prot_P-littoralis_Contig763.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig763.8.1
Unique Nameprot_P-littoralis_Contig763.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length106
Homology
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: D7FVV5_ECTSI (Transcription elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 5.430e-60
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNAMGGAAEEAKNDEQFIDNQEIAEG 105
            MGRRKKSTKKIV+KKNTTLDKVFKCPFCNHDKVVECTM++KE TARLLCRMC+V +EM I+YLTEPIDVYTDWIDECEA NA+  AAEE K+DEQFID+QEIAEG
Sbjct:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG 105          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A329SPD8_9STRA (Transcription elongation factor 1 homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SPD8_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.980e-32
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC MDR+ N   L CR+C   F+  IHYL+ PIDVYTDWIDECEA NA
Sbjct:   46 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 127          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: M4B5A6_HYAAE (Transcription elongation factor 1 homolog n=16 Tax=Oomycota TaxID=4762 RepID=M4B5A6_HYAAE)

HSP 1 Score: 115 bits (289), Expect = 8.700e-32
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRKK+TKK+  +K   +  VFKCPFC+HD+ VEC MDR+ N   L CR+C   F+  IHYL+ PIDVYTDWIDECEA NA
Sbjct:    1 MGRRKKATKKVQTRKKQAVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 82          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A6A3LNQ0_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNQ0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.350e-31
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC MDR+ N   L CR+C   F+  IHYL+ PIDVYTDWIDECEA NA
Sbjct:   52 MGRRKKSTKKISTRKKQIVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 133          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A024U4B4_9STRA (Transcription elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.360e-30
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C MDR  N   L CR+C   ++  I+YL+EPIDVYTDWIDECEA ++
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A485LI04_9STRA (Transcription elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA)

HSP 1 Score: 110 bits (276), Expect = 8.780e-30
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEA 79
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C MDR  N   L CR+C   ++  I+YL+EPIDVYTDWIDECEA
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEA 79          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: H3HB17_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3HB17_PHYRM)

HSP 1 Score: 117 bits (293), Expect = 2.970e-29
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC MDR+ N   L CR+C   F+  IHYL+ PIDVYTDWIDECEA NA
Sbjct:  310 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 391          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A835ZFT2_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.980e-28
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNA 82
            MGRRK STKKI  KK  TLD  FKCPFC HDKVV+CTM+ K+N   L CR C+ K+   I+YL+EPID++T+WID  EA +A
Sbjct:    1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: UPI001CC465E2 (transcription elongation factor 1 homolog n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC465E2)

HSP 1 Score: 100 bits (248), Expect = 2.520e-25
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNAMGG 85
            MG+RK S K    KK   L+ VF CPFCNH+K V CT+DRKE    L C +C+ K+   I+ L+EPID+Y++WIDECE  N M G
Sbjct:    1 MGKRKSSAKPAPKKKMEKLESVFNCPFCNHEKSVNCTIDRKEMIGELTCCICQEKYSTAINNLSEPIDIYSEWIDECEKVNDMDG 85          
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Match: A0A7S2EM35_TRICV (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EM35_TRICV)

HSP 1 Score: 96.7 bits (239), Expect = 6.380e-24
Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCRMCEVKFEMGIHYLTEPIDVYTDWIDECEACNAMGGAAEEA 90
            MGRR K    +  KK  TL K FKCPFC +D VVEC MD +  T  L CR+C   ++M IH+L EP+DV+++W+D+CEA    GG   +A
Sbjct:    1 MGRRAKKAP-VQTKKRATLAKRFKCPFCANDNVVECKMDHRAGTGSLACRLCGASYQMPIHHLHEPVDVFSEWLDDCEAAERGGGTVGDA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig763.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV5_ECTSI5.430e-6084.76Transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A329SPD8_9STRA7.980e-3264.63Transcription elongation factor 1 homolog n=2 Tax=... [more]
M4B5A6_HYAAE8.700e-3262.20Transcription elongation factor 1 homolog n=16 Tax... [more]
A0A6A3LNQ0_9STRA1.350e-3164.63Transcription elongation factor 1 homolog n=1 Tax=... [more]
A0A024U4B4_9STRA4.360e-3059.76Transcription elongation factor 1 homolog n=3 Tax=... [more]
A0A485LI04_9STRA8.780e-3062.03Transcription elongation factor 1 homolog n=6 Tax=... [more]
H3HB17_PHYRM2.970e-2964.63Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A835ZFT2_9STRA7.980e-2860.98Transcription elongation factor 1 homolog n=1 Tax=... [more]
UPI001CC465E22.520e-2552.94transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A7S2EM35_TRICV6.380e-2448.89Transcription elongation factor 1 homolog (Fragmen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038567Transcription elongation factor 1 superfamilyGENE3D2.20.25.190coord: 15..82
e-value: 7.2E-28
score: 98.5
IPR007808Transcription elongation factor 1PFAMPF05129Elf1coord: 2..78
e-value: 4.2E-29
score: 100.4
IPR007808Transcription elongation factor 1PANTHERPTHR20934UNCHARACTERIZEDcoord: 1..82
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig763contigP-littoralis_Contig763:40233..43429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig763.8.1mRNA_P-littoralis_Contig763.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig763 39861..44867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig763.8.1 ID=prot_P-littoralis_Contig763.8.1|Name=mRNA_P-littoralis_Contig763.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp
MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMDRKENTARLLCR
MCEVKFEMGIHYLTEPIDVYTDWIDECEACNAMGGAAEEAKNDEQFIDNQ
EIAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038567T_Elf1_sf
IPR007808Elf1