mRNA_P-littoralis_Contig1193.6.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI) HSP 1 Score: 1183 bits (3060), Expect = 0.000e+0 Identity = 606/1046 (57.93%), Postives = 737/1046 (70.46%), Query Frame = 1
Query: 1 TAIVEELVDDGNKKTKKTEDQIRHNFRALWKKLSESSVVATNEGRQMRRALLSAVCGPTTSYMEVQEFVGGTLSRKCFKDAMDKRETAFGNGFGNGSLNDLISPRRQRADRYEVIYPNALRFIQERIDFHTQPSPCQTKWDHDYAPGNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVLWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHKSACVSGHCLHCQRKQDRFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXYNPNGGGNQ-TRSRNVRKTRKIYDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKASYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSCFCGECLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPDYSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQFRAVPLTCIAGLGQGISGYMERSPYPLVCEDSTHFVMRDGVLENARSSVVLMSTSPSSAFKGFSPVGLTEEELTRATVASPRFSLGTEVERAFKGPVRENRSRVWRTAKRLTARVVDMMTDDKSRRHRYKLRWDADRTTKLLAGVQNIVDEGFVEKY 3135
TA +E+L K ++ + IR N RALWK+LS S VA++EG Q RR LL A+CGP T+Y EV EFVGG+LS + F +A +R+ L+DLIS R+ R+DR EV P AL +I ERI FHTQPSPC K +HDY GNH RS DNS+VCV P CK + VRYLMGT+ QLY TVM+DL QA A +VEV I F + +IPFYV+EQSLRSCICVHCYKAKL+TK LC LWPTLH+G TP S C C C+LCKDG C++YLPY SS +VHSMA+FSDM +C KE+LY S+DGT +AHK+ CVSGHCL C++KQ+RFF+CP+NKG RQ+ PA PA PPPGE+RWK FT VD G AT+A ++P GG + TR KT + +FM EL+ F KHRR YKTQR AF E KLTI++GEVLC+VDFQERLQ+ +QDEVQSQHW + ATTIFPC IFF+ DGRVW YSFQILSDDM QDNAWVQ+VM+KLL++DIPALLR++GA+PM R TI+TDNCAKQFKCRFHFGWVADA I LDK G+ TG RVH+EHHYFGACHGKNVSD+EG +TKEY R+M+ N W VASS DLC+KL KALNF LR A EE +AF +R GR GGTEQLL+TK Q TFLLTK N+++GR Y F+ A VS R +ARSSAK IEV+GCQT S AT+TPGV+ T +FSC+C C + + ENCPL+RKGIM GP+EF+RR N D++SAKE DL E+ M LPFGS ALLRVD+S+H G+DIVPV++ARKA W+P + DGMF HGD +VWVVDL Q R + VEY+VP IS + FRAVPL CIAGLGQG+ GYME S FV+R+GV+ENARS+VVL+S +P +AF+ F PV L+ E+ TRA V F GT +E+ FKGP N +W+ K+L A V+ TD KSRRH+YKL+W + +LA V+ VDEG VE+Y
Sbjct: 121 TAFMEDLASSSRKHKERGNEAIRDNIRALWKRLSSSETVASSEGWQFRRVLLGALCGPNTTYKEVHEFVGGSLSHRAFNEAQIRRDATDTTSI----LHDLISDRKLRSDRLEVSCPKALAWIVERIIFHTQPSPCLVKTEHDYDTGNHRRSEADNSLVCVYPARCKTESVRYLMGTKLQLYQTVMKDLDQAFAAEKVEVPSISRPSF-DKIIPFYVVEQSLRSCICVHCYKAKLVTKGLCDLWPTLHQGSTPGSKCDCECELCKDGGCAEYLPYGSSKAVHSMADFSDMLMCPKEQLYCSEDGTLEDAHKAVCVSGHCLLCKQKQERFFDCPKNKGNADRQLNPAAG--PAQ--VGAPPPGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDPLGGSKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDRNGREGGTEQLLVTKTWIGEDSDQTQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLLTNQFSCYCAVCRDSKPENCPLIRKGIMSGPQEFSRRANR-NTDIVSAKEDDLEELSGWMPSQLPFGSIALLRVDTSEHDGQDIVPVVVARKAACPWTPRVAVDGMFDHGDTIVWVVDLPQAIVRGKEVEYLVPRSISGVK-FRAVPLACIAGLGQGVLGYMEHPQCSQSSLSSETFVLREGVVENARSTVVLLSRNPLAAFESFQPVPLSVEDETRAPVEPRMFVNGTVIEQLFKGPRNSNGRPIWKHGKKLRAIVIACQTDIKSRRHQYKLQWSGELMILVLAEVEEFVDEGHVEQY 1155
