAGCTCG
ACCCGGTACTTCGTAGCGGGAGAGCCGCCCGCGGAGCCGCCTCTCACTCC
GCCTTTACCTCAGCGGAATCATCTCCGAGACGAACCGCAGAAGACCTATC
ATCGGCTGCCGAAGCACCCCCGAATCCTGACCACCACGCGGCAGCAGAGC
CGGCGCTATCGCGTCTGCTGGCACCGCCGTTCAACAACGCGGAGCTGCGA
GGGGACTTCATCACGTCTCTTGAACGGCACCTCGCGGAGTACGAGGATCG
TGGGAATGCCGAGATCGAAGCGGACGAGCCAGACGACAACGGTGCCTGCT
GCGCCAAAGATGGTCGCGATAAAGGAGTCCAAGGTGACCGTGGCAAACGG
GAGAGTGATGGCAAGGGTGACGGCCAGAGGGCACGGCATGACTGCGGTGG
TGGCGATGATCGGGCCAAAACAAGAGATGCGGACGGCAACGACAACAGTG
ATGGCGTCGATAGTAGCTCTACTCCCCAAACAACACACACCGTGAAAGAA
ATGCCGTTGGGGCCAAGAGCTGGTAACCAACCGGGGTCACGCAGAGCCGT
TGAGACCGCATTGATAAATACGAATCAGCCCGCATCGACAAACGTTGGCG
AGGTCGAGACACATAACGTGGAGGTTGAAGGCGCTCCGGTTGGCGCGCTC
CGGGGAGAGGTGCGAGATCGGGAAACAGATGGGAAGAAGAAAGCGGTTCT
CCAGGAGACTCCGAATGGCAGCAGTAAGGGTGGTGGGGGGAGCTCATCCA
CCTGGGCCCAGGAATACCACGACTACTTGTGCAGCAAAGACCCGTAGACG
AGTGTACCACGATGTTGCGAGGCACTGTCGTGTCGGGGAATGGGCTGTTT
TTCTCGCTTTTTGCTTTGCTTATTGTCATATTTTCGGTGTGATTCTGATG
GACGTGAAATAATGTGGCCTGGAAATAATTTTTGGCTCGAAAAGTGTGGC
AGTTTTGTTCTCTGTCGTCGATGATTCCACCGAGAGGTGTGTGTGAGATT
CAACTCAAGCTTTTGGCGGAGCGCCGCA

Coding sequence (CDS) from alignment at P-littoralis_Contig766:106562..114439-

>mRNA_P-littoralis_Contig766.30.2 ID=mRNA_P-littoralis_Contig766.30.2|Name=mRNA_P-littoralis_Contig766.30.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3135bp|location=Sequence derived from alignment at P-littoralis_Contig766:106562..114439- (Pylaiella littoralis U1_48)
ATGGTCATGTCTCAACGCTCGAGGCCGGCCTATCTGGACGATGGAGTTGA
CGGAGATGGAGACGTGCTCAACAGGAGCTGGGATGTAGAAAGTCGGTACC
GCCTCCAAGAGAGCGCTCTAAATCTGCCGCGCGAAAAGACGGCCGCGTTG
TTCCGGGTGCAGGTGGAGCTTGGCTTGCACGAGTTAACCGCCGCCATGAG
CAGCCTTAGCCGCCGAATCGATAAACTGGAGGAAAACACAGCCCCTCCCG
AAAAGGAGCAGCAAGACCAGGCGGTCAAGGAGCTGGCGCGCAGCGCTCGT
TGCATTTCCCAAGCCCTGCCAGGTATCGCGTCGGGACGGACAAGGCGGCG
CGCCTTGCACGGCTACTTCCGCGAGAGCGACGAACAGAGAAGCAACTGTG
GAGACAGAATAGACCCCGCCACCAGAGCTCTCGTCGTGGAAGGTTTAGCA
AGTCTGGCGGGAAAGGTCAGGGTCAATACGGGATTGGGTGACAAGGATGA
TGGCGGAGGGCTGGGATCGAGGTCGGGAGAAAACAGCTCGAGCCGCGGCT
TGAGCCCGTCGTCTCCTGGCCGCCGAAAATCTCGGACACGGCCTAAGAAG
GAAAAAGGGGGTAAGGTGTGGGAGAGGGTGGAGAAAGGTTTGGCTGAAGT
GATGGCGAGCAAGTATTTCCGTGATATCGGTGGTCATGGGCACCCGCGAG
GGTTAGGGTCTGTGTCGGGCACAAGCTTCCCTTCTCAGGAGAAGTCCACT
CCGCCGAGAGGGTACGCCCCGGAAGGAGGCTTTGCTTCGGAAAGGCTTCA
GGTCGAGCACCTCGACGGCCCTGGGCCTTCGCTTCCGCAGTCGCCTATTG
CGATGGCTGGATCCGCGTGTGGGGAAGCGTTTCCGTGTGCCTCCGTGCCG
ATTTGGGCAGGGGATGGCAGCTCAAGGAAAACAAAAAGAGAGAGGCGCCG
TGCAGGATGTGCGGAGCTTGGCGAGCCTGGTGGCAGGCACGGCCAGCGGC
ACCGACAGCCCAGTGCTAGCGAGAGCACGAGTAGCAAAACTGCCTCTCAG
CATGACTCGAGCTCTGTGGCCCCTGACGTCAACCAACCTGGAGGCCAACC
GCGCGCAGCTGCTATTTGTCATGCTGCAAGTGGCAGTGCCACCACTGGGT
TTGGCGGAGCCACCGCAGAGGCTGCGAGTGCTGGAGGTAGAGTTCTTAAA
GACGCAGGCGGCGTCGTTCAGGGAAATGAGGAAAATACTGCAGGCGCTGG
TCATTTCGAAAGCGTGGTCGAATGTTCTGGAAGGCCCAACGATAGCGGCG
AGAGGATCACTGTCCGCGCGAGCACCAGAGCACGAGGCGCTGTCGGGAAA
ACAGCCGTGTTTGCTGGAAGCCGCAACAGCAATGACAACAACAGCAGCAG
CAACAATATCGGCAACAACAACCACAACAAGCCTGTCGGTGGTAGTGATA
CTGAGGCGGACCCAGACCTGATTGCCAGAGTGCTTTTGAACGCCGCCCGA
GTAGCAGTCGAGACCGAAGAACGTGCTGGGGGTCCGGGAAGCCACGAGGA
GAGGCAAGGCCTTGCCGGCAGTAGAGCATACGACGGTGATGGTGGTGGCT
GTGGTGGCAGCACCCCACGCGTCGAGGGGAACAAAGACTCTCGTGCGGAG
ATAGAGGCGGTTCGCGCCCTAAGCAGCCACGTGCGCAGCCGGGCATCACT
CGTATCCTCGTCATCTTCCTCGCCGCCGTCGTCATGTCCTGCTGCCGCCG
CTGGTGCGGCCGTCAGGGCAAAGACGGTAGCCGCAGCTGGAGCCGACGCT
AAGGGCGCAGAGGGCGACGACAAGGTGGCGGGAGGAACAAAGACAGGTGG
CATGGAGGCGTCATTGTCTGGCTCGTTCGGTACCGCTCGCCCGCGGCGGT
CTTCGTTGGGTGCTGGTGGTGGCCGGCAGCGTTTGACGGATGGCGCACAG
CGGTTGTCGCTGGGTCTAGGTGGCGGAGGGCCGGTCGTGGACGCACAAGG
GTTCTTGGATTTAGGGGCTGCTAGCGCCGAAGAGAAAAGCCTGGCTGTGC
ATACGGATGTCCAGGAGAAACGCCCGAAGCGTTCTGAACCGAACCGCTCT
GATAGCAGCGGCTCCGACCCCCGAGTGGCCGAGCTAGAGGAAAAGTTGGA
GGAGATAAGGAGGATCGGAGAGAGGCTCAAGCAGGAAAAGGAGGCGGCTT
TAACGGCCGAACCAAGCGTGACTATTCCCGACCAAGACCTCACCGACCTC
GACTTCTTCCTACACCATGCTCGCTCTTGGAACAACAATACCCTGGACTC
GCCGCATGCGTCATCGAGCCTTCGGCATCAGCAGCTCGACCCGGTACTTC
GTAGCGGGAGAGCCGCCCGCGGAGCCGCCTCTCACTCCGCCTTTACCTCA
GCGGAATCATCTCCGAGACGAACCGCAGAAGACCTATCATCGGCTGCCGA
AGCACCCCCGAATCCTGACCACCACGCGGCAGCAGAGCCGGCGCTATCGC
GTCTGCTGGCACCGCCGTTCAACAACGCGGAGCTGCGAGGGGACTTCATC
ACGTCTCTTGAACGGCACCTCGCGGAGTACGAGGATCGTGGGAATGCCGA
GATCGAAGCGGACGAGCCAGACGACAACGGTGCCTGCTGCGCCAAAGATG
GTCGCGATAAAGGAGTCCAAGGTGACCGTGGCAAACGGGAGAGTGATGGC
AAGGGTGACGGCCAGAGGGCACGGCATGACTGCGGTGGTGGCGATGATCG
GGCCAAAACAAGAGATGCGGACGGCAACGACAACAGTGATGGCGTCGATA
GTAGCTCTACTCCCCAAACAACACACACCGTGAAAGAAATGCCGTTGGGG
CCAAGAGCTGGTAACCAACCGGGGTCACGCAGAGCCGTTGAGACCGCATT
GATAAATACGAATCAGCCCGCATCGACAAACGTTGGCGAGGTCGAGACAC
ATAACGTGGAGGTTGAAGGCGCTCCGGTTGGCGCGCTCCGGGGAGAGGTG
CGAGATCGGGAAACAGATGGGAAGAAGAAAGCGGTTCTCCAGGAGACTCC
GAATGGCAGCAGTAAGGGTGGTGGGGGGAGCTCATCCACCTGGGCCCAGG
AATACCACGACTACTTGTGCAGCAAAGACCCGTAG