prot_P-littoralis_Contig76.197.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.197.2
Unique Nameprot_P-littoralis_Contig76.197.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length148
Homology
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.390e-90
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA 138
            MFLQLFVVNKSGGLIYNQNLSSAAPRL SNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLG VL EIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA
Sbjct:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGA 138          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA)

HSP 1 Score: 206 bits (524), Expect = 3.990e-66
Identity = 102/135 (75.56%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNA 135
            MFLQLF++NKSG LI++Q+LS AAPRL+SND LRLGSTFHSLHAIAAQVAP+ SSGIEKLET T++L+  QTLTG KFVITA+  TP+L  VL  IYELYTDYVLKNPFYELEMPIRCELFT +LE+L+ER++ A
Sbjct:    1 MFLQLFIINKSGSLIFHQDLSPAAPRLSSNDSLRLGSTFHSLHAIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLKNPFYELEMPIRCELFTQHLEKLVERYNAA 135          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC)

HSP 1 Score: 200 bits (508), Expect = 1.460e-63
Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHS 133
            MFL LFV+++SGGLIYN++LSS+APRLT N+WL LGSTFH LH+IAAQVAP+ SSGIEKLE D  KLQ FQ+ TGVKFV+TAE GTPDL  VLH IYELY DYVLKNPFYE++MPIRC+LF   +E LIER+S
Sbjct:    4 MFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNS 136          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA)

HSP 1 Score: 196 bits (498), Expect = 5.540e-62
Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGG 137
            MFL LF++++SGGLI+NQ+LS  APRL +NDWLRLGSTFH  HAIA+Q+APV SSGIEKLETD+F L+ FQ  TG+KFVITAEAGT DL  VL  +Y+ YTDYVLKNPFYELEMPIRCELFT  +  +I+ H +  G
Sbjct:    1 MFLHLFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQSHGSQTG 137          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD)

HSP 1 Score: 183 bits (464), Expect = 7.510e-57
Identity = 88/131 (67.18%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 131
            M   L+++NKSGGL+Y Q+LSSAAP+L+SND LRLGSTFHS+HAIA   +PV S GIE LETDTF+LQ FQT TG+KF +TA  GTPDL AVL  +YELY DYVLKNPFYELEMPIRC LF   L+  +++
Sbjct:    1 MLHSLYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGLKTFVDK 131          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN)

HSP 1 Score: 182 bits (462), Expect = 1.510e-56
Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 131
            M   L+++NKSGGLIY  +LSSAAPRL+SND LRLGSTFHS+HAIA   APV S GIE LETDTF+LQ FQT TG+KF ITA  GTPDL   L  IYELY DYVLKNPFYELEMPIRC LF   L+  +++
Sbjct:    1 MLHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDK 131          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.770e-56
Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSN 134
            M   L+++NKSGGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIAA  APV S GI  LETDTF+LQ FQTLTG+KF ITA+ GT D+   L  IYELY DYVLKNPFYELEMPIRC LF   L+  +++ +N
Sbjct:    1 MLHALYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDKFNN 134          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A6G0XR37_9STRA (Trafficking protein particle complex subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR37_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.600e-52
Identity = 88/133 (66.17%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 131
            M L L+V+NK+GGLIY Q+LSS AP+L+SND+LRLGSTFHS+HAIAA  APV S GI  +ETD+F+LQ FQ +TG KF ITA     + +L AVL +IYELY DYVLKNPFYELEMPIRC LF   L+ L+ER
Sbjct:    1 MLLSLYVINKAGGLIYQQDLSSEAPKLSSNDYLRLGSTFHSMHAIAALAAPVLSKGILSMETDSFRLQCFQAMTGTKFFITALPVLSSAELDAVLLQIYELYADYVLKNPFYELEMPIRCHLFHSNLQLLVER 133          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A7S4A735_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A735_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.130e-52
Identity = 83/136 (61.03%), Postives = 103/136 (75.74%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAG 136
            M+LQL ++NKSGGL+YNQ+LS  A +L SNDWLR+GSTFHSLH IA  + P  SSGI  LET +F L+  +T+TG+KFV+TAE GT  L  VL  +YELY+DYVLKNPF++LEMPIRC LFT ++ EL E     G
Sbjct:    1 MYLQLMIINKSGGLVYNQDLSPQAAQLDSNDWLRIGSTFHSLHEIARSIPPGRSSGIVALETSSFALRCLETITGIKFVLTAERGTQVLEPVLRMVYELYSDYVLKNPFHDLEMPIRCRLFTEHVTELFESFHTTG 136          
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Match: A0A397BNG8_9STRA (Trafficking protein particle complex subunit n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BNG8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 4.430e-52
Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 131
            M L LFV+NK+GG++Y Q+LS+ AP+++SND LRLGSTFHS+HAIAA  APV S GI  ++TD+F+LQ FQTLTG KF ITA     + DL AVL +IYELY DYVLKNPFYELEMPIRC LF   L+ L+++
Sbjct:    9 MLLSLFVINKAGGVVYQQDLSAEAPKISSNDRLRLGSTFHSIHAIAALAAPVASKGIVSMDTDSFRLQCFQTLTGTKFFITALPNISSGDLEAVLRQIYELYADYVLKNPFYELEMPIRCHLFYTNLQLLVDK 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.197.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ99_ECTSI1.390e-9097.83Trafficking protein particle complex subunit n=2 T... [more]
A0A835ZDL6_9STRA3.990e-6675.56Trafficking protein particle complex subunit n=1 T... [more]
K8Z5G7_NANGC1.460e-6373.68Trafficking protein particle complex subunit (Frag... [more]
A0A7S2RJT7_9STRA5.540e-6268.61Trafficking protein particle complex subunit n=1 T... [more]
K3WRL1_GLOUD7.510e-5767.18Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CAE8_PYTIN1.510e-5668.70Trafficking protein particle complex subunit n=2 T... [more]
F0WDB3_9STRA5.770e-5666.42Trafficking protein particle complex subunit n=3 T... [more]
A0A6G0XR37_9STRA1.600e-5266.17Trafficking protein particle complex subunit n=1 T... [more]
A0A7S4A735_9STRA2.130e-5261.03Trafficking protein particle complex subunit n=1 T... [more]
A0A397BNG8_9STRA4.430e-5263.91Trafficking protein particle complex subunit n=6 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 2..132
e-value: 5.5E-64
score: 228.6
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 4..131
e-value: 3.3E-45
score: 153.5
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 3..133
NoneNo IPR availableGENE3D3.30.450.70coord: 1..132
e-value: 7.4E-45
score: 154.7
NoneNo IPR availablePANTHERPTHR23249:SF15TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4coord: 3..133
NoneNo IPR availableCDDcd14856TRAPPC4_synbindincoord: 3..128
e-value: 7.05223E-76
score: 219.697
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:620936..622842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.197.2mRNA_P-littoralis_Contig76.197.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 620908..622946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.197.2 ID=prot_P-littoralis_Contig76.197.2|Name=mRNA_P-littoralis_Contig76.197.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp
MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVA
PVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELY
TDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAAGNGAGGKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom_sf