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI) HSP 1 Score: 658 bits (1698), Expect = 3.200e-221 Identity = 340/733 (46.38%), Postives = 451/733 (61.53%), Query Frame = 1
Query: 70 HNFRALWKKLSESSVVATNEGRQMRRALLSAVCGPTTSYMEVQEFVGGTLSRKCFKDAMDKRETAFGNGFGNGSLNDLISPRRQRADRYEVIYPNALRFIQERIDFHTQPSPCQTKWDHDYAP-GNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVLWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHKSACVSGHCLHCQRKQDRFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXYNPNGGGNQTRSRNV--RKTRKIYDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKASYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSC 2259
H R W K+++ VVA G RR +L A+ G Y EF+GGTLSRK F +A ++R TA +G ++ L R+ R+D + YP A +++ I TQPSP TK +HDY G+H RS DNS+VCV+P C+ V Y+ GT+ LY M+DL+ A AG E+ I + F + ++PFYV+EQS+RSC+CVHCYKAKLIT AL LWPTLH GD S CTC C C DGAC +LP+ + SVH M + SD+ LC K +Y ++G ++AH+S CVSGHC CQRKQ FF CPR++G R+ + +T A + E PG ++W +FT+VD+ G AT A + P + +R + KT + DF E + IF R+ HRRQY QR AF+E T+++G V+ V DFQE+LQL +QDEVQ+QHW + TIFPC I+F+ GRVW YSFQ+LSDD TQD+AWVQ+VM K+L++ +PAL+R++GA M A FTDNCAKQFKCRFHFGW+A + D G++T VH+EHHYFG+CHGK+ SDSEGA TK R + N W V S LC L ++++F+L T +E F R GG +QLLMTK + G T L+TK N++LGR Y F A +S + R++ RS AKAI+V GCQ SK +AT TPGV+ATY SC
Sbjct: 2 HAIRETWAKINQPHVVAAEAGYNARRTILGAIAGEKVKYKHANEFLGGTLSRKSFNEAKERRLTAL----EDGDVSALAGKRKMRSDNLQEKYPMACCRVEQSILERTQPSPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHRVHYMTGTQQHLYHQCMDDLQVAFSAGRAEIASISRSSF-DKMVPFYVVEQSIRSCLCVHCYKAKLITVALYQLWPTLHHGDNSGSGCTCNCGFCSDGACRTFLPFATEKSVHGMGDLSDLLLCEKVFIYRGQNGKDVKAHRSVCVSGHCPTCQRKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGD----WEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLCTLLGESMDFMLLEPTEDEAMTFETARTSSRGG-DQLLMTKV-WGGESRSDERKTLLITKKPNTLLGRKYIFQAAGAISGAVRSACRSEAKAIKVQGCQAISKTVATETPGVLATYTLSC 723
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI) HSP 1 Score: 597 bits (1539), Expect = 2.040e-196 Identity = 326/678 (48.08%), Postives = 425/678 (62.68%), Query Frame = 1
Query: 7 IVEELVDDGNKKTKKTEDQIRHNFRALWKKLSESSVVATNEGRQMRRALLSAVCGPTTSYMEVQEFVGGTLSRKCFKDAMDKRETAFGNGFGNGSLNDLISPRRQRADRYEVIYPNALRFIQERIDFHTQPSPCQTKWDHDYAPGNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVLWPTLHRGDTPSSPCTCGCDLCKD-GACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSK-DGTSIEAHKSACVSGHCLHCQRKQDRFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTAT----SXXXXXXXXXXXXXXXXXYNPNGGGNQTRSRNVRKTRKIYDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTK 2022
