mRNA_P-littoralis_Contig766.27.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig766.27.1
Unique NamemRNA_P-littoralis_Contig766.27.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.740e-178
Identity = 314/431 (72.85%), Postives = 343/431 (79.58%), Query Frame = 1 
Query:  217 VSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGSRDSWYRVKDLLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDGGTPSTGHEPTGGTGAQNGAGSGPSVISSEDMQIAMAISASMGGGEVSKEAGGVSGGGSDEEDQVARAIAXXXXXXXXXXXXXXXXXXXXXXYTPRPVPDLQPNGPDVVRVQLRVGSSGKVVHSFRRSDPLTALLDVAAQALAKSDGKALTAPFDVIAPGGRPLLKAGVIVAAADGGAEAXXXE-AGGEGEEKEISGPTIGSEQLSGASVIVRRA 1506
            +SSLCGQHCINNLVQAASY+AADLADIA +LD QERQHMLA G DTPDALKFLAE+SGNVDAAGNFSIQVL+TALKRLYG +LVSAGSESVG+L TTGYD E AFVLNRHAHWVA+RSIGGAYWDLNSMLDNP RITTFALEAY+HQL++DGYSVFVVRG+DLP  A+EPREGSRD WYRVKDLL++S+GGKGSGG LNTAATDVWLNSGPGQRLDGGT S G    G  G  +G   G  + S+EDMQ+AMAIS                               XXXXXXXXXXXXXXXX      YTP+PVP+LQPNGPDVVRVQLRVG   +VVHSFRRSDPLTAL DVAAQALAK+DGKAL +PFDV+APGGR LLKAGV+V   DGG  A   + AG  G E +  GPTIGSEQL GASVIVRRA
Sbjct:    1 MSSLCGQHCINNLVQAASYSAADLADIALELDDQERQHMLAAGSDTPDALKFLAEESGNVDAAGNFSIQVLNTALKRLYGAYLVSAGSESVGKLSTTGYDVEDAFVLNRHAHWVAVRSIGGAYWDLNSMLDNPTRITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWYRVKDLLEVSRGGKGSGGALNTAATDVWLNSGPGQRLDGGTTSKG---PGKDGRDSG---GAGMTSAEDMQLAMAISXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPAGLYTPQPVPELQPNGPDVVRVQLRVGGGQRVVHSFRRSDPLTALFDVAAQALAKADGKALPSPFDVVAPGGRALLKAGVVVPGTDGGDVATAAKPAGAGGGESDGGGPTIGSEQLGGASVIVRRA 412
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A836CJ83_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ83_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.780e-70
Identity = 124/191 (64.92%), Postives = 143/191 (74.87%), Query Frame = 1 
Query:  196 WVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESV-GQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGS----RDSWY 753
            W+YHEKQ SSLCGQHC+NNL+QA  +TA DLADIAH LDA+ERQ ML  G  TPDALKF AEDSGNVD AGNFS+QVLS AL   YG+ L SAGSE V G+L TTGYD E  FV NR AHW A+RS+GG YW+LNS L+ P  IT++ALEA +HQ + DGYSVFVVRG  LP  ++E   GS     + WY
Sbjct:    3 WIYHEKQESSLCGQHCLNNLLQACIFTAPDLADIAHVLDAKERQLMLELGHSTPDALKFQAEDSGNVDEAGNFSLQVLSEALTLRYGLRLESAGSERVAGKLSTTGYDSEAGFVCNRQAHWFAVRSVGGRYWNLNSTLERPEWITSYALEATLHQYRLDGYSVFVVRGGTLPPPSTEGPYGSDAGNAEDWY 193
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S2SLM5_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLM5_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.930e-50
Identity = 106/241 (43.98%), Postives = 144/241 (59.75%), Query Frame = 1 
Query:  157 ISDMAGSTPDEDLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGN----DLPAAASEPREGSRDSWYRVKDLLQLSKGGKGSGGTLNTAAT--DVWLNSGPGQRL 861
            + ++  S    D WVYHE+Q S+LCGQHC+NNL+Q   ++  DLADIA ++D  ERQ ML  G  TP+ALKFLAEDSGNVD +GNFSIQVL  AL+R + + L   G+ S+       +D   AF+ N+  HW  +R + G YW+LNSML+ P +++ F L A++ QLQ DGY VF+V       D P    E   G+   ++ V  L   S+ G  +G +   A    D W  +G GQRL
Sbjct:    2 LPEVLSSASMADGWVYHERQESALCGQHCLNNLLQGTYFSPGDLADIAAEMDRLERQMMLEMGDATPEALKFLAEDSGNVDESGNFSIQVLKRALERSHELVLDHVGATSLEGQDLLSHD---AFICNKSNHWFTVRKLYGLYWNLNSMLERPEKVSDFYLSAFLMQLQADGYDVFIVSPGANLPDPPHGGPEAGMGAASCFHTVSSL---SRSGSTAGSSTAAAGEQKDPWAMAGEGQRL 236
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S1U677_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U677_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.090e-45
