prot_P-littoralis_Contig76.178.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.178.3
Unique Nameprot_P-littoralis_Contig76.178.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length542
Homology
BLAST of mRNA_P-littoralis_Contig76.178.3 vs. uniprot
Match: D7FQ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ91_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.750e-108
Identity = 258/564 (45.74%), Postives = 297/564 (52.66%), Query Frame = 0
Query:    1 MLAEADVERACRAAARAVAPEPKRRRRPRATPVD-DEGGWSVAGPC-VPTFWPRFLDIWLVAARVRCAVLLDSRRAPRGSPPLASVLFELQHQXXXXXXXXQHCNGCPRCSSGCD-----VACLGLLFLEESCFLVNRVMLLQRLGDFHSVESTIAAGKVENVGRAQDFTNTECSCSGRCGVPRDPSEGQPVEVTAVGPSSKLEGYPAPPAGKSSAAAQQQRQRQGPRRDFALVDVRKSLASPCNHSDFLVPKLHAALRSAFGDVAVAXXXXXXXXDSCGRGDLTSSFIADSSLPPPPGTRSSSHRVPPRATEATAKNNAEEMSSGDGGREFCRAPARERQG-ARWLRDWGMMEMSLDCESLGKILGDVGLPGLAGWLLEYPVIYCCPSLVETTKDYGDRGEDGALRGAATGTETEHEVGNCLPVVPLTVFSLIFDTDKDATGCCSPPPAPIAFTSSHSTGATASHAFSFSVPETMCGTTEVEKGEQ----GGL-----EETN------LQSLVDIFLGRLESRIARHRRRHGSGDCCCCGLHQQSVYGLTVTKRTETLDRVAL 541
            ++ EAD ERACRAAAR VAP+ KRR RPRA  VD ++G WSVAG     TFWPRF DI L AA VRCAVLLDSRRAPR SPPLA VL  LQH         +HC     C S CD     VACLGLL LE S FLVNRVML++RL +  S E TIAA  V+   R      T+C          D   G   E                PA   +A+A Q   R   RRD AL+DV  +LA P + SD L P+L+AAL  AFG   VA        +   RG         S  PPP GT   S      A E +AK+N E+   G  G    R P  E +G ARWLRDW M E+ LDCESL K LGDVGL G+AGWLLEYP IYCC SL            DG   G+  G E EH  GNCL  VPLTV+SL  D      G  S P   +   S+  TGA    AFSFSVPE MCG TE E+ E     GG      EE +      L  LVD F+  ++ R+AR RR   +G+         S   L V+KR  TLD+VAL
Sbjct:    2 LIEEADFERACRAAARGVAPQHKRRVRPRAAAVDSNDGDWSVAGGSRSQTFWPRFGDICLAAAGVRCAVLLDSRRAPRRSPPLADVLLALQHDQQERQQQKEHC-ATRDCHSDCDCNSGGVACLGLLVLEGSSFLVNRVMLVRRLNELFSGE-TIAAEPVDERFRRSATCATDC----------DKKSGYGTEAVR-------------PAVDGAASAHQ---RHFDRRDLALLDVNMALAVPSDRSDVLAPRLYAALLWAFGGATVAATANSVE-EGRARGP--------SPTPPPRGTSRES-----TAMETSAKSNREDRFCGGDG--VHRVPPSELEGGARWLRDWSMKELVLDCESLVKTLGDVGLSGMAGWLLEYPAIYCCSSL-----------NDGTTNGS-DGKEMEHARGNCLAAVPLTVYSLAVDLGDKGRGSSSRPQPSLDERSASVTGAWF-EAFSFSVPEAMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRRSGVNGN--------DSFLSLNVSKRRATLDQVAL 500          
BLAST of mRNA_P-littoralis_Contig76.178.3 vs. uniprot
Match: A0A6H5LL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL79_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.660e-102
Identity = 251/564 (44.50%), Postives = 288/564 (51.06%), Query Frame = 0