I ++V D K K + R +W +S SSVVA+ G +RR ++ + P S+ + F+GGTL K +K A ++RE A N + R+QR+D E +YP A+ ++E I+ TQPSPC+TK HD A GNH RS DNS+VCV P LC+ + Y+MGT+ QLY++ MEDL+ A E G VEV I F + +IPFYV+EQS RSC+CVHCYKAKL T +L +WPTLH G+T + C+C CDLC G C ++LPY S V SM SD +C K LY + +G +I AH S CVSG+C C+ +QDRFF CPRN+GG+ R + PA +++ G + W +F VD G A + + XXXXXXXXXXXX P G V K + +F E+R I + KHRRQ+ QR FNE T+++G+V+ VVDFQE+LQL +QDEVQSQHW + TIFP I+F+ GRVW YSFQ+L+DD TQDN WVQYVM +LLS +P LLR+VGA PM +A IFTDNCAKQFKCRFHFGWVA + + D G+AT R+ +EHHYFG+CHGK+ SDSEGAITK R V N W V + E LC+ LAK +FLL+ A+ +E D F ++ GG +QLL+TK
Sbjct: 111 ICRQVVHDECKAKKNEHHAVVQAVRDVWSIVSGSSVVASAGGYSLRRTMVGIIGSPRVSFEAAKSFLGGTLKEKTYKKARERREEAL----KNNDFGKMAGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGISYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFED-IIPFYVVEQSPRSCLCVHCYKAKLATVSLVKMWPTLHHGETTGAACSCTCDLCSSAGGCKEFLPYSSPKEVSSMGKLSDKLMCDKIFLYTATGNGKAISAHSSVCVSGNCPRCKERQDRFFGCPRNRGGIDRDLGPASTSSSTIHPAGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGV-------VVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCELLAKEFSFLLQEASPDEADRFYEDKSHSRGG-QQLLVTK 775
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 555 bits (1431), Expect = 4.420e-172 Identity = 348/892 (39.01%), Postives = 461/892 (51.68%), Query Frame = 1
Query: 76 FRALWKKLSESSVVATNEGRQMRRALLSAVCGPTTSYMEVQEFVGGTLSRKCFKDAMDKRETAFGNGFGNGSLNDLISPRRQRADRYEVIYPNALRFIQERIDFHTQPSPCQTKWDHDYAP-GNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVLWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHKSACVSGHCLHCQRKQDRFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXYNPNGGGNQTRSRNVRKTRKIYDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKA-------SYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSCFCGECLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPDYSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQFRAVPLTCIAGLGQGISGYME 2727
R +W +++ VVAT G RR +L A+ Y EFVGG+LSR F +A +RETA G ++ L R++R+D + YP A +++ I TQPSP TK +HDY G+H RS DNS+VCV+ +E+ VR G EAG EV I F + ++PFYV+EQSLRSC+CVH Y+AKLIT ALC LW TLH GDT S CTC C C DGAC +LP+ ++ SVH M + SD+ LC K +++ ++ + H S + + DR F P + L A+++T A + W DS S PNG +F V DFQE+L+L +QDEVQSQHW TIFPC I + GR DNAWVQ+VM K++++ +PAL+R++GA M RA FTDNCAKQFKCRFHFGW+A ++ D G +T VH+EHHYFG+CHG + SDSEGA TK RQ + N W V L L ++++F+L T EE F R GG +QLL+TK GR F + N++LGR Y F A + + R+++RS +KAI+V GCQ SKI+AT TPGV+ATY SC GE TE C L R+GIME P E++RR NDD + KE+++ MF RM+ LP+GS AL+RV ++ G DIVP+ + RKAPS ++ ++ DGMF+ GD MVW+ D V VEY VPN + E RAVPL +AGLGQG+ GYME