Identity = 91/203 (44.83%), Postives = 129/203 (63.55%), Query Frame = 1 
Query:  187 EDLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGSRDSWYRVKDLLQLSKGGKG 795
            + L VYHE+Q+++LCGQHC+NNL+    +T   LA++A +LDA+E + MLA G  T DA +F+A+ SGNVD AGNFSIQVL+TA+ R +G+ LV + SE +            AFVLN+  HW+ +R  G  + DLNSM D P  ++ F L A++HQL  DGY++F V G +LP    +P  G    ++ +  LL+ S G  G
Sbjct:    3 DGLLVYHERQLAALCGQHCLNNLLGGPYFTEFQLAEVAQELDAREAELMLAGGAGTEDARRFMAQPSGNVDEAGNFSIQVLNTAVSRSHGLSLVPSESEGLTGRVDADPSQFQAFVLNQSQHWITLRRYGDTWLDLNSMHDKPRVVSAFYLSAFLHQLVADGYNIFCVEG-ELPPPLQDPTMGDPSCFHVLASLLEGSGGAGG 204
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S2LJI3_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJI3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.910e-44
Identity = 114/272 (41.91%), Postives = 150/272 (55.15%), Query Frame = 1 
Query:  196 WVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAE---GCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPR--EGSRDSWYRVKDLLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDGGTPSTGHEPTGGTGAQNGAGSGPSVIS--SEDMQIAMAISASM 990
            WVYHE+Q + LCGQH +NNLVQA ++T   LA+IA  LD  E  +M      G  + D LK LAE SGNVD +GNFSI+VL +AL   Y + L +   + + +++ T  DG   F+ NR AHW AIR I   YW+LNS L+ P  I+ F L A V  LQ  GYSVF V  +  P   +E    +G    W++ +DLL      KG    + T A D W + G G+RLDGG  S+            GAG     IS  SE+  + MA+ AS+
Sbjct:    4 WVYHERQEAMLCGQHALNNLVQANAFTPVSLAEIAGQLDQMELNYMANNNEGGVSSKDYLKRLAEGSGNVDESGNFSIEVLRSALLSRYNIELPNIRQQGLSKVEVTTMDG---FICNRSAHWFAIRKINDRYWNLNSTLERPEVISHFRLAAEVEALQNSGYSVFCVVDSLPPPCTNEAMMDQGLPKYWWKEEDLL------KGKTNAM-TRADDPWKDVGSGRRLDGGKKSS-----------VGAGQQSKPISEMSEEEMLQMAMEASL 254
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S1C243_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C243_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.570e-42
Identity = 104/244 (42.62%), Postives = 139/244 (56.97%), Query Frame = 1 
Query:  184 DEDLWVYHEKQVSSLCGQHCINNLVQAAS-YTAADLADIAHDLDAQERQHMLAE---GCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQ-LKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPRE---GSRDSWYRVKDLLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDGGTPSTGHE 891
            D  +W+YHE+QV++LCGQH +NNL Q  S ++ + LA IA  LDA E  +M      G  + D LK L+E SGNVD AGNFSIQVL  AL+  YG+ L +   + VG  ++ T  +G   F+ NRH+HW AIR I G +W+L+S  + P +I+ F L   +  LQ  GYSVF V    LP A++   E   G+ + W+    L++    G G  GT      D W N G G RLDG T S   E
Sbjct:    2 DGVIWIYHERQVAALCGQHALNNLCQTPSAFSVSSLAHIAEQLDAVEMTYMAQNNEGGTRSKDYLKRLSEGSGNVDEAGNFSIQVLRAALENRYGLSLPNIQQKGVGDSVEVTELEG---FICNRHSHWFAIRKINGRFWNLDSTKERPEQISHFKLATEIEGLQNGGYSVFCVIDGPLPPASTTMEERSLGNPEYWWNEAHLVK----GNGVNGTA-----DPWKNVGSGTRLDGKTSSNSSE 233
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A1E7EUB1_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUB1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 5.890e-42
Identity = 100/239 (41.84%), Postives = 137/239 (57.32%), Query Frame = 1 
Query:  184 DEDLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAE---GCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGET-AFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGS---RDSWYRVKDLLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDGGTPS 879
