mRNA_P-littoralis_Contig76.86.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig76.86.4
Unique NamemRNA_P-littoralis_Contig76.86.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A6H5KTN5_9PHAE (DJ-1_PfpI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTN5_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.000e-92
Identity = 169/222 (76.13%), Postives = 184/222 (82.88%), Query Frame = 3 
Query:  294 GLTGSPPALLMSGSTGDGMETA-----------AAADAGGAKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLLF 926
            GLTG    LL+S  TG G   A           AAA++ GAKHVLVPVADGSEEIESVTIIDTLVRAGA+VTVAS+G +VEVTCSRGV+IKADCKIA+CE RDWDAVVCPGGMPGAV LKE+ETLEAILRKQ SEGR+V AICAAPAVVLASHGLL+GK+ATCYPA VF  KIPQLV EKVVVD NLITSQGPATSMAFALQLV +LFG+ KA E+   LLF
Sbjct:   16 GLTGFLCYLLLSPPTGSGRSLAWVPGGPAEAAMAAAESAGAKHVLVPVADGSEEIESVTIIDTLVRAGALVTVASIGPEVEVTCSRGVKIKADCKIAECEARDWDAVVCPGGMPGAVSLKENETLEAILRKQNSEGRIVGAICAAPAVVLASHGLLEGKQATCYPASVFQSKIPQLVSEKVVVDQNLITSQGPATSMAFALQLVGSLFGQEKADEVAKGLLF 237
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A482RT38_9ARCH (DJ-1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RT38_9ARCH)

HSP 1 Score: 223 bits (568), Expect = 4.450e-63
Identity = 109/180 (60.56%), Postives = 137/180 (76.11%), Query Frame = 3 
Query:  384 KHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            KHVLVP+A GSEE+E+VTIIDTLVR GA VTVA VG ++ VTCSRGV+I ADC I+DC  + WD +VCPGGMPGA HL ES TL  IL+K   + + +AAICAAPAVVLA+HG L  K ATCYP   FT KI + V ++VV DG +ITS+GP T++ F+L+LV+ L+G  KA++I   +L
Sbjct:   13 KHVLVPIATGSEEVEAVTIIDTLVRGGAKVTVAGVGSELTVTCSRGVKIVADCLISDCANKSWDMIVCPGGMPGAQHLSESHTLIEILQKHAHDNKFIAAICAAPAVVLAAHGFLTNKTATCYPVSKFTAKIERYVSQRVVQDGQVITSEGPGTALEFSLKLVQVLYGHEKAEQIKNEML 192
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A6S9E808_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E808_HETAK)

HSP 1 Score: 221 bits (564), Expect = 2.210e-62
Identity = 114/182 (62.64%), Postives = 138/182 (75.82%), Query Frame = 3 
Query:  381 AKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLLF 926
            AK VLVP+ADGSEEIESVTIIDTLVRAGA VTVASV  +++VTCSRGV++ AD  IAD     +DA+ CPGG+PGA HL++  TL A+L+ Q   GR+VAA+CAAPAVVL +HGL+ G+ ATCYPA  F   I     + VVV GNL+TSQGP TS+AFAL LV  L+GE KA E+ G +LF
Sbjct:   23 AKKVLVPIADGSEEIESVTIIDTLVRAGAEVTVASVSPELQVTCSRGVKLVADKSIADAAGETYDAIACPGGLPGANHLRDDPTLRALLQAQNEAGRLVAAVCAAPAVVLQTHGLIAGRAATCYPADQFKSAIENYSTDPVVVSGNLVTSQGPGTSLAFALALVAELYGEEKASELKGQMLF 204
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BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A6V1PTF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTF7_HETAK)

HSP 1 Score: 221 bits (564), Expect = 6.060e-62
Identity = 114/182 (62.64%), Postives = 138/182 (75.82%), Query Frame = 3 
Query:  381 AKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLLF 926
            AK VLVP+ADGSEEIESVTIIDTLVRAGA VTVASV  +++VTCSRGV++ AD  IAD     +DA+ CPGG+PGA HL++  TL A+L+ Q   GR+VAA+CAAPAVVL +HGL+ G+ ATCYPA  F   I     + VVV GNL+TSQGP TS+AFAL LV  L+GE KA E+ G +LF
