prot_P-littoralis_Contig76.175.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.175.1
Unique Nameprot_P-littoralis_Contig76.175.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length171
Homology
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BLAST of mRNA_P-littoralis_Contig76.175.1 vs. uniprot
Match: D7FQ88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ88_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.360e-70
Identity = 102/134 (76.12%), Postives = 117/134 (87.31%), Query Frame = 0 
Query:   26 EQAASTTEKDISHGLQLQTMACVGSSKRHNLESETCANVCAKARTTAPRPLAHRSCLAGCRAGVTTAWDTGCTGGRHRDCVRPSTERCEYNCASYRNQLPKPTIFNQCLRSCLEVVDNACLKAKELFVSAELFD 159
            E+AA   +   ++GL+L+T+ACVGS K+H LES+TCA VCAKARTTAPRPLAHRSCLAGCRAGVTTAWDT C GGRHRDCVR STERC+++CASYRNQ PKPTIFNQCLRSCL+VVD  CLK+KE+F SAE FD
Sbjct:  104 EEAAPADDSGNTNGLRLKTLACVGSGKKHELESKTCAKVCAKARTTAPRPLAHRSCLAGCRAGVTTAWDTACVGGRHRDCVRESTERCDFHCASYRNQFPKPTIFNQCLRSCLDVVDTTCLKSKEVFASAETFD 237
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BLAST of mRNA_P-littoralis_Contig76.175.1 vs. uniprot
Match: A0A835ZJF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.190e-14
Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0 
Query:   61 CANVCAKARTTAPRPLAHRSCLAGCRAGVTTAWDTGCTGG-----RHRDCVRPSTERCEYN---CASYRNQLPKPTIFNQCLRSCLEVVDNACLKAKELF 152
            C+N+CA+AR +  +PLAHR+C+ GC  G    WD GC  G       +   + ++ R +     C+++RN  P+P + NQC   C E     C +AK+ F
Sbjct:  153 CSNLCARARFSGSKPLAHRACMVGCEGGSMAGWDAGCGSGPASASETQVVCKQASARLDCRGTVCSAFRNAYPRPAVINQCTSGCAEAAFQGCSRAKDFF 252
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ88_ECTSI4.360e-7076.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZJF1_9STRA6.190e-1435.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:488358..490386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.175.1mRNA_P-littoralis_Contig76.175.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 488063..490593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.175.1 ID=prot_P-littoralis_Contig76.175.1|Name=mRNA_P-littoralis_Contig76.175.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=171bp
MLFLGRRRGGAAVNTDETISTSTTPEQAASTTEKDISHGLQLQTMACVGS
SKRHNLESETCANVCAKARTTAPRPLAHRSCLAGCRAGVTTAWDTGCTGG
RHRDCVRPSTERCEYNCASYRNQLPKPTIFNQCLRSCLEVVDNACLKAKE
LFVSAELFDGEGSKGQTVTG*
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