            + + W+YHEKQ + LCGQH +NNLVQA +++A  LA+IA+ LD  E  +M      G ++ D L  +AE SGNVD +GNFSI+VL +ALK  Y + L +  ++ V +    G   E   F+ N+ AHW AIR I G +W+LNSM + P  I+ F L   +   Q  GY+VF V    LP+A +     S      W++  DL+      KG G    TAATD W  +G G RLDGG+ S
Sbjct:    4 ETEYWIYHEKQQALLCGQHALNNLVQANAFSAGQLAEIAYQLDQMELDYMAQNDEGGRNSKDYLNRIAEGSGNVDPSGNFSIEVLRSALKTKYSLDLPNVLAKDVNERFGVGDVTEMEGFICNKDAHWFAIRMINGRFWNLNSMDERPKIISHFKLATEIAGFQSSGYTVFCVP-KGLPSACTTKAGSSVGLPQYWWKEDDLV------KGKGKDAVTAATDTWRTAGSGMRLDGGSTS 235
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S4DEZ6_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEZ6_HETAK)

HSP 1 Score: 160 bits (404), Expect = 1.050e-41
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 1 
Query:  190 DLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARI 624
            + W+YHEKQ S LCGQHC+NNL+Q   + A  LA I  +LDA+ER+ ML  G DTP+AL+FLAEDSGNVD  GNFS+QVL+TAL++ +G+ L++ G   +       Y  E  FV NR AHW AIR +G  +W+LNS L+ P  +
Sbjct:    9 ETWIYHEKQFSLLCGQHCLNNLLQGPYFDAPGLAQIGQELDAEERRVMLEAGADTPEALRFLAEDSGNVDETGNFSVQVLNTALEKSHGLTLLNTGRRELRD-SIRDYTKEEGFVCNRSAHWFAIRRVGRYWWNLNSTLERPEHV 152
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S4ANM2_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ANM2_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.450e-41
Identity = 96/237 (40.51%), Postives = 131/237 (55.27%), Query Frame = 1 
Query:  175 STPDEDLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAE---GCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQL-KTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPR--EGSRDSWYRVKDLLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDG 867
            ++ + + W+YHE+QV  LCGQH +NNLVQA  +    LA+IAH LD  E   M      G  + D +  +AE S NVD +GNFSI+VL  AL+  YG+ L +  ++ V      T ++G   F+ N+ AHW AIR I G +W+LNSM + P  I+ F L   +   Q  GY+VF V     P   +E +  +G    W++  DL+      KG G    TAATD W N G G RLDG
Sbjct:   28 NSDETEYWIYHERQVGLLCGQHALNNLVQANVFQPQSLAEIAHQLDRMELNFMAENNEGGIRSKDYINRVAEGSANVDESGNFSIEVLRAALRSKYGLDLPNVMAQGVSDFGDVTEFEG---FICNKDAHWFAIRMINGRFWNLNSMKERPEIISHFKLGTEIAGYQNSGYTVFCVPSGLEPPCKTEAQRQQGLPQYWWKEDDLV------KGKGKDAVTAATDTWSNVGSGMRLDG 255
[Close]
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Match: A0A7S0SUA2_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUA2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 7.930e-41
Identity = 82/193 (42.49%), Postives = 117/193 (60.62%), Query Frame = 1 
Query:  196 WVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDAQERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHLVSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNPARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGSRDSWYRVKDLLQ 774
            ++YHE Q SSLCGQHC+NNL+Q   +T+ DLA+IA  LDA+E Q++  +  +  +  +F+ E SGNVD +GNFS+QVL  ALK L+ + L+S  SE  G+L       E  F++N   HW  IR I   +W+LNS +  P +I+ F L A++ QL  +G SVFV RG   P   S         WY + +L++
Sbjct:    4 YIYHELQESSLCGQHCLNNLLQEPYFTSIDLAEIAQQLDAKELQYLTEDNDNQMNINRFINEGSGNVDNSGNFSLQVLKEALKSLHNIDLISWTSEE-GRLDIIDPTIEEGFIINHSQHWYTIRKINDIWWNLNSTIQVPEKISPFYLSAFLSQLINEGSSVFVARGKIPPQKTSRGITSDNCKWYHIDELIK 195
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig766.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI1.740e-17872.85Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ83_9STRA1.780e-7064.92Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SLM5_9STRA4.930e-5043.98Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina ma... [more]
