prot_P-littoralis_Contig765.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig765.18.1
Unique Nameprot_P-littoralis_Contig765.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length550
Homology
BLAST of mRNA_P-littoralis_Contig765.18.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 548 bits (1411), Expect = 2.880e-188
Identity = 317/557 (56.91%), Postives = 390/557 (70.02%), Query Frame = 0
Query:    1 MKVSRDMRLSWLQRWQSMDKDGSKLLDYTEFVQTCGLQENLWSRRMFDLLDKNFTVEVTFRMCSRRGATWNPDQSVLDERDIRGFVEERRLSYCVLQTSLDDDPTSTTVRWVYDFLSGLSLAEFSTSVHNAGKQETERLAHSARDLFHNEGVVRQMSSRKMEEARHILKNEARRLVGTAKGAAGGIEKAGRLKTIAAVFVVVHRMRTLAEAAKQLPNAET----GKRLGKAARVGGDRALAAIKRSVRVIAAARYFSQAGITARKAEGDERGEGRPDPVDGRDVEPLLDKDGSN-----SEGSELSESRREEGEAKVVA---KKPWAALTGARVKAELKIYQERQWAATEKFYARLATATERLEAKRTDEKGYDFSADFPKLWCESHMYDSKGEREIKHRRRRRTSASKRVTNAYLRFIGLWQAAGGDSGRSKVGAAFNRWRLNTCDAAVDELS--LSTLSRGGTATAARDFGFTIVDVTHAQRHTQSLQEMWENGGDGGXXXXXGNGVDEDRLYSIIMNKERADRLLPRELCEVYEREMIERIDRRQAENNIPVVP 543
            M VS DMRLSWLQRWQSMD+DGS LLDY EF+Q C L++N+WS RMF+LLDKNF VEV FRMCSRRG+TW+PD+SVLDE+DIR FVEER L + +    L D PTS   RW       +S AE S+ V  A K+ET+ LA SARD+  + G +R++S+RKM + R  LK E+  L   AKGAA  +EK GRLK    V V V+RMR LAEAA+Q P+ ET    GKR+G+AA+VGG++AL+A++RS   I AARYFS+AG    + E     + RP   +    +P +   G        E SE S+  RE+ E++V A   +KPW  LT A+ KAE+K++QER WA TEKFYA L TA+ERLE KRT EKGYDFSADFPKLWC ++M  S+GEREI++RR+RR+SASK+  N YLRFI LWQ AG DSGRSK+  AFNRWRLNTCDAAVD+LS  LSTLSRGGTA +           T+A RH  SL+EMWE+    G     G G     +++IIM K +ADR LPRELCE YEREM+ERIDRRQAENN+P+VP
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNF-VEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHH-LYNEGLKDGPTSARARWARS----MSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADSGDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDILTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYRRKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAASEES-------STYAPRHIPSLKEMWESAAAAGE----GEGT---HVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPIVP 537          
BLAST of mRNA_P-littoralis_Contig765.18.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 7.820e-123
Identity = 292/701 (41.65%), Postives = 365/701 (52.07%), Query Frame = 0
Query:    1 MKVSRDMRLSWLQRWQSMDKDGSKLLDYTEFVQTCGLQENLWSRRMFDLLDKNFT---------------------------------------VEVTFRMCSRRGATWNPDQSVLDERDIR----------------GFVEERRLSYCVLQTSLDDD--PTSTTVRWVY-------------------------DFLSG--------LSLAEFSTSVHNAGKQETERLAHSARDLFHNEGVVRQMSSRKMEEARHILKNEARRLVGTAKGAAGGIEKAGRLKTIAAVFVVVHRMRTLAEAAKQLPNAETGKRLGKAARVGGDRALAAIKRSVRVIAAARYFSQAGITARKAEGDERGEGRPDPVD-GRDVEPLLDKDG---SNSEGSELSESRREEGEAKVVA---KKPWAALTGARVKAELKIYQERQWAATEKFYARLATATERLEAKRTDEKG------------------------------YDFSADFPKLWCESHMYDSKGEREIKHRRRRRTSASKRVTNAYLRFIGL-------------WQA----------------AGGDSGRSKVGAAFNRWRLNTCDAAVDELS--LSTLSRGGTATAARDFGFTIVDVTHAQRHTQSLQEMWENGGDGGXXXXXGNGVDEDRLYSIIMNKERADRLLPRELCEVYEREMIERIDRRQAENNIPVVP 543