Sbjct: 108 IREIWSNINQPHVVATLPGYNARRTILGAIASIDVKYSTACEFVGGSLSRATFNEAKARRETAL----AAGDMSKLSGKRKERSDNLQEKYPMACSRVEQSIAERTQPSPNLTKTNHDYRRRGDHIRSDADNSLVCVH----REKEVRNSPG----------------FEAGAAEVGSISRRSF-DKMVPFYVVEQSLRSCLCVHYYRAKLITVALCQLWSTLHHGDTSDSGCTCTCGFCSDGACRTFLPFATAKSVHGMGDLSDLLLCEKG---IARHASAGKRHSSVVLVITAV----SSDRRF--PASSAALG-----AIASTSEGQAGKPTDDDDGDWAPRVASDSSRPKKLTISPKNSEKYSGDTLLTGGSTTPNGA----------------------HSVF-------------------------------VFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGG-DQLLVTKTCIIGTEEGVGGRKQMQGEEDFSGHEEPNTLLGRKYIFQAAGDIPPAVRSASRSESKAIKVEGCQVISKIVATETPGVVATYTLSCLKGE-----TEKCNLFREGIMEAPAEWSRR--RSNDDEETTKEREMELMFTRMRNPLPYGSVALMRVRPEEYRGLDIVPIFIGRKAPSDYNSSFAKDGMFSEGDVMVWIHD---VFSHVRGVEYDVPNVLPVDEN-RAVPLASLAGLGQGLEGYME 880
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE) HSP 1 Score: 381 bits (978), Expect = 3.600e-116 Identity = 222/523 (42.45%), Postives = 302/523 (57.74%), Query Frame = 1
Query: 1486 IFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKASYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEF---------SCFCGE-CLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPDYSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQFRAVPLTCIAGLGQGISGYMERSPYPLVCEDSTHFVMRDGVLENARSSVVLMSTSPSSAFKGFSPVGLTEEELTRATVASPRFSLGTEVERAFKGPVRENRSRVWRTAKRLTARVVDMMT 3024
I+F+ GRVW SFQ+LSDD TQDNAW Q VM KL+++ +P L+R++GA M RA FTDNCAK+FKCR HFGW+A ++ D G++T VH EHHYFG+CHGK+V S LC L ++++F+L T EE F R +GG + L+ T R + T FL+TK N++LGR + F A + + R+++RS KAI+V GCQ SKI+AT TPGV+ATY SCFC E C + TE C L R+GIME P E++RR NDD + K++++ MF RM+ LP+GS AL+RV + G+DIVP+ + RKAPS ++ ++ DGMF+ GD MVW+ D V VEY VPN + E RA+PLT +AGLGQGI GYME +T + MR V+E A S +V+MS P AF P + + + RA V G VE+ FK P + R WR + + A+VVD+++
Sbjct: 120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKSVQ-----------------------SPRHLCTLLGESVDFILEEPTKEEM-TFEASRTSSSGGDQLLVTTVWGSESRCKEGKT--FLVTKKPNTLLGRKHIFQAAGDILHAVRSASRSELKAIKVEGCQANSKIVATETPGVVATYTLEVSRRTVGSSCFCCELCRKGETEKCNLFREGIMEAPAEWSRR--RSNDDEETTKKREIELMFTRMRNPLPYGSVALMRVRPEQYRGQDIVPIFIGRKAPSDYTSSFAKDGMFSEGDVMVWIHD---VFSHVRSVEYDVPNVLPVDEN-RAIPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVEGALSKLVVMSKRPQDAFVDCRPAKMRKIDRRRAHVQPSLVEAGAIVEKGFKAPP-QGRDTAWRGLRVIQAKVVDVIS 609
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE) HSP 1 Score: 284 bits (727), Expect = 4.450e-81 Identity = 178/481 (37.01%), Postives = 242/481 (50.31%), Query Frame = 1
Query: 1324 YKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKASYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSCF---------------------------------CGECLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPD-YSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQ 2664