A0A7S1U677_9STRA6.090e-4544.83Ubiquitinyl hydrolase 1 n=2 Tax=Phaeomonas parva T... [more]
A0A7S2LJI3_9STRA5.910e-4441.91Ubiquitinyl hydrolase 1 n=1 Tax=Skeletonema marino... [more]
A0A7S1C243_9STRA1.570e-4242.62Ubiquitinyl hydrolase 1 n=1 Tax=Corethron hystrix ... [more]
A0A1E7EUB1_9STRA5.890e-4241.84Ubiquitinyl hydrolase 1 n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4DEZ6_HETAK1.050e-4152.41Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heteros... [more]
A0A7S4ANM2_9STRA3.450e-4140.51Ubiquitinyl hydrolase 1 n=1 Tax=Pseudo-nitzschia a... [more]
A0A7S0SUA2_9STRA7.930e-4142.49Ubiquitinyl hydrolase 1 n=1 Tax=Chromulina nebulos... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig766contigP-littoralis_Contig766:81159..90472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDJ5
Preferred nameATXN3
PFAMsJosephin,SUIM_assoc,UBX,UIM
Model size3315
Max annot lvl2759|Eukaryota
KEGG koko:K11863
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001012,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006325,GO:0006464,GO:0006476,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007267,GO:0007268,GO:0007275,GO:0007399,GO:0007610,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010604,GO:0010810,GO:0016020,GO:0016043,GO:0016234,GO:0016569,GO:0016570,GO:0016575,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019899,GO:0019941,GO:0023052,GO:0030029,GO:0030036,GO:0030155,GO:0030162,GO:0030163,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031625,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033036,GO:0033554,GO:0034605,GO:0034641,GO:0034976,GO:0035520,GO:0035601,GO:0035640,GO:0035966,GO:0035967,GO:0036211,GO:0036459,GO:0036503,GO:0042176,GO:0042221,GO:0042405,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045103,GO:0045104,GO:0045732,GO:0045862,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051117,GO:0051171,GO:0051173,GO:0051179,GO:0051246,GO:0051247,GO:0051276,GO:0051603,GO:0051716,GO:0051788,GO:0060255,GO:0061136,GO:0061578,GO:0065007,GO:0070011,GO:0070013,GO:0070536,GO:0070646,GO:0070647,GO:0070887,GO:0070932,GO:0071108,GO:0071218,GO:0071310,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0098732,GO:0098916,GO:0099536,GO:0099537,GO:0101005,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904292,GO:1904294,GO:1904327,GO:1904379,GO:1905897,GO:1905898,GO:1990380
Exons7
Evalue2.13e-188
EggNOG OGsKOG2935@1|root,KOG2935@2759|Eukaryota
Ec32 ortholog descriptionUbiquitin-related domain
Ec32 orthologEc-15_000320.1
Descriptionprotein localization to cytosolic proteasome complex
Cds size1344
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig766.27.1prot_P-littoralis_Contig766.27.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig766 82965..90307 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791580.998365-UTR-P-littoralis_Contig766:81158..829641680791580.998365-UTR-P-littoralis_Contig766:81158..82964Pylaiella littoralis U1_48UTRP-littoralis_Contig766 81159..82964 -
1680791581.1016612-UTR-P-littoralis_Contig766:90307..904721680791581.1016612-UTR-P-littoralis_Contig766:90307..90472Pylaiella littoralis U1_48UTRP-littoralis_Contig766 90308..90472 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791581.0116885-CDS-P-littoralis_Contig766:82964..832731680791581.0116885-CDS-P-littoralis_Contig766:82964..83273Pylaiella littoralis U1_48CDSP-littoralis_Contig766 82965..83273 -
