mRNA_P-littoralis_Contig76.197.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI) HSP 1 Score: 268 bits (686), Expect = 7.760e-90 Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA 442
MFLQLFVVNKSGGLIYNQNLSSAAPRL SNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLG VL EIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA
Sbjct: 1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA 138
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.090e-65 Identity = 102/135 (75.56%), Postives = 119/135 (88.15%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNA 433
MFLQLF++NKSG LI++Q+LS AAPRL+SND LRLGSTFHSLHAIAAQVAP+ SSGIEKLET T++L+ QTLTG KFVITA+ TP+L VL IYELYTDYVLKNPFYELEMPIRCELFT +LE+L+ER++ A
Sbjct: 1 MFLQLFIINKSGSLIFHQDLSPAAPRLSSNDSLRLGSTFHSLHAIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLKNPFYELEMPIRCELFTQHLEKLVERYNAA 135
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC) HSP 1 Score: 200 bits (508), Expect = 7.600e-63 Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHS 427
MFL LFV+++SGGLIYN++LSS+APRLT N+WL LGSTFH LH+IAAQVAP+ SSGIEKLE D KLQ FQ+ TGVKFV+TAE GTPDL VLH IYELY DYVLKNPFYE++MPIRC+LF +E LIER+S
Sbjct: 4 MFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNS 136
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.870e-61 Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGG 439
MFL LF++++SGGLI+NQ+LS APRL +NDWLRLGSTFH HAIA+Q+APV SSGIEKLETD+F L+ FQ TG+KFVITAEAGT DL VL +Y+ YTDYVLKNPFYELEMPIRCELFT + +I+ H + G
Sbjct: 1 MFLHLFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQSHGSQTG 137
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD) HSP 1 Score: 183 bits (464), Expect = 3.810e-56 Identity = 88/131 (67.18%), Postives = 105/131 (80.15%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 421
M L+++NKSGGL+Y Q+LSSAAP+L+SND LRLGSTFHS+HAIA +PV S GIE LETDTF+LQ FQT TG+KF +TA GTPDL AVL +YELY DYVLKNPFYELEMPIRC LF L+ +++
Sbjct: 1 MLHSLYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGLKTFVDK 131
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN) HSP 1 Score: 182 bits (462), Expect = 7.660e-56 Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 421
M L+++NKSGGLIY +LSSAAPRL+SND LRLGSTFHS+HAIA APV S GIE LETDTF+LQ FQT TG+KF ITA GTPDL L IYELY DYVLKNPFYELEMPIRC LF L+ +++
Sbjct: 1 MLHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDK 131
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.910e-55 Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSN 430
M L+++NKSGGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIAA APV S GI LETDTF+LQ FQTLTG+KF ITA+ GT D+ L IYELY DYVLKNPFYELEMPIRC LF L+ +++ +N
Sbjct: 1 MLHALYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDKFNN 134
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A6G0XR37_9STRA (Trafficking protein particle complex subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR37_9STRA) HSP 1 Score: 172 bits (435), Expect = 7.950e-52 Identity = 88/133 (66.17%), Postives = 105/133 (78.95%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 421
M L L+V+NK+GGLIY Q+LSS AP+L+SND+LRLGSTFHS+HAIAA APV S GI +ETD+F+LQ FQ +TG KF ITA + +L AVL +IYELY DYVLKNPFYELEMPIRC LF L+ L+ER
Sbjct: 1 MLLSLYVINKAGGLIYQQDLSSEAPKLSSNDYLRLGSTFHSMHAIAALAAPVLSKGILSMETDSFRLQCFQAMTGTKFFITALPVLSSAELDAVLLQIYELYADYVLKNPFYELEMPIRCHLFHSNLQLLVER 133
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A7S4A735_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A735_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.060e-51 Identity = 83/136 (61.03%), Postives = 103/136 (75.74%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAG 436
M+LQL ++NKSGGL+YNQ+LS A +L SNDWLR+GSTFHSLH IA + P SSGI LET +F L+ +T+TG+KFV+TAE GT L VL +YELY+DYVLKNPF++LEMPIRC LFT ++ EL E G
Sbjct: 1 MYLQLMIINKSGGLVYNQDLSPQAAQLDSNDWLRIGSTFHSLHEIARSIPPGRSSGIVALETSSFALRCLETITGIKFVLTAERGTQVLEPVLRMVYELYSDYVLKNPFHDLEMPIRCRLFTEHVTELFESFHTTG 136
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A397BNG8_9STRA (Trafficking protein particle complex subunit n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BNG8_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.200e-51 Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 2
Query: 29 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 421
M L LFV+NK+GG++Y Q+LS+ AP+++SND LRLGSTFHS+HAIAA APV S GI ++TD+F+LQ FQTLTG KF ITA + DL AVL +IYELY DYVLKNPFYELEMPIRC LF L+ L+++
Sbjct: 9 MLLSLFVINKAGGVVYQQDLSAEAPKISSNDRLRLGSTFHSIHAIAALAAPVASKGIVSMDTDSFRLQCFQTLTGTKFFITALPNISSGDLEAVLRQIYELYADYVLKNPFYELEMPIRCHLFYTNLQLLVDK 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig76.197.2 >prot_P-littoralis_Contig76.197.2 ID=prot_P-littoralis_Contig76.197.2|Name=mRNA_P-littoralis_Contig76.197.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAback to top mRNA from alignment at P-littoralis_Contig76:620908..622946+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig76.197.2 ID=mRNA_P-littoralis_Contig76.197.2|Name=mRNA_P-littoralis_Contig76.197.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2039bp|location=Sequence derived from alignment at P-littoralis_Contig76:620908..622946+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig76:620908..622946+ >mRNA_P-littoralis_Contig76.197.2 ID=mRNA_P-littoralis_Contig76.197.2|Name=mRNA_P-littoralis_Contig76.197.2|organism=Pylaiella littoralis U1_48|type=CDS|length=444bp|location=Sequence derived from alignment at P-littoralis_Contig76:620908..622946+ (Pylaiella littoralis U1_48)back to top |