mRNA_P-littoralis_Contig763.33.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig763.33.1
Unique NamemRNA_P-littoralis_Contig763.33.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig763.33.1 vs. uniprot
Match: D7FVU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU7_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.960e-75
Identity = 118/145 (81.38%), Postives = 131/145 (90.34%), Query Frame = 1 
Query:  508 RDRFVVVGLRGASVRKAAQLGSPVLRTLRRGTIVTVSEVRNRRAHIVKPVDGWASLCTEDGYCIIEPTKRNTRYKVIYDDGIIVRSEASIETGAVVKIAPPGSILKATGRTQIVGGVERVQIDSGWVSMRLREDNGVGARLLAPL 942
            RD+FVVVGL+GASVRK  +L SP+LRTLRRGT+V+VSEVR RRAHIVKPV+GWASL TEDGY IIEPTKR +RYKV+Y+DGIIVRS A IETG VVKI  PG ILKATG+TQI+ GVERVQIDSGWVSMRLREDNGVGARLLAP+
Sbjct:    5 RDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVNGWASLSTEDGYGIIEPTKRCSRYKVVYNDGIIVRSTAKIETGEVVKIVHPGDILKATGKTQILDGVERVQIDSGWVSMRLREDNGVGARLLAPM 149
[Close]
BLAST of mRNA_P-littoralis_Contig763.33.1 vs. uniprot
Match: D7FVU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 5.520e-61
Identity = 105/196 (53.57%), Postives = 135/196 (68.88%), Query Frame = 1 
Query:  391 LLRCVEDD-----AAANGRSPPVEYNC------FCFPVGDDELVFIPDAKRDRFVVVGLRGASVRKAAQLGSPVLRTLRRGTIVTVSEVRNRRAHIVKPVDGWASLCTEDGYCIIEPTKRNTRYKVIYDDGIIVRSEASIETGAVVKIAPPGSILKATGRTQIVGGVERVQIDSGWVSMRLREDNGVGARLLAPLN 945
            L  CVE D        N  + P ++        +C      E VF+PDA R+++ VVGL GA+VR  A+L SPVLRTL +GT+V V++VR+RRAHI+KP+DGWASL TE GY I+E   R T+YKV+Y +GI VRS  SIE G +V+IAP G++LKATG+T+I   VERV+++ GWVSMRLRED G GA LL  LN
Sbjct:    8 LCFCVEGDDKEDALVDNDSNNPYQHEHSKRHAKWCVDDSATERVFVPDASRNKYQVVGLGGATVRMTARLDSPVLRTLPQGTVVVVAQVRSRRAHIIKPMDGWASLSTESGYVILEAIARPTKYKVVYREGIFVRSSPSIEDGRIVRIAPCGTVLKATGKTEIFDAVERVEVEDGWVSMRLREDKGSGAPLLMALN 203
[Close]
BLAST of mRNA_P-littoralis_Contig763.33.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 4.590e-47
Identity = 90/156 (57.69%), Postives = 121/156 (77.56%), Query Frame = 1 
Query:  481 ELVFIPDAKRDRFVVVGLRGASVRKAAQLGSPVLRTLRRGTIVTVSEVRNRRAHIVKPVDGWASLCTEDGYCIIEPT-KRNTRYKVIYDDGIIVRSEASIETGAVVKIAPPGSILKATGRTQIVGGVERVQIDSGWVSMRLREDNGVGARLLAPLN 945
            E VFIP A R+++VVVGL GA+VR + +L SPVLRTL +GT+V V+++R+RRAHIVKP+DGWASL T   Y I+EP   ++T+YKVIY +GI VR   S+E+  + +IAP G++LKATGRT+I   VER++++ GWVSMRLR D   GA LL+PL+
Sbjct:  394 ERVFIPKASRNKYVVVGLVGATVRVSKRLDSPVLRTLPKGTVVEVAQIRSRRAHIVKPIDGWASLSTVSSYRILEPPITQSTKYKVIYPEGIFVRRMVSLES-RIARIAPFGTVLKATGRTEIYDAVERIEVEDGWVSMRLRND--TGAPLLSPLD 546
[Close]