Query:    1 MLAEADVERACRAAARAVAPEPKRRRRPRATPVD-DEGGWSVAGPC-VPTFWPRFLDIWLVAARVRCAVLLDSRRAPRGSPPLASVLFELQHQXXXXXXXXQHCNGCPRCSSGCD-----VACLGLLFLEESCFLVNRVMLLQRLGDFHSVESTIAAGKVENVGRAQDFTNTECSCSGRCGVPRDPSEGQPVEVTAVGPSSKLEGYPAPPAGKSSAAAQQQRQRQGPRRDFALVDVRKSLASPCNHSDFLVPKLHAALRSAFGDVAVAXXXXXXXXDSCGRGDLTSSFIADSSLPPPPGTRSSSHRVPPRATEATAKNNAEE-MSSGDGGREFCRAPARERQGARWLRDWGMMEMSLDCESLGKILGDVGLPGLAGWLLEYPVIYCCPSLVETTKDYGDRGEDGALRGAATGTETEHEVGNCLPVVPLTVFSLIFDTDKDATGCCSPPPAPIAFTSSHSTGATASHAFSFSVPETMCGTTEVEKGEQ----GGL-----EETN------LQSLVDIFLGRLESRIARHRRRHGSGDCCCCGLHQQSVYGLTVTKRTETLDRVAL 541
            ++ EAD ERACRAA R VAP+ K R RPRA  VD ++G WSVAG     TFWPRF D+ LVAA VRCAVLLDSRRAPRG PPLA VL  +QH         + C     C S CD     VACLGLL LE S FLVNRVML+ RL +  S E TIAA + + + R         +C+  CG                    K  GY A     +   A    QR+   RD  L+DV K+LA P + SD L P+L AAL  AFG   VA            R   T         PPP GT   S      A E  AK+N E+    GDG       P+    GARWLRD  M E+ LDCESL K LGDVGL GLAGWLLEYPVIYCC SL + T +  D            G E EH  GNCL  VPLTV+S   D      GC S     +   S  +TGA    AFSFSVPETMCG TE E+ E     GG      EE +      L  LVD F+  ++ R+AR R   GSGD         S   L V KR  TLD+VAL
Sbjct:    2 LIEEADFERACRAAGRGVAPQHKTRVRPRAAAVDSNDGDWSVAGGSRSQTFWPRFGDVCLVAAGVRCAVLLDSRRAPRGFPPLADVLLAMQHDQQERQQQKERC-ATRDCHSDCDCSSGGVACLGLLVLEGSSFLVNRVMLVHRLNELFSGE-TIAAQQADEMFRRSS------TCATGCG--------------------KKSGYEAEAVRPAVDVAASAHQRRLGWRDSTLLDVNKALAVPSDRSDVLAPRLCAALLWAFGGATVAATANSVEGGRASRPSPT---------PPPRGTSRES-----MAMETPAKSNKEDRFCGGDGVHRVL--PSELEGGARWLRDLSMKELILDCESLVKTLGDVGLSGLAGWLLEYPVIYCCSSLNDGTSNGSD------------GKEMEHARGNCLAAVPLTVYSFAVDLGDKGRGCSSRSQPSLDERSVSATGAWFD-AFSFSVPETMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLR---GSGD-----NGNGSFLSLNVFKRRATLDQVAL 500          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.178.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ91_ECTSI1.750e-10845.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LL79_9PHAE1.660e-10244.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:502997..506160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.178.3mRNA_P-littoralis_Contig76.178.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 502747..507090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.178.3 ID=prot_P-littoralis_Contig76.178.3|Name=mRNA_P-littoralis_Contig76.178.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=542bp
MLAEADVERACRAAARAVAPEPKRRRRPRATPVDDEGGWSVAGPCVPTFW
PRFLDIWLVAARVRCAVLLDSRRAPRGSPPLASVLFELQHQQQQQQQRRQ
HCNGCPRCSSGCDVACLGLLFLEESCFLVNRVMLLQRLGDFHSVESTIAA
GKVENVGRAQDFTNTECSCSGRCGVPRDPSEGQPVEVTAVGPSSKLEGYP
APPAGKSSAAAQQQRQRQGPRRDFALVDVRKSLASPCNHSDFLVPKLHAA
LRSAFGDVAVAAAAAAAAADSCGRGDLTSSFIADSSLPPPPGTRSSSHRV
PPRATEATAKNNAEEMSSGDGGREFCRAPARERQGARWLRDWGMMEMSLD
CESLGKILGDVGLPGLAGWLLEYPVIYCCPSLVETTKDYGDRGEDGALRG
AATGTETEHEVGNCLPVVPLTVFSLIFDTDKDATGCCSPPPAPIAFTSSH
STGATASHAFSFSVPETMCGTTEVEKGEQGGLEETNLQSLVDIFLGRLES
RIARHRRRHGSGDCCCCGLHQQSVYGLTVTKRTETLDRVAL*
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