Sbjct:   54 AKKVLVPIADGSEEIESVTIIDTLVRAGAEVTVASVSPELQVTCSRGVKLVADKSIADAAGETYDAIACPGGLPGANHLRDDPTLRALLQAQNEAGRLVAAVCAAPAVVLQTHGLIAGRAATCYPADQFKSAIENYSTDPVVVSGNLVTSQGPGTSLAFALALVAELYGEEKASELKGQMLF 235
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A1V5W8D7_9CHLR (Chaperone protein YajL n=1 Tax=Chloroflexi bacterium ADurb.Bin222 TaxID=1852858 RepID=A0A1V5W8D7_9CHLR)

HSP 1 Score: 202 bits (513), Expect = 7.970e-56
Identity = 100/180 (55.56%), Postives = 137/180 (76.11%), Query Frame = 3 
Query:  384 KHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            K VLVP+A+G+EE+E+V+I+D L RAGA VTVASV + ++VT SRGV++ AD +I DC    +D +  PGGMPGAVHL++S  L A+LR Q + GR+ AAICAAP VVL  HGLL+G++ATC+P+     + P+ V ++VVVDGN +TS+GP T++ FALQL   LFGE KA+E+G ++L
Sbjct:    2 KRVLVPIAEGTEELEAVSIVDVLRRAGAEVTVASVMERLQVTASRGVKLVADARIGDCATEAYDLIALPGGMPGAVHLRDSAELTALLRAQAAAGRLYAAICAAPVVVLQHHGLLEGRRATCHPSFEKELRNPEAVAQRVVVDGNCVTSRGPGTAVEFALQLAALLFGETKAREVGAAML 181
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BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A8J5XK53_DIALT (DJ-1_PfpI domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XK53_DIALT)

HSP 1 Score: 199 bits (507), Expect = 1.580e-54
Identity = 111/182 (60.99%), Postives = 136/182 (74.73%), Query Frame = 3 
Query:  384 KHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQL--VDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            K VLVP+ADGSEEIE+V IIDTLVRAGA VTVASV D  +VTCSRGV+I AD  I D   R +DA+V PGGMPGA HL +SE L A+L+ Q S GR+ AAICAAP VVL  HGLL G+KAT +PA  F+DK+     V E+VVVDGNL+TS+GP T++ FAL +VE L+   +AK I  +++
Sbjct:   37 KQVLVPIADGSEEIEAVCIIDTLVRAGAHVTVASVMDQHQVTCSRGVKIVADALIGDVGARTFDAIVIPGGMPGAEHLAKSEPLAALLKAQASAGRLNAAICAAPVVVLQKHGLLVGRKATAHPA--FSDKLLDQAPVSERVVVDGNLVTSRGPGTALEFALAIVELLYDTPQAKAIANAMV 216
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A7S1UBZ8_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBZ8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.770e-54
Identity = 109/200 (54.50%), Postives = 135/200 (67.50%), Query Frame = 3 
Query:  339 GDGMETAAAADAGGAKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASV-----GDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            G G+  AAA DA G   VLVP+ADGSEEIE+  I DTL RAGA VTVASV       D+  T SR +++ AD  I  C    WD +  PGGMPGA HLKES  L+A+L  Q    R+ AA+CAAPAV LA +GLL+G++ATCYPA    + +PQ  D+ VV DGN+ITSQGP TS+ FAL+ VEAL+G+ KA E+   +L
Sbjct:   49 GRGVAMAAANDAAGGYRVLVPIADGSEEIETSCITDTLTRAGAAVTVASVMPRAEEGDLVCTMSRNLKVVADAAIGSCAGDAWDLIALPGGMPGAKHLKESAALQALLASQRDSDRLFAAVCAAPAVALAGNGLLEGRRATCYPAPALREALPQASDDLVVKDGNVITSQGPGTSLLFALRCVEALYGKGKADELAAEML 248
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A7S1XF23_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF23_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 4.960e-53
Identity = 103/182 (56.59%), Postives = 134/182 (73.63%), Query Frame = 3 