BLAST of mRNA_P-littoralis_Contig763.33.1 vs. uniprot
Match: A0A835YRV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.410e-27
Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 1 
Query:  502 AKRDRFVVVGLRGASVRKAAQLGSPVLRTLRRGTIVTVSEVRNRRAHIVKPVDGWASLCTEDGYCIIEPT-KRNTRYKVIYDDGIIVRSEASIETGAVVKIAPPGSILKATGRTQIVGGVERVQIDSGWVSMRL--REDNGVGARLLAPLN*ERARS 963
            A  ++F VVG  GA+VR    L SP+L TL  GT+VTV  V+ RR  IV+PV GWAS  TE GY I+E       RY+V++ +G++VR+ A  +    V++ P G I++ TG    V GVERV+ID GWVS+      D   G  LL  L   ++RS
Sbjct:   26 AAPEQFRVVGRSGATVRGGENLDSPLLCTLSPGTLVTVDLVKGRRCRIVEPVKGWASTSTEKGYVIVERVDSARPRYRVVFSEGVVVRTAADPDNSEPVRLLPSGEIIEGTGEVVSVEGVERVRIDDGWVSVTKPPNADGTPGEALLHKLTEAKSRS 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig763.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVU7_ECTSI4.960e-7581.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVU8_ECTSI5.520e-6153.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G246_ECTSI4.590e-4757.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRV6_9STRA4.410e-2743.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig763contigP-littoralis_Contig763:126822..133940 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size971
Hectar predicted targeting categoryother localisation
Exons7
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_002210.1
Cds size573
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig763.33.1prot_P-littoralis_Contig763.33.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig763 127250..133917 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791577.7620468-UTR-P-littoralis_Contig763:126821..1270361680791577.7620468-UTR-P-littoralis_Contig763:126821..127036Pylaiella littoralis U1_48UTRP-littoralis_Contig763 126822..127036 +
1680791577.77279-UTR-P-littoralis_Contig763:127052..1270961680791577.77279-UTR-P-littoralis_Contig763:127052..127096Pylaiella littoralis U1_48UTRP-littoralis_Contig763 127053..127096 +
1680791577.784905-UTR-P-littoralis_Contig763:127133..1272491680791577.784905-UTR-P-littoralis_Contig763:127133..127249Pylaiella littoralis U1_48UTRP-littoralis_Contig763 127134..127249 +
1680791577.8695452-UTR-P-littoralis_Contig763:133917..1339401680791577.8695452-UTR-P-littoralis_Contig763:133917..133940Pylaiella littoralis U1_48UTRP-littoralis_Contig763 133918..133940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791577.7953982-CDS-P-littoralis_Contig763:127249..1273761680791577.7953982-CDS-P-littoralis_Contig763:127249..127376Pylaiella littoralis U1_48CDSP-littoralis_Contig763 127250..127376 +