1680791581.0243943-CDS-P-littoralis_Contig766:84421..848341680791581.0243943-CDS-P-littoralis_Contig766:84421..84834Pylaiella littoralis U1_48CDSP-littoralis_Contig766 84422..84834 -
1680791581.03405-CDS-P-littoralis_Contig766:85879..860501680791581.03405-CDS-P-littoralis_Contig766:85879..86050Pylaiella littoralis U1_48CDSP-littoralis_Contig766 85880..86050 -
1680791581.043631-CDS-P-littoralis_Contig766:87487..876801680791581.043631-CDS-P-littoralis_Contig766:87487..87680Pylaiella littoralis U1_48CDSP-littoralis_Contig766 87488..87680 -
1680791581.0527089-CDS-P-littoralis_Contig766:88101..881561680791581.0527089-CDS-P-littoralis_Contig766:88101..88156Pylaiella littoralis U1_48CDSP-littoralis_Contig766 88102..88156 -
1680791581.071506-CDS-P-littoralis_Contig766:88940..890981680791581.071506-CDS-P-littoralis_Contig766:88940..89098Pylaiella littoralis U1_48CDSP-littoralis_Contig766 88941..89098 -
1680791581.084143-CDS-P-littoralis_Contig766:90262..903071680791581.084143-CDS-P-littoralis_Contig766:90262..90307Pylaiella littoralis U1_48CDSP-littoralis_Contig766 90263..90307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig766.27.1

>prot_P-littoralis_Contig766.27.1 ID=prot_P-littoralis_Contig766.27.1|Name=mRNA_P-littoralis_Contig766.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp
MAGSTPDEDLWVYHEKQVSSLCGQHCINNLVQAASYTAADLADIAHDLDA
QERQHMLAEGCDTPDALKFLAEDSGNVDAAGNFSIQVLSTALKRLYGVHL
VSAGSESVGQLKTTGYDGETAFVLNRHAHWVAIRSIGGAYWDLNSMLDNP
ARITTFALEAYVHQLQQDGYSVFVVRGNDLPAAASEPREGSRDSWYRVKD
LLQLSKGGKGSGGTLNTAATDVWLNSGPGQRLDGGTPSTGHEPTGGTGAQ
NGAGSGPSVISSEDMQIAMAISASMGGGEVSKEAGGVSGGGSDEEDQVAR
AIALSLSQGEPPSPPPSSSSSSSSTYTPRPVPDLQPNGPDVVRVQLRVGS
SGKVVHSFRRSDPLTALLDVAAQALAKSDGKALTAPFDVIAPGGRPLLKA
GVIVAAADGGAEAAAAEAGGEGEEKEISGPTIGSEQLSGASVIVRRA*
back to top

mRNA from alignment at P-littoralis_Contig766:81159..90472-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig766.27.1 ID=mRNA_P-littoralis_Contig766.27.1|Name=mRNA_P-littoralis_Contig766.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9314bp|location=Sequence derived from alignment at P-littoralis_Contig766:81159..90472- (Pylaiella littoralis U1_48)
GCTGTTTGTTCGGGTGTTCGGTCTGTGAAAAAGTGGTGAAGTGAATGGTC
GAGGGGGGTGCCCAGGTTATGTCACGGATCCCCCCGCTGAACGCTCTGCT
CGCGCAGTCCGACTCACAACCCAGACGGGGTGTGACTTACCCAGCTTCCG
TTGGCCATCTCCGACATGGCTGGATCAACCCCTGACGAAGACCTCTGGGT
GTACCATGAGGTAATACTACCATTGCACCTCGAGCTTTTTGCACCCCGTT
GCCGTTCAGGCCTACTCTTGTTTCGCCGTAGGCTACAGACTGCTGTGGTT
TTTCAGAGTCGTATTTATGATGCAGCATCAAGTGTCTTTCTGTTTTTGGT
TCCGCTGCAAGTCACACATGGAAAAAGAGGATAATATTGATGCTGCCGCA
TTTACACCGCAACGATGGGTTTAAATGTTTAAATAGGGGACCTCTTTGGT
TTGATCAAGCCTTTCACGTTGGAGTTGCCAATAAGCCGCGACTGCAGCAT
GGTTTCCCTTGCCACATGAGAATGATCCGTGTTTTCGTCTTTGGACGTCG
AGCTACTGCGGTCGTTGTGTAAATTTCATGTCGCAACTTTCCGGGCATTG
TCGACATTAGTGTCGTCGTCGTCGTCTGCGCCAGGTGGAACATTCCATGA
ATATTCCCCCGCCTTCTGCGGAGGACGCAACATGTGTTGACCACGCTCTG
TTCGTCTCTTTTCTGCCCCTTCCCCGGGCACAATCACCATGGGGCACAAG
CAACGCGCGCAAGACTGCTGCACGCCTCCTCCACCTATTGCGCGTCATTC
GAACCAACTTTCGTCCAACCACGCGCAGCAAGTGGCGGTTACAGCAGTCA
TCATGGTCACCATTTGCCAGTAAGGCCGCCACCGCTACCGCTGTGCTGCC
CTTCTCGCTCCCCTCGTGCTTCGTTTTTATTTCTGGGCACTTAACGGTAG
CTGCATGGAACCTGGTGTGACAGCAGTGGTACGACTACGAGAAAAGACGT
TGTGTTCGTGCCATCGACAGCAAGTATACCGGCTGGCTGCTGTGTTGCCG
TGTAGTGAAAGTCTACTGTAAGAAGGTACAGAGAGTCCGCTGTGAAAGTC
TACTGTAAGTAGGTACACGAGCATGAAGCAAATTTTTGTGGGGTGCTCCG