            MKVS DMRLSWLQRWQSMD+DGS LLDYTEF+Q CGL++N+WS RMF+LLDKNF                                        ++V   M S    T    + V  E  I                 G V  +RL      TS  D   P +T V  V                          + L+G        +S AE S+SV  A K+ T+ LA SARD+  + G +RQ+S+RKM + R  LK E+  L   AKGAA  +EK GRLK IA V V     R   E A++     TGKR+G+AA+VGG++ALAA++RS   I A RYFS+A   A +     + + RP   + G D +      G      E SE S+  RE+ E++V A   +K W  LT A+ KAE+K++QER WAATEKFY  L TATERLE K+T EKG                              YDFSADFPKLWC + M DS+GER+I++RR+RR+SASK+  N ++  +GL             WQ                 AG DSGRSK+  AFNRWRLNTCDAAVD+LS  LSTLS+GG A +           T+A RH  SL EMWE+    G     G G     L++IIM K +ADR LPRELCE YEREM+ERIDRRQAENN+P+VP
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAYLGARGFVTAVNRRVAAAAQRQFQTMALAAASKKMQVLNGMSSIGNTTAKKIRRVASESSIGRHLNSGGNERPTVAKPGDVVMKRLKLWTTATSAVDSERPLTTRVERVRATLRRVVSDSDLGNIGKSERSAKFGESLTGARARWARSMSPAELSSSVKTASKRATKHLAESARDISQSGGAIRQLSARKMADTRGWLKVESEMLTEAAKGAARDLEKFGRLKAIATVAVA----RPDDETARK-----TGKRVGEAAKVGGEKALAALRRSFVAITAVRYFSEAVKDAARGGLRRQDQQRPTSANLGGDPDVADSGYGMLLGGDEDSEDSQRAREDDESEVPATAEEKLWDILTDAKAKAEVKVFQERHWAATEKFYENLVTATERLEEKKTKEKGKYSILNGIVGKKQFLNVTPCLPLRSGYEKRYDFSADFPKLWCVATMRDSQGERKIQYRRKRRSSASKKAANVFM-CLGLDVNRQRKREQSTVWQVLASIQNNKLVLQQHQEAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSKGGRAASEES-------STNAPRHIPSLMEMWESAAAAGE----GEGT---HLHAIIMKKVQADRPLPRELCEAYEREMVERIDRRQAENNVPIVP 677          
BLAST of mRNA_P-littoralis_Contig765.18.1 vs. uniprot
Match: A0A836CA45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA45_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.930e-5
Identity = 45/148 (30.41%), Postives = 65/148 (43.92%), Query Frame = 0
Query:   11 WLQRWQSMDKDGSKLLDYTEFVQTCGLQENLWSRRMFDLLDKNFT-----------------------VEVTFRMCSRRGAT-WNPDQSVLDERDIRGFVEER--RLSYCV-------LQTSLDDDPTSTTVRWVYDFLSGLSLAEFS 125
            WL RW  +D   +  +   +F+    L + LWSRR+FDL+D NFT                       ++  FR+ SRRGA  +N   +VLD +D R F   R  RLS          +  +LD+D +            G+S AEF+
Sbjct:   18 WLDRWPQLD---ASYITVRDFLSMLALPDTLWSRRLFDLVDVNFTGCVAFNDFVTGTYRLLLLDRHNLLQTAFRVLSRRGAAGFNAAVTVLDHKDARTFAALRYPRLSAAAAARRGAAILAALDEDGSG-----------GVSFAEFA 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig765.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLD7_ECTSI2.880e-18856.91EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JXQ3_9PHAE7.820e-12341.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CA45_9STRA2.930e-530.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..304
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig765contigP-littoralis_Contig765:112740..120806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig765.18.1mRNA_P-littoralis_Contig765.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig765 112740..120806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig765.18.1 ID=prot_P-littoralis_Contig765.18.1|Name=mRNA_P-littoralis_Contig765.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp
MKVSRDMRLSWLQRWQSMDKDGSKLLDYTEFVQTCGLQENLWSRRMFDLL
DKNFTVEVTFRMCSRRGATWNPDQSVLDERDIRGFVEERRLSYCVLQTSL
DDDPTSTTVRWVYDFLSGLSLAEFSTSVHNAGKQETERLAHSARDLFHNE
GVVRQMSSRKMEEARHILKNEARRLVGTAKGAAGGIEKAGRLKTIAAVFV
VVHRMRTLAEAAKQLPNAETGKRLGKAARVGGDRALAAIKRSVRVIAAAR
YFSQAGITARKAEGDERGEGRPDPVDGRDVEPLLDKDGSNSEGSELSESR
REEGEAKVVAKKPWAALTGARVKAELKIYQERQWAATEKFYARLATATER
LEAKRTDEKGYDFSADFPKLWCESHMYDSKGEREIKHRRRRRTSASKRVT
NAYLRFIGLWQAAGGDSGRSKVGAAFNRWRLNTCDAAVDELSLSTLSRGG
TATAARDFGFTIVDVTHAQRHTQSLQEMWENGGDGGGGSGEGNGVDEDRL
YSIIMNKERADRLLPRELCEVYEREMIERIDRRQAENNIPVVPQLVRLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair