prot_P-littoralis_Contig763.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig763.18.1
Unique Name	prot_P-littoralis_Contig763.18.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	196

Homology

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BLAST of mRNA_P-littoralis_Contig763.18.1 vs. uniprot
Match: D7FVV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV3_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.420e-22
Identity = 68/124 (54.84%), Postives = 79/124 (63.71%), Query Frame = 0

Query:   74 ERLPTIDLQRS-RGFSNADMDADMVSILYQQQQLRVERQLSLPDQHPRSNSQE-SYGQTDQEDAESEDMGSRSDRHSSIEVRRTDVAHFAVDSTSPEQWSTNPRD--GKGYRRLQGFAFGQNLR 193
            ER  TIDLQRS RG SNAD  A     L QQ++LR++R LSLP++HPRS+S    YG TD E  E ED G RSDR  SIEVRRTD  HFAV   SP+Q +T   +   +G  R QGF FG   R
Sbjct:   80 ERQHTIDLQRSSRGLSNADEMA-----LVQQRELRMQRNLSLPERHPRSSSSSVEYGVTDHE--EDEDDGERSDRSDSIEVRRTDTHHFAVCGISPDQTTTGGGECTPQGMPRRQGFKFGHGRR 196

[Close]

BLAST of mRNA_P-littoralis_Contig763.18.1 vs. uniprot
Match: A0A6H5KWG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG8_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.110e-22
Identity = 69/127 (54.33%), Postives = 83/127 (65.35%), Query Frame = 0

Query:   73 EERLPTIDLQRS-RGFSNADMDADMVSILYQQQQLRVERQLSLPDQHPRSNSQ-ESYGQTDQEDAESEDMGSRSDRHSSIEVRRTDVAHFAVDSTSPEQWSTNPRD--GKGYRRLQGFAFGQNLRRL 195
            EER  TIDLQRS RG SNAD  A     L QQ++LR++R LSLP++HPRS+S  + YG TD E  E +D G RSDR  SIEVRRTD  HFAV   +P+Q +    +   +G  R QGF FG N RRL
Sbjct:   69 EERQHTIDLQRSSRGLSNADEMA-----LVQQRELRIQRNLSLPERHPRSSSSSQEYGVTDHE--EDDDDGERSDRSDSIEVRRTDAHHFAVCGINPDQAARGGGECTPQGMPRRQGFKFG-NGRRL 187

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig763.18.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig763.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FVV3_ECTSI	1.420e-22	54.84	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KWG8_9PHAE	3.110e-22	54.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig763	contig	P-littoralis_Contig763:64146..71106 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig763.18.1	mRNA_P-littoralis_Contig763.18.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig763 62446..71338 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig763.18.1 ID=prot_P-littoralis_Contig763.18.1|Name=mRNA_P-littoralis_Contig763.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MKLFGRKGRLQAEDGGFGAAFDASNNISSSEPQGQERQDQHQHQHQHEQH
QQQHQHQQEDEDEDSDNGGGAREERLPTIDLQRSRGFSNADMDADMVSIL
YQQQQLRVERQLSLPDQHPRSNSQESYGQTDQEDAESEDMGSRSDRHSSI
EVRRTDVAHFAVDSTSPEQWSTNPRDGKGYRRLQGFAFGQNLRRL*