1680791577.8119934-CDS-P-littoralis_Contig763:131327..1314281680791577.8119934-CDS-P-littoralis_Contig763:131327..131428Pylaiella littoralis U1_48CDSP-littoralis_Contig763 131328..131428 +
1680791577.8322954-CDS-P-littoralis_Contig763:132362..1324911680791577.8322954-CDS-P-littoralis_Contig763:132362..132491Pylaiella littoralis U1_48CDSP-littoralis_Contig763 132363..132491 +
1680791577.8445857-CDS-P-littoralis_Contig763:133460..1335651680791577.8445857-CDS-P-littoralis_Contig763:133460..133565Pylaiella littoralis U1_48CDSP-littoralis_Contig763 133461..133565 +
1680791577.8551388-CDS-P-littoralis_Contig763:133806..1339171680791577.8551388-CDS-P-littoralis_Contig763:133806..133917Pylaiella littoralis U1_48CDSP-littoralis_Contig763 133807..133917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig763.33.1

>prot_P-littoralis_Contig763.33.1 ID=prot_P-littoralis_Contig763.33.1|Name=mRNA_P-littoralis_Contig763.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=191bp
MSWLSLLRCVEDDAAANGRSPPVEYNCFCFPVGDDELVFIPDAKRDRFVV
VGLRGASVRKAAQLGSPVLRTLRRGTIVTVSEVRNRRAHIVKPVDGWASL
CTEDGYCIIEPTKRNTRYKVIYDDGIIVRSEASIETGAVVKIAPPGSILK
ATGRTQIVGGVERVQIDSGWVSMRLREDNGVGARLLAPLN*
back to top

mRNA from alignment at P-littoralis_Contig763:126822..133940+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig763.33.1 ID=mRNA_P-littoralis_Contig763.33.1|Name=mRNA_P-littoralis_Contig763.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7119bp|location=Sequence derived from alignment at P-littoralis_Contig763:126822..133940+ (Pylaiella littoralis U1_48)
TAGAAATACCACGGGTCACAACCCGGTTGGTATCATATCATACTCTTGAA
ACAAACTGCTGTGTTGTCTTGCCAGGTCACTCATACATATTTGCTCTGAA
GACAGGTGACAACGACGGTCGAAGCCAGTGGTCGAAGCAGCAGGAGCAGC
AGGAGCAGCAGAAGCAGTAGAAGAATTTGAAGCAGCAGGAGCAGCAGGAG
CAGAAACAGCAGGGGGTAGGAGCTGCAGTAGCAGCGGCAGCAGCAGCAGC
AGCGGAGGTAGCAGCAGCAGAGGTAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGTAACAGCAGCA
GCAACTCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGAAGAAACAGCAGCT
GGAAGCATCGTGTTCCACTCCGTGGTAGATGTCTTGGCTGTCTCTGCTCA
GATGTGTCGAAGATGATGCTGCGGCGAACGGGAGGAGCCCTCCAGTCGAA
TACAACTGCTTCTGTTTTCCAGTTGGGGACGACGAACTCGTATTCATTCC
AGATGGTGAGCGGCAAAAACAAAAAAAGCAGCAGGGAGAGTCACGCAGAA
GCACAGCAGAGAACAGAGATTTAAGACAGCAGGTACGTACTTGTAGACAG
AGCGGGGAAGGGCTTGCTGCCTTTGTGTCGAGTATGAACGGTATAAATAT
ACGCTGTTATGGCAGGGTACAGCAGCCGTATCTAGTAGGAACATCATATG
ATACATGAGCAGGTGTGAGTCGTCGGTGCACATCCGGCTTGCTGACCTCT