Query:  387 HVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEK---VVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            +VLVPV +GSEEIE+VTIIDTLVRAGA VTVASV +D++VT SRGV+I AD  I DC    WD +  PGGMPGA +L+ S  L  +L+ Q  + + + AICA+PAVVLASHGLL+ ++ATCYPA  F D++P  +D+    VVV GN+ TS+GP T++ F+L LV  LFG+AKA E+   +L
Sbjct:   67 NVLVPVGNGSEEIETVTIIDTLVRAGANVTVASVEEDLQVTASRGVKIVADKAIGDCLDSPWDLIALPGGMPGAENLRNSSDLAHLLKHQNGQDKRIGAICASPAVVLASHGLLNDRQATCYPAPQFLDQLPNPIDDDDVPVVVSGNITTSRGPGTALVFSLNLVHQLFGKAKADELAAVML 248
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A1G2Z6H8_9BACT (Dihydroxyacetone kinase n=1 Tax=Planctomycetes bacterium RBG_13_62_9 TaxID=1801964 RepID=A0A1G2Z6H8_9BACT)

HSP 1 Score: 193 bits (490), Expect = 1.160e-52
Identity = 108/187 (57.75%), Postives = 138/187 (73.80%), Query Frame = 3 
Query:  381 AKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDD----VEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKI-PQLVD-EKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLL 923
            AK VLVP+ADGSEEIE+V IIDTL RAGA VTVA+V       ++VT SRGV++ AD +IADC  + +D +  PGGMPGA HL++S  L  +L+KQ   GR+  AICAAPAV L  HGLLD  +ATC+P+    +K+ P  V  ++VVVDGN +TSQGPAT++ FAL+LVE LFG AKAKE+G ++L
Sbjct:    2 AKRVLVPIADGSEEIEAVCIIDTLRRAGAEVTVATVETQNLASLQVTASRGVKLVADARIADCASQTYDCIALPGGMPGAEHLRDSAELIEMLKKQKQAGRLYGAICAAPAVALRPHGLLDKVRATCFPS--LRNKLDPAYVSTDRVVVDGNCVTSQGPATAIDFALKLVELLFGPAKAKEVGSAML 186
[Close]
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Match: A0A832C0Y6_9PROT (DJ-1 family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A832C0Y6_9PROT)

HSP 1 Score: 192 bits (489), Expect = 1.480e-52
Identity = 100/182 (54.95%), Postives = 134/182 (73.63%), Query Frame = 3 
Query:  384 KHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVGDDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEAILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLVDEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLLFK 929
            K VLVP+ADG+EE+E+V+IID L RAGA+VTVASV + ++VT SRGV++ AD  I  C    +D +  PGGMPGA HL++S  L AIL++Q  +GR+ AAICAAP VVL SHGLL+ ++ATC+P  V   K     + +VVVDG  +TS+GP T++ FAL+LVE LFG+ KA EI  +++FK
Sbjct:    3 KKVLVPIADGTEELEAVSIIDILRRAGALVTVASVHERLQVTASRGVKLVADKSIKSCLDETYDLIALPGGMPGAEHLRDSRELAAILKRQAEQGRLYAAICAAPVVVLQSHGLLEHRRATCHPNFVQQLKDSTAAESRVVVDGTCVTSRGPGTAIEFALKLVEILFGKQKATEIAQAMVFK 184
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.86.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTN5_9PHAE1.000e-9276.13DJ-1_PfpI domain-containing protein n=2 Tax=Ectoca... [more]
A0A482RT38_9ARCH4.450e-6360.56DJ-1 family protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A6S9E808_HETAK2.210e-6262.64Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6V1PTF7_HETAK6.060e-6262.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V5W8D7_9CHLR7.970e-5655.56Chaperone protein YajL n=1 Tax=Chloroflexi bacteri... [more]
