mRNA_P-littoralis_Contig1193.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.200e-59 Identity = 100/241 (41.49%), Postives = 152/241 (63.07%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSSS 723
WLAG + DG +A++TAY ++ +N C L KWP E E +A + S +D V++ CVGA DG+ VR+ KPSAKE P+ ++ GHK G+N Q +CDA+Y I+A N P S NDR A+ + FD L+ +P ++++GDAAYGA+ ++ VP+PG L A QDA N++ SQ RM I+QT+GI++++W +L RP++V + VV+A+ RLHN+ R + + P+ +
Sbjct: 107 WLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWP--EGEDAARAAELFRNRSSMD-VVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTEN 344
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 201 bits (510), Expect = 6.820e-59 Identity = 104/240 (43.33%), Postives = 150/240 (62.50%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSS 720
+LAG V DG +A++TAYA + R +D IN L WP E L + G Y R S + V++ CVGA DG+ VR+ +PS + H P F+ GHK G+N Q +C+A+Y IIA N P S NDR A++ + F ++++++P YI+GDAAY A++++ VPYPG L QDA NF+QSQ R+ I+Q FGI++K W +L RPL + L + V++++ RLHN+LR R P S
Sbjct: 114 FLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQ--CGMYRRRST-NGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPRS 350
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5J641_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J641_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.280e-58 Identity = 93/136 (68.38%), Postives = 106/136 (77.94%), Query Frame = 1
Query: 322 QVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSSSAR 729
QVICDA Y++ AAC NTP S N RQAY+EA+FD LVE +PG Y ++GD AYGAT+KM VPYPGCDLDADQ A NFFQSQGRMCI+QTFGI+ V LRNTA VVHAITRLHNYLR CR+EPP ++AR
Sbjct: 3 QVICDADYIVTAACCNTPGSTNVRQAYKEAEFDQLVEGLPGNYDVVGDTAYGATDKMLVPYPGCDLDADQQAFNFFQSQGRMCIEQTFGIM------------VHLRNTASVVHAITRLHNYLRRCRSEPPPATAR 126
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.520e-55 Identity = 101/231 (43.72%), Postives = 139/231 (60.17%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLR 693
+LAG V D +A++TAYA + R +D IN +L KWP + E Y R S + V++ CVGA DG+ VR+ P K H P F+ GHK G+N Q IC+A Y II N P S NDR A++ + FD+L+ +P +I+GDAAY A+N++ VP PG L QDA NF+QSQ R+ I+Q FGI++K W +L +PL + L V++AI RLHN+LR
Sbjct: 118 FLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDA--EAQAELYRRRST-NGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLR 345
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.400e-49 Identity = 80/185 (43.24%), Postives = 125/185 (67.57%), Query Frame = 1
Query: 169 YERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSSS 723
+ T+ + V++ CVGA DG+ VR+ KPSAKE P+ ++ GHK G+N Q +CDA+Y I+A + P S NDR A+ A FD L+ +P ++++GDAAYGA+ ++ VP+PG L A QDA N++ SQ RM I+QT+GI++++W +L RP++V + VV+A+ RLHN+ R + + P+ +
Sbjct: 8 FSATAALVDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTEN 192
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5J5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V5_9PHAE) HSP 1 Score: 156 bits (395), Expect = 7.300e-45 Identity = 77/108 (71.30%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQ 324
WLAGHGVS AADGP MA +TA+AKI +GLD IN+ GRLRIKWPR E ELQ KA F R SQ+DPVLK CVGA +G+LVR KKPS EHP P RFF GHKMTVG+N Q
Sbjct: 43 WLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDYGRLRIKWPRKERELQAKAQRFAARRSQLDPVLKRCVGALNGLLVRRKKPSITEHPYPHRFFSGHKMTVGMNYQ 150
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.320e-34 Identity = 78/229 (34.06%), Postives = 123/229 (53.71%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNY 687