+ T+RI LT+++G V+ V DFQE+ QL +QDEVQSQHW + TIF C I+ + R+W YS+Q+LSDD TQDNAW A P FTDNCAKQFKCRFHFGW+A ++ D G++T VH+EHHYFG+CHGK+V LC L ++++F+L T EE F R G +QLLMTK + R + A + + R+++RS +KAI V GCQ KI+AT TPGV+ATY SC C C + TE C L+R+GIMEGP E++RR NDD + KE+++ + RM+ LP+GS AL+ V ++ G+DIVP+ + RKAPS ++ + DGMF+ GD MVW+ D V +EY VPN + E+
Sbjct: 6 HPTERIQ--RTSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAW---------------------ALPPWCELFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKSVQ-----------------------GPRHLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRG-DQLLMTK------------------------IIRKFILQAAGDILPAVRSASRSESKAIRVEGCQPICKIVATETPGVVATYTLSCLNFHDGPWSVAPIGVFYLLDLVSMSHFPALLSASCELCRKGETEECNLLREGIMEGPAEWSRR--RSNDDEEATKEREMEVILTRMRIPLPYGSVALMPVRPEEYRGQDIVPIFIGRKAPSNYTTSSFEKDGMFSEGDVMVWIHD---VLCHVWVIEYDVPNVLPVDEK 410
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE) HSP 1 Score: 206 bits (524), Expect = 4.820e-55 Identity = 162/498 (32.53%), Postives = 203/498 (40.76%), Query Frame = 1
Query: 1324 YKTQRIAFNELKLTIQDGEVLCV-VDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAE---PMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGK-----------------------------NVSDSEGAITKEYARQMVTNTRWTVASSEDLCKKLAKALNFLLRPATSEERDAFVMERGGRTGGTEQLLMTKASYSGRGTQPATYTFLLTKLANSVLGRDYQFVRADQVSESFRNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSCFCGECLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPDYSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQFRAVPLTCIAGLGQGISG 2718
+ T+RI N L G C + QE+LQL +QDEVQ QHW TIFPC I+F+ GRVW YSFQ+LSD +RVGA M RA FTDNCAKQFKCRFHFGW+A ++ D G +T VH+EHH+FG+CHGK + SD +GA TK Q + N W V LC L +A++F+L T EE F GG +QLLMTK + G TFL+TK N++LGR Y F A + + R+++RS +KAI+V GCQ SKI+ DGMF+ GD MVWV D V VEY VPN + E R++PLT +AGLGQGI G
Sbjct: 10 HPTERIQRNSPYLR---GRYGCFRLRLQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGG-DQLLMTKL-WGGESRCKERKTFLVTKKPNTLLGRKYIFQAAGDILPAVRSASRSESKAIKVEGCQAISKILCK-------------------------------------------------------------------------------------------------------------DGMFSEGDVMVWVHD---VFSHVRGVEYDVPNVLPVDEN-RSMPLTSLAGLGQGIEG 369
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE) HSP 1 Score: 158 bits (399), Expect = 3.070e-39 Identity = 108/264 (40.91%), Postives = 144/264 (54.55%), Query Frame = 1
Query: 2146 RNSARSSAKAIEVAGCQTASKIIATNTPGVIATYEFSCFCGECLEHRTENCPLVRKGIMEGPKEFARRVGHVNDDLLSAKEQDLTEMFERMKGDLPFGSTALLRVDSSDHCGEDIVPVLLARKAPSIWSPDYSADGMFTHGDWMVWVVDLQQVSERRERVEYIVPNDISSKEQFRAVPLTCIAGLGQGISGYMERSPYPLVCEDSTHFVMRDGVLENARSSVVLMSTSPSSAFKGFSPVGLTEEELTRATVASPRFSLGTEVER 2937
R+++RS +KAI+V GCQ SKI+AT TPGV+ATY + GE TE C L R+GIME P E++RR NDD + +E+ + MF R + LP+GS AL+ C APS + ++ DGMF+ GD MVW+ D + VEY VPN + E RAVPLT +AGLGQGI GYME +T + MR V+++ARS++V MS P AF P + + + RA V F ER
