prot_P-littoralis_Contig760.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig760.30.1
Unique Nameprot_P-littoralis_Contig760.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length285
Homology
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 4.110e-21
Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   15 VRNNSRRWTSEEHQAFLSGLRLYGRN-WEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDEPYVSQNEAAAGQAGAA 92
            +R N  RWTSEEH AFL G+R + RN W  IA+++PTRTV QIRTH+QKY+ K+++G+ FPDEPY SQ+EAAAG++ A+
Sbjct:    3 IRRNKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSAS 81          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 9.400e-19
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   15 VRNNSRRWTSEEHQAFLSGLRLYGRN-WEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDEPYVSQNEAAAGQAGAA 92
            +R N  RWT EEH  FL G+ L+ R+  EA+ASM+PTRT+ Q+RTH+QKYF K+++G+ FP+EPY SQ + AAG+AG A
Sbjct:    3 IRRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYDRAAGRAGVA 81          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.890e-18
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   15 VRNNSRRWTSEEHQAFLSGLRLYGRN-WEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDEPYVSQNEAAAGQAGAA 92
            +R N  RWT EEH  FL G+ L+ R+  EA+ASM+PTRT+ Q+RTH+QKYF K+++G+ FP EPY SQ + AAG+AG A
Sbjct:    3 IRRNKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQYDRAAGRAGVA 81          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 2.160e-17
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    9 TLQLDMVRNNSRRWTSEEHQAFLSGLRLYGRN-WEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDE 76
            T Q   +R N  RWTSEEH AFL G+R + RN W  IA+++PTRTV QIRTH+QKY+ K+++G+ FPDE
Sbjct:    2 TAQKFRIRRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDE 70          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 4.330e-15
Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 0
Query:   18 NSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDEPYVS 80
            N+ RWT EEH AFL GL L+G+NW+ IA +V TR+  Q+RTH QKYF K+++G+ FP+EPY S
Sbjct:    6 NNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYES 68          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: K3WLW5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLW5_GLOUD)

HSP 1 Score: 77.4 bits (189), Expect = 4.020e-14
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   18 NSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEFPDEP-YVSQNEAAAGQ 88
            N  RWT +EHQ+FL+GLRLYGR W+ +AS + TRT  QIR+H+QKYF K+ +  E       +SQ+E AA Q
Sbjct:   22 NGGRWTEQEHQSFLAGLRLYGREWKKVASKIKTRTSAQIRSHAQKYFAKLARDDEIRKHAGSLSQHEGAASQ 93          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A7S1C6P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.390e-14
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 MTYTT-SPSTLQLDMVRNNSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKI--EQG 70
            M Y T +P+T   +    N+ RWT +EH+ F+ GL LYGR W+ +ASM+P+RTV QIRTH+QKYF K+  EQG
Sbjct:    1 MNYATHAPTTRTTEKGTVNTGRWTRDEHERFVKGLELYGREWKKVASMIPSRTVVQIRTHAQKYFQKLAKEQG 73          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A1E7FKC4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKC4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.510e-12
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   21 RWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKIEQGKE 72
            RWT EEH AFLSGL++YG+ W+ +A+ V TRTV Q RTH+QKYF K+ +  E
Sbjct:    1 RWTKEEHDAFLSGLKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLSKATE 52          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: M4BQ55_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQ55_HYAAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.940e-12
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:   13 DMVRNNSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKIEQGKE 72
            D    N  RWT +EHQ FL+GLRLYGR W+ +A+ + TRT  QIR+H+QKYF KI + KE
Sbjct:   81 DHAGKNGGRWTEQEHQNFLAGLRLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKIARDKE 140          
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Match: A0A0W8CDT9_PHYNI (LHY protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT9_PHYNI)

HSP 1 Score: 74.7 bits (182), Expect = 1.270e-11
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    4 TTSPSTLQLDMVRNNSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPTRTVRQIRTHSQKYFVKIEQGKEF 73
            T+S +T Q      N  RWT +EHQ+FL+GLRLYGR W+ +A+ + TRT  QIR+H+QKYF K+ +  E 
Sbjct:   83 TSSNATHQKGQTGMNGGRWTEQEHQSFLAGLRLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKLARDDEM 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig760.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L149_9PHAE4.110e-2160.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXQ4_ECTSI9.400e-1956.96HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KVV5_9PHAE2.890e-1856.96HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7FXJ4_ECTSI2.160e-1757.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC35_9PHAE4.330e-1558.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3WLW5_GLOUD4.020e-1452.78Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S1C6P3_9STRA8.390e-1453.42Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1E7FKC4_9STRA1.510e-1259.62Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
M4BQ55_HYAAE5.940e-1256.67Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0W8CDT9_PHYNI1.270e-1150.00LHY protein n=2 Tax=Phytophthora TaxID=4783 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 18..66
e-value: 1.1E-11
score: 54.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 14..64
score: 7.410119
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 21..59
e-value: 1.15603E-10
score: 53.7334
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 18..66
e-value: 2.2E-11
score: 41.9
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 21..63
e-value: 9.3E-13
score: 48.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 20..68
score: 13.715557
NoneNo IPR availableGENE3D1.10.10.60coord: 21..67
e-value: 1.5E-16
score: 62.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..125
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 6..158
NoneNo IPR availablePANTHERPTHR12802:SF20MYB-LIKE PROTEIN Gcoord: 6..158
IPR017884SANT domainPROSITEPS51293SANTcoord: 19..68
score: 12.923634
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 15..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig760contigP-littoralis_Contig760:83509..96638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig760.30.1mRNA_P-littoralis_Contig760.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig760 80061..99851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig760.30.1 ID=prot_P-littoralis_Contig760.30.1|Name=mRNA_P-littoralis_Contig760.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp
MTYTTSPSTLQLDMVRNNSRRWTSEEHQAFLSGLRLYGRNWEAIASMVPT
RTVRQIRTHSQKYFVKIEQGKEFPDEPYVSQNEAAAGQAGAAAGAYLYDS
QQQQQPQPQLTPQQNEQLQAGAGTSVAGVNEWMQATATLPPPHWGGGDGG
GGGGSGGGGVGAGRRYPGLLIGRERQVVEMEAATAGPLEFGNYAGTGASF
MMLPPVAPSGHGGRFDSRSISGSISRSPCSSFGFATGYPMCEVGQSCCGF
TRVASPVAVSGASARFGGELVAPTQPVAPSIMMP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR017884SANT_dom
IPR009057Homeobox-like_sf