WLAG + DG +A++TAY ++ +N C L KWP E +L E + T+ + V++ CVGA DG+ VR+ KPSAKE P+ ++ GHK G+N QV S NDR A+ + FD L+ +P ++++G+AAYGA+ ++ VP+PG +Q T+GI++++W +L RP++V + VV+A+ RLHN+
Sbjct: 118 WLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPP--SFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQVC----------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPXEQ----------------TYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNF 311
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: K0SNE9_THAOC (DDE Tnp4 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNE9_THAOC) HSP 1 Score: 112 bits (280), Expect = 1.090e-25 Identity = 75/229 (32.75%), Postives = 116/229 (50.66%), Query Frame = 1
Query: 85 LDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPC----PDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVES-----------IPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHR--PLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSS 720
+D I+ L IK+P E++ + A GF R SQID + CVGA DG+L+ I KPS+++ P +FF G K GLN Q +CDA+ + P S +D A+ E+ +E GK + GD AY ++ M P+ +DA NF+ SQ R+ I+ FGI++ +W +L + P+ + + T +V A+ +LHN+ R E S+
Sbjct: 33 VDAIHQSPELDIKFPETEADQRRVAEGF-RRKSQID--IDCCVGAVDGILIWIHKPSSEDEKVIRIGPKKFFCGRKKKFGLNMQGVCDARGYFLDVEIRFPGSSSDFYAFDESSLKKKLEQEGFLGTAVSMDFGGKLCLFGDNAYVQSSYMCTPWKAV-TSGPKDAFNFYHSQVRINIECAFGILVHRWGMLRKAIPVGISVSRTTRLVLALCKLHNFCIANREEVASA 257
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.670e-25 Identity = 68/220 (30.91%), Postives = 101/220 (45.91%), Query Frame = 1
Query: 1 WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQEKAVGFYERTSQIDPVLKHCVGAPDGVLVRIKKPSAKEHPCPDRFFFGHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVV 660
WLAG + DG +A++TAY ++ +N C L KWP + V++ CVGA DG+ VR+ KPSAKE P+ ++ GH+ V ++GDAAYGA+ ++ VP+PG L A QDA N + SQ RM I+QT+GI++++W +L RP++V + VV
Sbjct: 118 WLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD-----------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.530e-24 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 292 GHKMTVGLNCQVICDAKYVIIAACYNTPRSMNDRQAYREAKFDSLVESIPGKYYILGDAAYGATNKMRVPYPGCDLDADQDALNFFQSQGRMCIKQTFGIVMKQWPLLHRPLQVPLRNTAGVVHAITRLHNYLRGCRNEPPSSS 723
GH + +CDA+Y I+A N P S NDR A+ + FD L+ +P ++++GDAAYGA+ ++ VP+PG L A QDA N++ SQ RM I+QT+GI++ + ++ VV+A+ RLHN+ R + + P+ +
Sbjct: 130 GHVIARSTAYHAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTEN 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1193.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1193.5.1 >prot_P-littoralis_Contig1193.5.1 ID=prot_P-littoralis_Contig1193.5.1|Name=mRNA_P-littoralis_Contig1193.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp WLAGHGVSTAADGPRMAQNTAYAKICRGLDTINNCGRLRIKWPRIESELQback to top mRNA from alignment at P-littoralis_Contig1193:38858..40294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1193.5.1 ID=mRNA_P-littoralis_Contig1193.5.1|Name=mRNA_P-littoralis_Contig1193.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1437bp|location=Sequence derived from alignment at P-littoralis_Contig1193:38858..40294- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1193:38858..40294- >mRNA_P-littoralis_Contig1193.5.1 ID=mRNA_P-littoralis_Contig1193.5.1|Name=mRNA_P-littoralis_Contig1193.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=729bp|location=Sequence derived from alignment at P-littoralis_Contig1193:38858..40294- (Pylaiella littoralis U1_48)back to top |