Sbjct: 18 RSASRSESKAIKVEGCQVISKIVATETPGVVATYTRRPWKGE-----TEKCNLFREGIMEAPAEWSRR--RSNDDEETTRERKMELMFTRTRNPLPYGSVALM-------C------------APSDRTSSFAKDGMFSEGDGMVWIHDFFR---HVRGVEYDVPNVLPVDEN-RAVPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVDSARSNLVFMSKRPQDAFVDCRPAKMRKIDRRRAHVQPSLFEACNSGER 251
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A6H5JW27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW27_9PHAE) HSP 1 Score: 103 bits (258), Expect = 5.190e-22 Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 724 VLWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHKSACVSGHCLHCQRKQDRFFECPRNKGGLQRQVQPAVSTTPATDATDE 1074
V TLH GDT CTC C C +GAC +LP+ ++ SVH M SD+ L K LY ++ ++AH+S CVSGHCL QR+Q FF CPR+ R+V + + A +T E
Sbjct: 9 VFLDTLHHGDTSDLGCTCTCGFCSNGACRTFLPFATAKSVHGMGVLSDLLLSEKVFLYRGEEANDVKAHRSTCVSGHCLTGQRRQAAFFGCPRHHVSTDRRVLASSAALGAMASTSE 125
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Match: A0A815R815_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815R815_9BILA) HSP 1 Score: 74.3 bits (181), Expect = 3.500e-10 Identity = 52/203 (25.62%), Postives = 93/203 (45.81%), Query Frame = 1
Query: 1327 KTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSED---LCKKLAKALN 1926
+ Q F ++K +D V+C VD+ E + +QD++QS HWGK +IF +F G SF ++S+ +T + V + ++++ I +L + F+DN + QFK R+ ++ + + +D + YF + HGK V D G K + +S+ED +C++ KA+N
Sbjct: 139 RKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDQIQSAHWGKKFVSIFTAYAWFGGSGGDG-QSFGLVSNSITHNKYSVITCLEIIINEIISMIL------DVNEVIFFSDNASSQFKNRYVINYLTNM-LDTMD---------IDFNWSYFASAHGKGVVDGVGGTLKRLVWLEIMAGE-QCSSAEDFVKICRQKTKAIN 323 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1193.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1193.6.3 >prot_P-littoralis_Contig1193.6.3 ID=prot_P-littoralis_Contig1193.6.3|Name=mRNA_P-littoralis_Contig1193.6.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1002bp MRRALLSAVCGPTTSYMEVQEFVGGTLSRKCFKDAMDKRETAFGNGFGNGback to top mRNA from alignment at P-littoralis_Contig1193:40955..49601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1193.6.3 ID=mRNA_P-littoralis_Contig1193.6.3|Name=mRNA_P-littoralis_Contig1193.6.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8647bp|location=Sequence derived from alignment at P-littoralis_Contig1193:40955..49601- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1193:40955..49601- >mRNA_P-littoralis_Contig1193.6.3 ID=mRNA_P-littoralis_Contig1193.6.3|Name=mRNA_P-littoralis_Contig1193.6.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3006bp|location=Sequence derived from alignment at P-littoralis_Contig1193:40955..49601- (Pylaiella littoralis U1_48)back to top |