TGGTTGCAGGTAAGCAATGCACGCACCAACTAACCCTAACCCCAACCCTA
ACCCTGCTGGGCAAACAACGAACAATCCACGCTACGGACGTTACTCTCTA
CCCCGTGACCTCCATCGCATCGCCTCGATTGTGCTTCGCGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTACGCCGCTGCTGCTGCCTCTCCTGCTTT
CCCTATCATATCATACGACTACAGAAGCAAGTGTCCAGTCTCTGCGGGCA
GCACTGCATCAACAACCTGGTCCAGGCAGCGAGCTACACCGCGGCGGACC
TGGCCGACATCGCTCACGATCTAGACGCGCAGGAGCGGCAGCACATGCTG
GCAGAGGGGTGCGATACTCCAGATGCACTGAAGTGAGTCTGCCCTGTAGC
CCTCCCTATCCACATGATACAAACAAGCTGCAAGCCTCATATATATGTCT
GTACACAGTTAAGGTGGTATACAAGCTTTACACTTCGAGGTATAATACTT
CCCAACAGCTGTGTGTAGTCGGCCTGGATCAAGGGGCACAACCCTTCGCC
AAAGCTGAAGGTATCTTACGGCATGTGCCTTGAGTCGCGTAAAGTACCCA
CCACGGGACCCCCTGCACGATTTTCGATTTTCGAAGGTCGAAACGAGGGG
TTCCAAAATTATCAGATAGCGTTTTCCTCACATTTTCGAAAAGTTCCCGA
TGAGTTGAGAGGTTAGGTTAGATGAGATGGGATGTTAAAATCCCACTGGA
ATCCTTTTTGGCCCTTGATACTCCTTTTGTCGTGGAGCAAAGGATCTTTG
AAAATCGGTCAAGGGGGCCCCGTGTGGCTTATTTTACGACCTACGGTATG
TGTTGGCGGCGACGGCACGAGTAGGACGGATCTGCAGAGCCAGCCATCAA
CCCTCTGCACCGTTTTACGTGGACAGTGATACACAGCGTAAAGTAGGCGC
GGGCACCGAGGACATCATTGCTGCTTCAGAGTTGTAGCGGATGCGCTGTC
GGCTGATCTGGAGGTAGTTTCGGCCCTGGATGTAAGGTGGAAGAAGTTTC
CATGCGTGAAAACAACACCACCACCACCAGCAATAATAACAACAAACAAC
AACAACAGCGCACTGCTGTTGACTGGTGTACATTCCATACGATGCTTTAT
GTTTTCGTCCACATAGGTTTTTGGCGGAAGATTCCGGGAACGTGGATGCG
GCAGGAAATTTCTCCATACAGGTACAAGAAAGTTCCTTGAGAATTGTCGA
GGCGGGTCGTTTACAGGTAGCAAAAACTGACGTCCCCTTTGCGTGAGATT
GATATTTCCAACACAATCGCCCCATCCCCTCAAGCTTGCTTTAACCCTTT
TACCCCTCTGTGAAAAATCGTACAACTAGGTTCGTTTTTTAACAAATGAT
AAAAGCAAGTGAACGCGTCGCAAAATAAAATGGCGACGCGTTTCACTTGC
TTAAAGAATGCGTTTGAAGAATAAGCGGTTAGCGAGGTGAAAGTTCAGGA
ATTGGGAGTCACGTGATATTCCAAGTGACGAATAACAACATGGCGACGCA
GAATGGCGACATTTGGCTACCTAGGGGTAGGAGAGTTAAGCTAACCCGCC
GAATCCCGCCCGAAACCCTCCTTTTGTATCGGTGCACTGCAGGTCCTGAG
CACGGCCCTGAAACGGCTGTACGGAGTTCACCTAGTCTCCGCGGGGAGCG
AGAGCGTGGGACAGCTCAAAACCACGGGATATGATGGCGAGACCGCCTTC
GTGCTGAACAGGCACGCGCACTGGGTGGCGATCCGGTCCATCGGGGGGGC
ATACTGGGACCTGAACTCAATGCTCGACAATCCTGGTGAGAGAGAGTGAG
TGTTTGTGTGTGTGTTTGTGCGTGTATGTGCGTGTGTGTTGTTTGTTGTT
GTCGATTCTCATGTTGGCTCATTACCAAAGTCTAGCCCGTGGTCACAAAC
CAGGCACACTTCGTGCTATCATATTGTGATGGGGAGAAAAAATAAAAGTA
AGAATAAAGGAAATAAAAATAAAAATAAAGGAAAAAAAAATAATAAAATA
AATAAACAAGAAGCGGTGGCGACACTCAAACCAAAGCGTTTATTGCCGAC
GGGGTGCCTCCTGCAGTGACCAAAGCTAAAAATACAGATATACAGGCCTG
AAAAAGCAAAAATCGGAAACATACAAAAAATGTGTGTGTCACTATGCTTG
TGTCCTGATCCCACCTGTCCTCGGCGCCAGTCTACACCGTTACGTTCGGT
GTGTGTGTGGACGCATCAGCCGGGGTCGCATGCACAGGAATCTTATTTAT
TTTCTGTTGGACAGCGTGTCATCAGCAACCAATTTTTTTCCTCCTAGCAC
GATATGTGCCTGGTTTGTGACCACGGACTAGACTGCGGCGGTAGTGAGCT
AATGTGAGAATCAACATGTACTGTACTGTATTGCAAGGAGGACGGGGTAC
GTTGTCGCCTACCATAACGCCGCAAGTGGAGAAACCCGTCGTAGATGCTC
GGCCAGTTTTTCCGAAGAATCAAATCACAGCAGCGCGGTATCACCATCTA
GGCGCGTGCACCCCTCTGTACTCTCCAACGTCACTGGCGACGCCAACCGT
TCCACCCGGCTTGATCACGGATGCATGCGTCAACTTTCTACAACGCACGA
CAACAGGGAGTCTCTCGTCAGCAACGGGTTGGGGTGTCGCATGGTCTGTG
ACTGGATGTATGATGTGACCTTCGTCATGAAGACACCAATTTTGCTTTGC
GTTTCTACAAAGCCTCTCAGGAAAGAAACTTAAACTTTCAGCAGCGCCCA
ATCTCAACGTCCCTCACGAGGCTCGTCCGGCGGACCAAAGCAAGAAGGAT
TACCGTATGATAGGTCGCATAAAATATATCACACTCTCATACGTTAGATA
CCACACCCCCTCCAAAAAGTCACTCAATACCACACCTGTGTGCTAGTTCT
TTTTTTATCCTGAAAAAGGCTCCATCCAGTCTATCTCAGTCAGTAAAAAG
TGACAGAAGATACCACACCCACACCCAGTCAAAAATCACACAATGCCACA
CCCGGTGTGATTTTTTTTCACACCCAGAAATGTTTTCACACCGGTGTGAT
TTATTATGCAACCTGTGTACGGGTAGTATCCTTACCCCAAAAACGTTTTC
ACACCGGTGTGATTTCTTATGCAACATACATACGGGTAGTATCCTTCCTG
TCTCTGACGACGCCAACATGGCCTTCCCCTCCCTTGCGACGCTGCGCGGC