A0A8J5XK53_DIALT1.580e-5460.99DJ-1_PfpI domain-containing protein n=2 Tax=Diacro... [more]
A0A7S1UBZ8_9STRA1.770e-5454.50Hypothetical protein n=4 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XF23_9RHOD4.960e-5356.59Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1G2Z6H8_9BACT1.160e-5257.75Dihydroxyacetone kinase n=1 Tax=Planctomycetes bac... [more]
A0A832C0Y6_9PROT1.480e-5254.95DJ-1 family protein n=1 Tax=Proteobacteria bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:198468..205451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQJ0
PFAMsDJ-1_PfpI
Model size4298
Max annot lvl2759|Eukaryota
KEGG koko:K03152
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0006081,GO:0006082,GO:0006089,GO:0006457,GO:0006464,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009100,GO:0009266,GO:0009408,GO:0009438,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009657,GO:0009658,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019249,GO:0019538,GO:0019752,GO:0022613,GO:0030054,GO:0030091,GO:0031090,GO:0032787,GO:0033554,GO:0034599,GO:0036211,GO:0036524,GO:0036525,GO:0042026,GO:0042180,GO:0042182,GO:0042221,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046185,GO:0046394,GO:0046686,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051596,GO:0051716,GO:0055044,GO:0061727,GO:0065007,GO:0070887,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0080134,GO:0080135,GO:0098588,GO:0098805,GO:0140096,GO:1900407,GO:1900409,GO:1901135,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1902882,GO:1902884
Exons6
Evalue2.3e-102
EggNOG OGsCOG0693@1|root,KOG2764@2759|Eukaryota
Ec32 ortholog description4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
Ec32 orthologEc-01_008860.1
EC3.5.1.124
Descriptionguanine deglycation, methylglyoxal removal
Cds size891
COG categoryJ
BRITEko00000,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.86.4prot_P-littoralis_Contig76.86.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig76 201972..205410 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791566.8838854-UTR-P-littoralis_Contig76:198467..2000961680791566.8838854-UTR-P-littoralis_Contig76:198467..200096Pylaiella littoralis U1_48UTRP-littoralis_Contig76 198468..200096 -
1680791566.8978643-UTR-P-littoralis_Contig76:200234..2019711680791566.8978643-UTR-P-littoralis_Contig76:200234..201971Pylaiella littoralis U1_48UTRP-littoralis_Contig76 200235..201971 -
1680791566.9799645-UTR-P-littoralis_Contig76:205410..2054511680791566.9799645-UTR-P-littoralis_Contig76:205410..205451Pylaiella littoralis U1_48UTRP-littoralis_Contig76 205411..205451 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791566.9137313-CDS-P-littoralis_Contig76:201971..2020371680791566.9137313-CDS-P-littoralis_Contig76:201971..202037Pylaiella littoralis U1_48CDSP-littoralis_Contig76 201972..202037 -
1680791566.9280632-CDS-P-littoralis_Contig76:202812..2029071680791566.9280632-CDS-P-littoralis_Contig76:202812..202907Pylaiella littoralis U1_48CDSP-littoralis_Contig76 202813..202907 -
