prot_P-littoralis_Contig763.12.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig763.12.3
Unique Name	prot_P-littoralis_Contig763.12.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	489

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig763.12.3 vs. uniprot
Match: A0A6H5KY04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY04_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 2.270e-100
Identity = 212/409 (51.83%), Postives = 244/409 (59.66%), Query Frame = 0

Query:   92 GGRGTS----EVDDLARRIRGRLVDLFHLGVMGGCSALVEACLQATLSAIWGGEGPELLAWGGLVDCASFNEVMLSELFRPAWRVGAEVLRVLLRNAALFRMIIXXXXXXXXXXXXXXXXPAAPSGVMSGRVAGADVGDRDRGGGGRDRASAAKSAVTEDTALPXXXXXXXXXXXXXXXXXXXXXXXKGEES--VDEGDGDFGEPLVRRLCLDAVAVGEDTPFGDDVGLRLSVVRLVFSACQTYGTEAAQHLFADDGLRTEENKGARGXXXXXXXXXXXXXXXXXARGPVKKEEAELPVFGWDGDDELIPALVNFVRVELEEWEWRKYSEGNPM------EAERVSLLKEVFQLLWALSVHTPLPFRDMAQGAGVFNTMVSVVSRFYNSIEMEEFQVFKEAMMLMERMN 488
            GG G S    E +DL RRI+ RLV  FH GV  GC ALVE CLQATL+AIW  +G ELLAWG LVD  SFN VM S+LFRPAW+VGAEVL VLLRNA +FR I                 PA      +    G DVGDR         A+A KSA T+ TA+P                          E    DEG GD+G+ L+RRLCLDAVAVG+  PFG DVGLRLSV++L+FSACQ YG EAA+ LF  DG R     G R                  + G       E          ELIPALV+FVR+ELE+WE RKYSE +P       + +RV LLK+ FQLLWAL++HTPLP RDMAQGAG+FNTMVSVVSRFYNS EMEEFQV KEAMMLME+M+
Sbjct: 1011 GGSGESAAGEEAEDLGRRIQDRLVAFFHHGVACGCPALVEVCLQATLTAIWDRQGSELLAWGDLVDSNSFNHVMTSDLFRPAWQVGAEVLSVLLRNADIFREIAVDKELEQQRDGEDHASPARRPRPSTEMPFG-DVGDRSC-------AAAEKSAKTDATAIPTPRSGATVLEGGNFRGGAGEAVAGDREGDLEDEGFGDYGDSLLRRLCLDAVAVGKYAPFGKDVGLRLSVIKLMFSACQAYGEEAARSLFGADGYR-----GGRS-----------------SLGXXXXXXXE--------GRELIPALVDFVRLELEDWERRKYSEADPKGIDPHEDRDRVELLKQAFQLLWALAMHTPLPLRDMAQGAGMFNTMVSVVSRFYNSAEMEEFQVHKEAMMLMEKMS 1381

[Close]

BLAST of mRNA_P-littoralis_Contig763.12.3 vs. uniprot
Match: D7FVV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV4_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 2.700e-100
Identity = 207/411 (50.36%), Postives = 237/411 (57.66%), Query Frame = 0

Query:   92 GGRGTSEV----DDLARRIRGRLVDLFHLGVMGGCSALVEACLQATLSAIWGGEGPELLAWGGLVDCASFNEVMLSELFRPAWRVGAEVLRVLLRNAALFRMIIXXXXXXXXXXXXXXXXPAAPSGVMSGRVAGADVGDRDRGGGGRDRASAAKSAVTEDTALPXXXXXXXXXXXXXXXXXXXXXXXKGEESVDEGDGD--FGEPLVRRLCLDAVAVGEDTPFGDDVGLRLSVVRLVFSACQTYGTEAAQHLFADDGLRTEENKGARGXXXXXXXXXXXXXXXXXARGPVKKEEAELPVFGWDGDD--ELIPALVNFVRVELEEWEWRKYSEGNPM------EAERVSLLKEVFQLLWALSVHTPLPFRDMAQGAGVFNTMVSVVSRFYNSIEMEEFQVFKEAMMLMERMN 488
            GG G  E     +DL RRI+ RLV  FH GV   C ALVE CLQATLSAIW  +GPELLAWG LVD  SFN VM S+LFRPAW++GAEVL VLLRNA +FR I                   A     +  +  ADVGDR  G       +A KSA T+ TA+P                     XX              FG+ L+RRLCLDAVAVGE  PFG DVGLRLSV++LVFSACQ YG EAA+ LF  DG R  +                       A G                 +  ELIPALV+FVR+ELE+WE R+YSE  P       + +RV LLK+ FQLLWAL++HTPLP RDMAQGAG+FNTMVSVVSRFYNS EMEEFQV KEAMMLME+MN
Sbjct:  517 GGSGEPEAGEAAEDLGRRIQDRLVAFFHHGVACDCPALVEVCLQATLSAIWDRQGPELLAWGDLVDSNSFNHVMSSDLFRPAWQIGAEVLSVLLRNADIFREIAVDNELEQQREEEEDQTSPARQPRSTTEMPSADVGDRGCG-------AAEKSAKTDATAIPTPRSGATVLDGGNFGGGAGEAXXXXXXXXXXXXXXXXFGDSLLRRLCLDAVAVGEYAPFGKDVGLRLSVIKLVFSACQAYGEEAARSLFGADGFRVGDE----------------------AEGXXXXXXXXXXXXXXXXXEVRELIPALVDFVRLELEDWERRRYSEAAPKGSDPHEDRDRVELLKQTFQLLWALAMHTPLPLRDMAQGAGMFNTMVSVVSRFYNSAEMEEFQVHKEAMMLMEKMN 898

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig763.12.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig763.12.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KY04_9PHAE	2.270e-100	51.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FVV4_ECTSI	2.700e-100	50.36	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..287

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig763	contig	P-littoralis_Contig763:52842..59519 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig763.12.3	mRNA_P-littoralis_Contig763.12.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig763 52502..60416 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig763.12.3 ID=prot_P-littoralis_Contig763.12.3|Name=mRNA_P-littoralis_Contig763.12.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=489bp
MHMGIDVGVPLASQSVVAPSGCCRYGRRRRRRRRSRTATMMVPPTEGGDE
RGGEIRRHEQKEVTGWSEETGGGYAEGGDDGDDNDEVVFWAGGRGTSEVD
DLARRIRGRLVDLFHLGVMGGCSALVEACLQATLSAIWGGEGPELLAWGG
LVDCASFNEVMLSELFRPAWRVGAEVLRVLLRNAALFRMIIAAQQQQQQQ
QQQQQQEPAAPSGVMSGRVAGADVGDRDRGGGGRDRASAAKSAVTEDTAL
PTPPPPPPLPPPSRSGAKEGGGGGKGEESVDEGDGDFGEPLVRRLCLDAV
AVGEDTPFGDDVGLRLSVVRLVFSACQTYGTEAAQHLFADDGLRTEENKG
ARGGGGGAGGGAQPPPSAGGARGPVKKEEAELPVFGWDGDDELIPALVNF
VRVELEEWEWRKYSEGNPMEAERVSLLKEVFQLLWALSVHTPLPFRDMAQ
GAGVFNTMVSVVSRFYNSIEMEEFQVFKEAMMLMERMN*