CTGGCAACCTGTCCGTTCTCAGCGCGAATCACGACCTTCGCTCTCGAGGC
GTACGTTCACCAGCTCCAGCAGGATGGCTACTCAGTCTTCGTCGTGAGGG
GCAACGACCTGCCGGCTGCGGCCAGCGAGCCGCGGGAAGGATCGAGAGAC
AGCTGGTACCGCGTGAAGGATCTGCTCCAATTGTCCAAGGGAGGTGGGTG
GGTGCGTGGGTGGGTGGTGGACCGCCCTGTTTTTTGTTTTACGTTTTCAT
ACCATTGTACGTGTTCATACTCAAAAGTGTGTATTTTTTCATGGTTGCTT
CTCATGTGACTTTCTTGTATAAAGCCCCCCCCTCCCCCGAGATACCATCC
CACGGAAGTCCCACATGATTTCCGTACCGCAGAGTCGGATCGCACGGCGT
TATCCGTCCCGACTACCCGATCATGACTGAAAGTTGAGCACACATGGCCT
GCCGTCAACGGAAAACGGTAATTAAATGAACAGTGCCACACGATAGTTAT
CACTATTCTAGCATAGGCACCGCCACGAAGGGCAGTATGGGGTTCCGTAG
GTCGCGCAAAAGTAACACACACACACACACACACACGTCCCTGGAGCAGT
TCTCAATAGTCTATCGATTCTTTGTCAGCAGAAAGAGTGCCGGTACCAAC
AGGGGTGAATGGCGTCGGAACCATCTCGAGGAAAGCTTTCAGAAAACACA
GACATGTTTGAAAACACAGACATGTTTGATGTCTGTATCCTAATTGAAGA
AACCGTAGAGCAATCTATCAACCTTTGAGAATCCGTCAAGGGGACCCGTA
TTTTTTTTTCACGACTCACGGTAGTGGGCACCGATCCTCGAACCCTTCCA
TTCTCTTTGAGAAATACAGTAGTATGCGTGGCTCGCGTCGGTCAGCGGAA
TGGACACGAAATTTTCGGACACATCTCTGGAAAGAGAAAGACATTTAGTG
CCCAGCGTTTCCGTATTGGTCGAAACCGATTTCATAGTGCTAAATTATGA
TTGGCCGAAAATGCCTGGCCGGCGGGTGCCTTCAGCCAGGGCCGTATCTT
GCAAATCATATTTTCCCGAGATCAGCCGTGTACGTTGTAACTTGGATCTC
AACTCTCTCAGAGGGTCCCTCTGTTTGCGTACAAGAAGACAGGATTACTA
CAAGCATCTTTAATGTTATCGTGTCGTGCATGTGCGATGTTTGAAGTTCG
CCGCCGGTGTATTTACTGTTGAAAATACACACACACAGGCAAAGGGTCCG
GCGGCACTTTGAACACAGCGGCGACGGACGTCTGGCTCAACTCTGGCCCC
GGACAGCGATTGGACGGCGGGACACCGTCAACAGGTCATGAGCCGACCGG
GGGAACCGGTGCGCAGAACGGTGCCGGCTCGGGGCCGAGCGTCATTTCGA
GCGAGGACATGCAGATTGCCATGGCTATCAGCGCTAGCATGGGAGGTGGC
GAGGTTTCCAAAGAAGCAGGTGGCGTTAGTGGCGGGGGGAGCGACGAGGA
AGACCAAGTTGCCCGTGCTATCGCGCTGTCACTGTCGCAAGGAGAGCCCC
CGTCGCCGCCACCGTCGTCGTCTTCTTCGTCGTCAAGCACCTACACGCCT
CGGCCCGTGCCAGACCTGCAGCCGAACGGGCCGGACGTCGTACGGGTACA
GGTGAGCCGCAAAACGCCGGCCGCCCCTTTCCAGCGAGGAAACAGAAGAT
CAACGTTCTGAAGGACTGTTCTTCCACTTGGAATATTCGTGGAATATTCT
TGGAAAGTTATTGGAATGTTTATTCACCGGTGTGAACCCGGTTCTACCCC
CCCCCCCGCGCCCCATGTGTCGGAGAGGCTGAACACGAAGAGCCAAGAGG
ATGTAGTCCGTGACCGGGCATGCCGGGTCCGGCCCGACGACCGAGTTTTC
TTGATACCGGCTTGCCTGCCATATGTGCGTCGGGGGTGTACATGAACGAC
GAGGACGAAGTGCAAAATATTAACATTTCGTTGCAAGATCTTTTGTTGGA
TGGTGTTGACCGATACTGCTGTATAATGTGTTTCATCGTTTTTTTTTTTG
CCTCAGCAGGCATGAAACAACGCACATATTTATACCTTGCATGAACGGAG
GCGTATGTTAATGGTTGTTTTTTCTTTTCTTTTGCCTCAACCAACGCAAA
ATCTATAAATGGCGCCACCTTTGATCGGGCGGTTTCGTTTCGAAAAACAC
GGCAAATGGCGTGAGGCGCAGACGGCCAGATCTTCTCTCTTTCGGTCGGT
TTCCGTTTTCGAGCATTTTCATGTTTGTTGCCGCAAGAGACTTGCTTCCC
TTTGCCAGGAAAGCTGTTTTTCGAGTCAACATCGGACAACAACTTGTAAA
AAAAAGGAAGGCGTGTCGATGCGAAGCTCAAAGTCAATTCACGCATGGGA
TAAACTGGTTACACTAGCTTGTGCTCTCACGCGGGGCACGCACGCAGGCG
TTCCCAGCCCCGTGAATCGCTGATCTAGCAGCACGCAACTCGAGGTTAAA
TTAGCACATGGCCGGTTCACACTTGTAACCCACGTGAATGATATGCCCAA
TCTCGCCGCTTGCAACACGCAACTCGAAGCTAATCCACCACTTTGGGGCC
TTACAAAAGGGGGGTCTCCCTTGCACTCCGCGCTTGTCCACGGACGCCAA
CAATTCAGACAAAATCATTTGACGGTTGACCTCGAGAGAAGCATGAACTT
GGAAACACGTTGACTTGCACGCGCACACGAACAAGAACCGACACGTCATT
TTGTTTTGGGAAAAATTGTTGTGTCCCCCCCCCCCCACAAAAAACGCAGC
TCCGAGTTGGAAGCAGCGGAAAGGTGGTGCACAGCTTCAGGCGATCCGAC
CCCCTCACTGCACTGCTGGACGTGGCGGCTCAAGCCCTGGCCAAGTCTGA
CGGGAAGGCGCTGACGGCTCCCTTTGATGTCATCGCACCGGGAGGCCGCC
CGCTGCTCAAGGCCGGGGTAATTGTGGCGGCGGCTGATGGCGGCGCAGAA
GCAGCAGCAGCAGAGGCAGGCGGGGAGGGAGAGGAGAAGGAGATAAGTGG
CCCTACGATAGGGTCGGAACAGCTGAGCGGCGCGAGCGTGATCGTGCGCA
GGGCTTGAGTTTTTTTGCATGGGCTTTTGCCATGCACGAGGGTTCGACGT
CCCGTTTCATGGATATGTAGCAGGAGACTCCACTCCCCCGCCCAGGACCG
GATTGAGATGTTGGAACGCCGGTTACGCGATGCACTGAACAGCAACGAAG
AGGATGCCGACACCGAGAATAATGCTTGTAAGTATTCGGAAGACTTTCCA