1680791566.9394083-CDS-P-littoralis_Contig76:203448..2035631680791566.9394083-CDS-P-littoralis_Contig76:203448..203563Pylaiella littoralis U1_48CDSP-littoralis_Contig76 203449..203563 -
1680791566.9534256-CDS-P-littoralis_Contig76:204083..2042361680791566.9534256-CDS-P-littoralis_Contig76:204083..204236Pylaiella littoralis U1_48CDSP-littoralis_Contig76 204084..204236 -
1680791566.9695354-CDS-P-littoralis_Contig76:204948..2054101680791566.9695354-CDS-P-littoralis_Contig76:204948..205410Pylaiella littoralis U1_48CDSP-littoralis_Contig76 204949..205410 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig76.86.4

>prot_P-littoralis_Contig76.86.4 ID=prot_P-littoralis_Contig76.86.4|Name=mRNA_P-littoralis_Contig76.86.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MTMACLVSSLVAALPKAHAFVGGGVRSLSKSSTSTSRLFSTTATATAYTS
NFTGRSPLAVCRHRAGWAVIATTTPTTTTAVFTRGLTGSPPALLMSGSTG
DGMETAAAADAGGAKHVLVPVADGSEEIESVTIIDTLVRAGAVVTVASVG
DDVEVTCSRGVRIKADCKIADCEPRDWDAVVCPGGMPGAVHLKESETLEA
ILRKQISEGRVVAAICAAPAVVLASHGLLDGKKATCYPAGVFTDKIPQLV
DEKVVVDGNLITSQGPATSMAFALQLVEALFGEAKAKEIGGSLLFK*
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mRNA from alignment at P-littoralis_Contig76:198468..205451-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig76.86.4 ID=mRNA_P-littoralis_Contig76.86.4|Name=mRNA_P-littoralis_Contig76.86.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6984bp|location=Sequence derived from alignment at P-littoralis_Contig76:198468..205451- (Pylaiella littoralis U1_48)
ACCTACCATGCTTGTGATGAAAAAAAAAATAAGCGACGGGGATGACGATG
GCGTGTCTAGTATCGTCGCTCGTCGCGGCTTTGCCCAAAGCCCACGCGTT
CGTCGGGGGCGGCGTCCGTTCCTTGTCGAAATCGTCAACCTCGACTAGCC
GGCTTTTTTCTACCACCGCTACCGCTACCGCCTACACCAGCAACTTTACC
GGCCGGTCCCCTCTGGCAGTTTGCCGCCACCGGGCCGGCTGGGCGGTGAT
CGCAACAACAACACCAACAACGACAACAGCCGTCTTTACGAGAGGTTTGA
CGGGCTCTCCGCCGGCGCTGCTAATGTCCGGCTCAACAGGCGACGGGATG
GAGACGGCGGCGGCGGCGGATGCGGGCGGGGCGAAGCACGTCTTGGTGCC
CGTCGCAGATGGCAGCGAGGAGATCGAGAGCGTGACCATCATTGACACCC
TCGTGAGGGCGGGGGCGGTGGTGACTGTCGCGAGCGTGGGGGACGATGTT
GAGGTACGTTTGGCAACGAACAACAGCCGGCGGCTGCATTTGTGCATGTA
CGGAGCGTAGACTCTCTGTGGGTGTTTTTAGTGTTACCTTCTTTAGACCG
AAAAAGGCTGCGTATTTTTTTTGTTTTTGCTAGGGCTACTTACAAAAGGG
AGCTACCTTTGCCTTGAAATATTTATGGTCCGTATATTTTTTTTGTTGCA
GTACTTGGGTGACCGATCATGTACGCTTGTCGTGAAGAGTTTCAGGTAAG
TTAGGAGCATCACACATTCTTGAAACCTGGAGTGCTCGGGGATTAACTAT
TTCATTGTGTTGTAGGCGTTGAAGATTTGGGAGATCTGTAGTCGGTTTGA
AGAATATAATCGATCTTAGGATTGACTGTGGCTTTGGGCGGCTGGCAATT
CATGACTAGGGTTCGTGATTGCATTGTAAATCCAGCACCCAGTAGGGGGG
CTAGCTTGACCTTTTTTTTCGTTACAATCGCAGGCGACATTTTCATTTTT
TATTTCGGCCCTGTTCGCTTCACCTCCCTTTTCTCTCTTGTTGGGGGTAT
CGAAGATATATATATGTTTTGTCAATCTGCAGAAGGTACACCCGCCCGAG
ACGATGAATTCGAGGCGTGTGTTGACTTCCTCACGGAGAGAATCCCTTAC
AATCCGACCGGGACTACTTGTATGACGGAACTTTTACTGCTTTATCACAA
TGCCGCCTGTCGCAGGTGACGTGCTCGCGAGGGGTCAGGATAAAAGCGGA
CTGTAAAATAGCGGACTGCGAGCCTCGAGACTGGGACGCGGTCGTGTGTC
CCGGAGGAATGCCGGGCGCCGTGCACCTCAAGGAGAGCGAGACCCTCGAG