CTGATTTGATTTGATTTGACAGTCACATGCCACAAAATGTTACCATACGA
GGGAACTTCGTAGAAGTAATGTTTTACGAAGTATCTACAAGGGCTCTAGA
CGCGGGGGCCTGACGACCTCCTCGTCCTCACATACACACACCAAGGGTTG
CAGCATTTGCAGACGCAGTTGATTTTTATTTCGTGTTTAAAGGTCAGATT
GTGATAATATTGCAACAAACAGTGCAGTACTAGTGGATCGGGGTTGAGAA
GCAGCATGTGCGTTGGAGGGCCGCTTCTCAAATAACTGCGTTAAACCGTG
TGCAATGCTGTTTGGTGGCGTATACCGTATGTGCCGTAGCTGCAGCGCTG
CTGCTGAAGCAGAACAGCTGTTGTTGTTGTGCTCCGCCAGCACAACGAAT
ACAAAAAAAAACCCTCTCATATTTTTCACAAAAAAGGGACACCGACAGCG
CGCCTCCGACATTGCTGTGCGCACAGGACACGAGCGGCGGGGAACCCAGC
AGCAATGGGTAGGTGCTATTTACCTTACTCTCATCAGTTGAAGCCCTTGG
TCGTAACGATCTGTGCTGAACTGGTGTGAAAGTGTTGCAAAATGTGACCA
TTATCTCAGACAGACACATAGACAGACAGACAGACAGACAGACACCATAA
ACCTCGAAATTTAAGTAAAGGCACCCCTGTCTCAGTTTATTTATTTATTT
TTATTCGCACATACACTCACACCTACACATAACGACAAGTCGGTACGAAT
TCGAAGCAGTTCGACAAGGAACTTACACTTCGCTTCGCTCGTGGCCTGCT
TCTCAATATGAATTGGCCCAGAACTTGCCCACTTGTGACAGCAGAGCCCG
CATAATACGTACATGCGTTTGCATACCCTTTTAATCCAAATCTGTTGTCA
CACCACCTCCGATATCGATAGATGATAGCGATGACAAATGTTTATGTAGC
CGACAAATAGCCATAGGCGTTCAAATTTTCGGAGCTATGGCGGCGGCACA
GCAGTGTTCCTTTACACCGCGTCTATCTTTTTTGTGTCTGTTGTCCAGGG
TATAAGGCACATCTTCTCTCGTATCCACGTATCACACGATCCCCAAGTTA
ACAGCACAAAGATAAATTGTCAACACTCAACACATGATGTAACGTGTGTC
TCACAAGACGACCATCAAATTGTCTTGTTGAGCCTGATACCCTCAGGGGA
GCTGCAACAGTACATCATCTGATGAGTTATAGAAACACTGGTAGATGTAT
ATTATTCTTTTGTGTTCGTTGCAATATCTACTCCAGACCCTCGTCTGGAT
AGAGGTGAACACATTAATGTGTTTGGAAGTTAAAAAAAAGAAAAGTATGT
GTCGATATCAATCAGCAATACTCGGAATACTAGCTATTCCCGAGGATAGC
AGTAGTGGCGTAATAATGACTGGCGTGTCCATTGTCGTAGTTGAAACGAT
CCTATAAGCACCTGGACACGTTCTAGTGTGCGGGTGTGGGTAACATGTTA
ACGTTTTTGAAGTGAATAATAACTTTGTCACAGGGAGGACCATTTTGAGG
ACCATTTTCCCGCTTACTTGGAAGTTGAGGACTTTTTTTGCCATTTCACA
GCAGGACCTTTTGAGTACGAAGTAGCTTTCTTGAAACTGCTGCAGAGTTT
TCGTTCGTTATGTTGCAATGAAAATACCCGCGTGCCATATTTCCTCTCTC
TGTGTGCGGGCCGCAACAGCATAACATGATTTCATATGACAGCATATTTC
AATTCGAACGCATTTGGAACTGATAACAATCCTACAAAATAACTCCCCAA
ACACAGGGAGAGGAAACAAATAATATGTGCCGTAGAATATGCTTCGAGGT
ATACCGGTATTGTGTTGTTGTGTGTTCGTTCAAAGACTCGCTCTTGGTAT
GATGGTAGTATCTGAGGCACTGTTAGGTAGTTTTGTTAGCATGTGTGAAG
CAAATCATGCACCGCCACTGATAGATGCTGCTGCATCAGCAGTGTAGTCG
AATGAGGCATATTAATACAGCAATACACTACTATTATTTTAATTTTTATA
CTGCTGCAGCATCAGCAGTCAGTCAGTCGTGGAGGCATTACCGGTAGGCA
ATTCATCGCGAGTTGAGGACCTTTTTCCATTTTTTTGCAGGACCTTTTTG
TTTTTGAAAGCAGTCGGAGCAGCAGCAGTAGTATAGATAGGGGCTAGCAT
GAATGAATGAAGGTCTGCTGCAAGCAGTTGTAGTTGCATATTATTGTAAG
GCATTATATGTTGTTGATTCTCACATAAGCTCACTACTGCCGCAGTCTAG
CCCGTGGTCACAAACCAGGCACATATCGTGTAGGGACGAAAAAAAATAAA
AATAAAATAAATGGACTGTGATCACCCACAGTTAAAATCAGATAGGGTAC