TCGACGAGGTTGATGGTTCCAACGTCGGGCCGATCACCCTTTTTTTCGGC
CTCGGCACTCTTTTGCTCATTGGTGCTTGTGCAGAACTCCGTCATATCAT
ACCTGGTAGCTTTCAACGTCGGCCAGAGGGGTTGTGATACGTCGTGCTTT
ATACTTCCGGTATTTCATTGGCTTCGGCGAAGACCGGGCTGGCGCGCTTC
TGTCTGTATTTATTGACCAATCAGAAAACTGCGGACACCTTTTCTCTCTC
TCTCTACCTGTCGTAGGTGGGTGACGCAGCACGCCCCCCCCCCCCTCCCA
TCCTCTGAGGACCCCCCCCGCGGACCAAACATCGATCATCGGATTTTTCC
GCAACAAAAAACAGCAAGGCCCTCCCGGTTGTGCTGTTGAGCTGTTGTTG
CCGCGGGTAGACAAATATACCATACTAGCTAGCTTTCGGACTTTGCCACA
GGGGTGTGATAGTTGTGCTTACGGTAGTAGTGGCTGGCGAAGGCCGAAGG
CCGACCGGCATCAGCATCACACTGGCGAGGTCAGGGGAAGAAATAATATG
TAAGGTACCGTACTCGTCCTCGCTGCCACGGTCGGGTCGTCAGAACAGCT
GGGCGAGCGGCGCGGGCGTGACTTGGTCGAAACGGGTCATGCTTGTTGCT
TTCAGTTTTTTGTTGTGGTAATTGTCCTTGGAGTCGGCTCGGGGACCTCG
CCGGCCCGGCTGTTGTTGATAGTTTATCGGAGGAAAGGGCTCTATACGAT
AGGTATGATAGGGCGTCTTGGATTTCTATTTTATTTTTTACACCAGCGTG
ATATGAGTCCGGTTCCATCTTTTGTTTCATGGTACTGCTTGCTGTCCGTG
AGTGATGTAGCTCGCGGAGGAAATGCGGCTTCCTCGAAAAAAAGGGGATG
TGTTGTTTGTGGCAGGAACTGGTCTGATCTGATCTGATCACACACTCACA
CACATATCGGTCTGGTCTGCTAGGGACGCGGTCGCGTTGGGTGGTGCCTA
CGCTCACCTTCCCTACAGTAGTGCTCCGCGCCGACCGTCGGTTACAGCTT
TTACGTGAGGCAGAAGAGAAAAGCTGCTCGCATGCAAACGAACAAACGCG
TGCACCACTGATGTTCTTCAAATGTCGATTTCATACAGTACGCCAGTATA
GAGTGTCCGCAGTGCCCTCCGGCACATAAATACCCTGCAAGCCTGCAATA
TTTACGTACTTCGAAGTAGCTTTTACTGTTGTCTACGCGCGCGGTTGTCC
GTACCATCCCTTTGAGCATGTTCGTCTAAATAATACGAAGGCGTTTTTTT
CATGAATGCCATTTCGTCGGCGGTTTTCGTCGGCTTTATTTACTACGTCA
TCAAGCGTGGTTCTCTTTTTCGAAGTGTTTTTGGTTCGTTCTGGACTGGG
GCATCTTTTGGCTGGGTTTACCGTAGTAACCGCGTTGTTGTTTTCTATTG
CCTGATTCTACCCACGGTATTCGTCTAAGCGTCAAAACGGAAGCACCAAA
AATTGTCCTATTCTCGCAGCGGTGCCTTCGCACATACTCCGTATGTAAGA
CCAGGAATGGCGGGACACCCTACGGTTTGACCGGTGGCCGTCAGGGCGAG
CGATAGAATGAAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig766:81159..90472-

>mRNA_P-littoralis_Contig766.27.1 ID=mRNA_P-littoralis_Contig766.27.1|Name=mRNA_P-littoralis_Contig766.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1344bp|location=Sequence derived from alignment at P-littoralis_Contig766:81159..90472- (Pylaiella littoralis U1_48)
ATGGCTGGATCAACCCCTGACGAAGACCTCTGGGTGTACCATGAGAAGCA
AGTGTCCAGTCTCTGCGGGCAGCACTGCATCAACAACCTGGTCCAGGCAG
CGAGCTACACCGCGGCGGACCTGGCCGACATCGCTCACGATCTAGACGCG
CAGGAGCGGCAGCACATGCTGGCAGAGGGGTGCGATACTCCAGATGCACT
GAAGTTTTTGGCGGAAGATTCCGGGAACGTGGATGCGGCAGGAAATTTCT
CCATACAGGTCCTGAGCACGGCCCTGAAACGGCTGTACGGAGTTCACCTA
GTCTCCGCGGGGAGCGAGAGCGTGGGACAGCTCAAAACCACGGGATATGA
TGGCGAGACCGCCTTCGTGCTGAACAGGCACGCGCACTGGGTGGCGATCC
GGTCCATCGGGGGGGCATACTGGGACCTGAACTCAATGCTCGACAATCCT
GCGCGAATCACGACCTTCGCTCTCGAGGCGTACGTTCACCAGCTCCAGCA
GGATGGCTACTCAGTCTTCGTCGTGAGGGGCAACGACCTGCCGGCTGCGG
CCAGCGAGCCGCGGGAAGGATCGAGAGACAGCTGGTACCGCGTGAAGGAT
CTGCTCCAATTGTCCAAGGGAGGCAAAGGGTCCGGCGGCACTTTGAACAC
AGCGGCGACGGACGTCTGGCTCAACTCTGGCCCCGGACAGCGATTGGACG
GCGGGACACCGTCAACAGGTCATGAGCCGACCGGGGGAACCGGTGCGCAG
AACGGTGCCGGCTCGGGGCCGAGCGTCATTTCGAGCGAGGACATGCAGAT
TGCCATGGCTATCAGCGCTAGCATGGGAGGTGGCGAGGTTTCCAAAGAAG
CAGGTGGCGTTAGTGGCGGGGGGAGCGACGAGGAAGACCAAGTTGCCCGT
GCTATCGCGCTGTCACTGTCGCAAGGAGAGCCCCCGTCGCCGCCACCGTC
GTCGTCTTCTTCGTCGTCAAGCACCTACACGCCTCGGCCCGTGCCAGACC
TGCAGCCGAACGGGCCGGACGTCGTACGGGTACAGCTCCGAGTTGGAAGC
AGCGGAAAGGTGGTGCACAGCTTCAGGCGATCCGACCCCCTCACTGCACT
GCTGGACGTGGCGGCTCAAGCCCTGGCCAAGTCTGACGGGAAGGCGCTGA
CGGCTCCCTTTGATGTCATCGCACCGGGAGGCCGCCCGCTGCTCAAGGCC
GGGGTAATTGTGGCGGCGGCTGATGGCGGCGCAGAAGCAGCAGCAGCAGA
GGCAGGCGGGGAGGGAGAGGAGAAGGAGATAAGTGGCCCTACGATAGGGT
CGGAACAGCTGAGCGGCGCGAGCGTGATCGTGCGCAGGGCTTGA
back to top