CGTTAGGGTACCATCTGTGGTGCCCAAAGTACCAAACAAAATACAGAAAA
AAAATAACAGGTTCGAAAGAAAAAACAAAAATTTAAAACGGTACGACAAA
AAAAAACAAAACAGACAAACCTCAACCATAACCATACACTTCGAAGTACT
TCGTACATCGAACCAGGGCCCAGGGCCATGACCGTCCAAGGCAAAGGCAA
ACCAGGGCGATGGTCCAGTAACGACATGATCGATAGACGAAAGACAAAAA
TAAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGAGGGAGTG
CACTCGCACACAAACATAACAAACAGGCCGCCAAACAAAGAGGAAGCAGG
GGAACGAAAAGGGAAAGCAGCAGCAGCAGCAGCACAGCAGTCGTGGCAGA
GCATGAGGCAATGAATATACCCTGATGATGCAGGCAGTTGCCGTGGCTTG
AGGCATCAGATGCACTCCGCTCTTGCTACTTCTTCTTGTTGTGACCATAA
AAAATCCCTATTTTAGCGAGAGCAGACGGAATTGTAAGACACGAACTTTT
CATGTCGTAACAAATGCAATTTCTTCTCCTCTTGCTCTATATTTCAGCCT
GGTCTGTGTCCTCTGTGTACTATGCTGCGAAATCCTCTACACACGCTCAA
TCTGGTCTTCCTGTTACTTGTCACGCCACAACCCACCCACACGGAACCTT
CCGAGTGTGCCAAGGCACATCGTGGTCCGTCCGTCGGAGCAACAGGATGT
GGCAGTCAACTCCACAACATGCATAACCCTTCCCGAGCGTTGTGAGACTT
AAGGTCTCCGTCGCAGCGTCTTGAAATTAATGGACCCAAAATAAGATTTT
TGCCTCAGGAATTTTTTACCGCCCCTGTCAGTCGATCCTTACCTGCACCA
GCAATTTGTCAACCACACGATGACGATACAGCAGTACTGCTTGCATGTGG
ACTTTACTTGAAGATTGCAAATAAGGTAATATATGGCCCTTACCTTCTCT
ACATATCGTGCGTTCGTTGCCCTGAGTACAGGACGAAATGCTCAACCAAC
CAACCAACCAACCAACCAACCAACCGCCCACCCACCTCCGATGCTGCACC
TCTCACCGCCAACGCACCGCCACCGCGCGCCAACGCTCTTCTCTCTTTTG
TGTGTTTTGTGTGTTTTGTGTATTGTTTGTTTGTTTGTTTATCGCTGCAC
GTGTGCGCGCGTGTGTGTGCCGCGTGTCCTTCCTGCCCCCCCTGCTTGCT
TGCCGCTTGGTCATGTCATACGTGCAAACATACACGCGTGTCACATGTCG
ATCCAGCGAAGAGAGACAGGTTCGTTGTGGTCGGGCTGCGGGGGGCCTCG
GTGCGGAAGGCGGCTCAGCTTGGCTCGCCGGTCTTGAGAACGTTGCGACG
AGGCACGGTGAGCCGTCGGTTGCGTTGCCGAGAGTTCGTTTGGTCGCCCG
AGCGCGACGCGCGCGTGATAATGTACTATTCTTATATGCGAATGCCTCAC
TCTCTCTTTATGTCTCTCTACGTCTCGCTCTCTCTCTCTCCACACGGGGT
TGCTGCGAATGCGGGTGAGTTTGCGGGTGTAGGACAGCCACTGTTCTCGC
TCGTATCAAACATGATATTGTTATCATACTTCGAAGTACAGCAGTGCTTC
GTGAAGTATCATATACAAAAAAATGAAGGCTTTCGAAGGGTATGATGTGA
TGTCATGTGTACACACATTCATCTCTTTTTTAATTTGTGCTGTGTTTAGT
ATTTCGTTGGTTGGTTGTTTCCTGGAGAAGAAAGGCAGCAGGCAAGGGGA
GTGCCGTTCGTTGATACATTCCCTCATGTATCTGCTTTGTACTTCGTATC
ATTTATCGTTTGTGTGAAATAGGCGTTCTTTTGGTAACCCGGGTCTTTCG
ACACCGAAAGGACGATCCGTCTCCACAATGGTGGCCGGCTGTGGAGCGGG
TTGTCGCCAAGCACTGCTGCTTGGCATGCATGCATGCATGCACGTTTTTG
AAGGCAGGCAGGCAGGCGGGCATGCAAACGCTTGCACTGTTCAAGGGGGA
GCCAGGCGCCACGAAACGAACGCTTGGTTGCCCGGGGGCTCAATTTTTGG
TTTGTTTTTTGTGTGCATGTCGGTCTTCAGAAACGAAATTTTTCGTCGAC
CTGCTGCGTGTGTGTGCGATACACACCCTTATCGTCAAACGTGTTCCCCC
TTTTGGAAGCCGCCCATCCCCTGATTTTGTGACACCGGTGTACCCTTTTT
GATCCCGTACTTGGATGCGCCTGTACCTTACCTTACCCTACCCTACCCTT
GTCGCTGGCCGCCGCCATCTTGTTTCCGAAATTGACCACAGATTGTCACT
GTGTCAGAGGTGCGGAACCGGAGGGCGCACATCGTGAAGCCGGTCGATGG
GTGGGCCAGTCTGTGTACGGAAGACGGTTACTGCATCATCGAGCCGACCA
AACGGAACACCAGGTACAAGGTGAGCGGAAGAGGAGGAGGGGGGGGGGGA
CAAAGAGGAGTAGTCATAAACATTGCAAACATTTTGAGAGGTTGAGTGAG
ACGGATAGAGAGAGGGAGAGGCGGGGAAGTGAAGGAGGAAGTAGTGCGTC
CTTGAATAGATACCTCTGGATGCAGTACGTATCGAAGTATCGTTTTCTAC
GCCACGGGCACACGGGCGAAAAAATGTAACTGTATGTGTGATCGTTCGAA
CCTCAAAATGTTCGGACGTAAAAAAATGGCGAGTAAAAACAAATGCGCAA
AATCTGCCGGCGTACCCTGGTGGATAGGGCTTCAACACCCCGAAGACATC
TCGCCAGCATATCTTATGATGTTTGGTAGAAATATACCTGCTTCCTTCTC
TTCTTCTGTACCCAACCGTGGAAAAACAAAAACCCAAACAAGAGACAGAC
GGAAAACTTGTATACGAAGTTTCCTGTTCTTCATACTGTGTGTGTTGTCT
CCCTTTAATTGGACGCCACTCTACACTTCTCGGGTAGGTCGACGCTCCAA
CTGGGGTCACACAGGGAGAAGTCAACACAGGAGTTTTTTTTTTTTTTCTC
TACTTCCCTCTGCGGTGCTTGCCTTGTTTTTGGTTGAGGTTTTATCCCGG
GAAAGGGGACAGCGATCCCTTTCCCTCGTCGATGGTACGATCGAATGTTG
TTTACTCACGAATTAATCGCTTTCCACTTTCACCGGCATTGTGAGAAGAA
AACCCAGGTCGTGTTACTGCACTGGGGTTCGAACTCACGCGTGAATGTCA
GGAGGTTACGTGGATTACCAACTGAACTACACCGGTTGGTTCAGTTGGTA
ATCCAAGTAACATTCTGACATTCACGCGTGAGTACTGTAATAAGTAAATC
ACGAAACTAAGAAATAAAGAATAAGAAATAAACAAACGAAATTAATCCAA
CATGTATTTATCGTGTGTGCATTTTATTGTTCAAATTAGGTGATCTACGA
TGACGGGATAATCGTGCGAAGCGAGGCGAGCATCGAGACCGGCGCCGTGG
TGAAGATCGCGCCACCGGGCTCAATCTTAAAGGCAACCGGCAGGGTGAGA
CGAAAATGAAACGAAGTTTTGACGATTTTTTTCCGTTTTTCTTCACTTTT
ACCTCGGTACTACTTACTGCGCTGCACGATTAGCTCTAGTCTTGCCAACC
AAAAGGGTTCGATTCGGCAGTTCTTCGGTTTCGACGACGCACCTCCCCCC
CCCCGCCGCTCTCCGAACTCGAATTCTGTTGTCGGGACCCCCCAAATTTA
TTTTGGCTTGCGGGTGGGTCTGTTTCGACCGACAGACTCAAATAGTAGGA
GGGGTAGAGCGAGTGCAGATCGACTCCGGTTGGGTTTCAATGCGGCTTCG
GGAGGACAACGGGGTGGGAGCACGGCTCCTCGCGCCGTTAAACTGAGAGC
GGGCAAGATCAAGCGGGAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig763:126822..133940+

>mRNA_P-littoralis_Contig763.33.1 ID=mRNA_P-littoralis_Contig763.33.1|Name=mRNA_P-littoralis_Contig763.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=573bp|location=Sequence derived from alignment at P-littoralis_Contig763:126822..133940+ (Pylaiella littoralis U1_48)
ATGTCTTGGCTGTCTCTGCTCAGATGTGTCGAAGATGATGCTGCGGCGAA
CGGGAGGAGCCCTCCAGTCGAATACAACTGCTTCTGTTTTCCAGTTGGGG
ACGACGAACTCGTATTCATTCCAGATGCGAAGAGAGACAGGTTCGTTGTG
GTCGGGCTGCGGGGGGCCTCGGTGCGGAAGGCGGCTCAGCTTGGCTCGCC
GGTCTTGAGAACGTTGCGACGAGGCACGATTGTCACTGTGTCAGAGGTGC
GGAACCGGAGGGCGCACATCGTGAAGCCGGTCGATGGGTGGGCCAGTCTG
TGTACGGAAGACGGTTACTGCATCATCGAGCCGACCAAACGGAACACCAG
GTACAAGGTGATCTACGATGACGGGATAATCGTGCGAAGCGAGGCGAGCA
TCGAGACCGGCGCCGTGGTGAAGATCGCGCCACCGGGCTCAATCTTAAAG
GCAACCGGCAGGACTCAAATAGTAGGAGGGGTAGAGCGAGTGCAGATCGA
CTCCGGTTGGGTTTCAATGCGGCTTCGGGAGGACAACGGGGTGGGAGCAC
GGCTCCTCGCGCCGTTAAACTGA
back to top