GCTATCCTCAGAAAACAGGTTCGAAAACATGTGATGTACGCATAACACAA
CGGGGTTTTATCTTGCGCTTTTTGCATGCCCCCGACCGCGGAAGCCGTAT
CTTCCCACTGGTTGTTGGTGGTGAATCATGACGGAGCAGTATATATCATT
CATGCGGAGAAGTATAAACAAAATGTGTTGTGTGTGATGCAACAGATACC
TGGTAGTGTCTTTTGGTGTGCAAAATTGCACAACAAATGCACGGGTACGC
AGGCCGGTCGTGTCGCGAGCCATGATGCAGTAGATTCAGGTGCTTCTGCT
CTGACCTTACAAAAAACGGCATCCGACGAAAGGGTCGATCTAGGTATCCT
CGTGATAGTATACTCGACGCGGGTTGAAGCGAACACCAGGGGTTGATGTG
AGTCCTCGTTTCGTTGCTATGTCGTATCATACTGGTAGGTAACAGCGGGC
CTTGTTCGCCGCAGCCTTTGCCTCTACAACAGCTTTCAACGCTTGCCTCG
CTCGGTGAAACGTGCGCCCCAACAAACAATTAAAACAGATTTCAGAAGGG
AGGGTCGTTGCCGCGATCTGTGCCGCCCCCGCTGTGGTGCTTGCCTCGCA
CGGGCTGCTGGACGGTAAAAAAGCAACGTGCTATCCAGCGGGCGTATTCA
CAGGTGATTCGATATTTTTTTCGAGGGGGGGGGGCAACACCTGGGTACTA
CAGCAGTAAAATCAATTATATTGACTATATCATGCTGACATGCTGACTGG
TTCGACAGCAGTAGGAACCGGTTCATCCGCTAAAAACGTTTGAATCACAG
CGGTTGCAAGGATTTCCGTCGAATCTATGATCAAGTAGCTTCCTCTCCCA
CCGACCATATAGGTGTGTGTTAACCCCCATCATATATTTACAACTGTCAG
GTCCTCCGTGGTTCTGTTTTCATTTTTTGGCGTCTCCAGAGCTGAGAATC
GAGGACCGATCGATCAGAACACTTTTCCCCGCGAAGATACCACGTACACA
CACCTCGATGTACCATTGAAGGCTATCTTGCGACGGGCCCGCCACAGCCT
TTTTTACGCGTTTCGACTGCGCACCACACTCCGTTGCATGTATCAACTGA
TGTCAGCAACAGTTGTCATGATGACCGAGCGAAGCTATGCCCCCCCCCCT
CCCCCCGTCACGCATGACACCACACCGCATGACTCGCACCGCAGACAAAA
TCCCACAACTCGTTGACGAAAAAGTGGTGGTCGATGGGAACTTGATCACG
AGCCAAGGCCCCGCCACTTCCATGGCGTTTGCCCTCCAGGTGAGGATGTA
TTCCGACCACTTTTTTTATCACAGTAGCGACGATTTTTCCCCCAACTGAA
GGCGGGTTGAGCGCAAAACGCATGGGATGTGAACCGGAAGAGATCATCCA
CGGCGAGCGGGATATATTGCGGTTGAAGCTCGTCGACCAGCTGGCTCTTG
TCATTTTTTTATTCGCACACGGACGCCCAATGCAACAAACTACGGGTTCT
GTTAAGCACACACACATAGCTCCGGCTGTGCGCGCGGGCGCTGCGGGTGT
GTGCAGACGAGCTCGCGTCACACGTTGATTTCGTGGCATGAAGGTCGGAC
CGAGTTTTGGCAGAAATGTGCAACTTCAACGAAAGGACACCTCATAGAGA
CGGGGGCTCATGCCTTGAATTACTTGCAGAGAGGGTTCCCTATCTTGTGG
AATTGCGAAAGCGTGAACGACCAACACGCCTTCAGTCGCAGAGAAGAGAG
AAACAGCCGGCCGGGTGCGGCCATGCCTTCGCACGAGCCATCCAAACCCA
GCTTGCCCCCTTGGCCTGACGTGGCTTGTCTGCAGCAAGCGACTTGTTTT
CATCATTGTTCTTCACTGGCGCAATACGTGTACATATATACTTTGAAGTT
TGTATTGTTTACTTAAGTATATCGTTTTTTCACCGGTTAATGTTTTCCGT
AATCGTTGCTCATATCCATGCTGCACTGCTGTGCGCTAGACTCCTCGCTG
TGCTCAGTATCACACCCGACCCGTCGCTCTGTGCCGTTGTCCCATCCTAC
GTGCACCCCACCAGTTGGTGGAGGCTCTGTTTGGTGAGGCGAAAGCGAAA
GAAATTGGCGGAAGCCTGCTCTTCAAGTGAATGGCGGAGCGGGATACTGT
TCGGCTTTGCTATGGATGGACGTGGATTGTGGTATATCAGTGCGTGTGAT
ATTATATGTACGTAGCCTCTTTTCGGAGAGTTTTTCGGTCAGTTTTTGTC
GAATGAACGGGAGTATTTCTGAGATTGTCTGTATTGATGTGCCTCTTTAC
ACGAGGATCTAGGAGCGCATATATTCATATATTCTACTCCGTACGAAGTT
TGATTCATATACGAAGTATTACATAAATATATATATGGATATATATATAA
ATATATTTCATATGTGGATACCATGGATTTGCATCTTCCTAGGGAATACA
GGAACGCATACATAACGGACAGATTAGGAGATCTACCGGACAAATATAAT
ATCCCACGATCTCCGAACCCTGGACACAGAGAATCTGGAAATGAAATTGC
GACCATGACCGGATTCGTGGGTCAAGGAAGGTCCACGATGGCCTCCCTTG
CCACACTCTCTCTACCTAGCCCTGATCGAGCTCAGCTCGGCCATCACTTG
ACATTCCTCGTCACACTGCAACGAGAGGAAACATTAGCCCACCTACGGTA
ACGGGTTATAAAAGTTACCACGTCGCGGGACTTCACTGCTGTAGCGAGCA
GAGGCCTTCCATAGTGGTGTTCGACGAAGTGGAAAATTTTTCGTGGGGTT
ACAGTGTCAAGCACATCGAACACGAAATAATTTCAAGCATCATGCCTTCT
CAATCTGCGATCAAAAAAGCAACGAAGAGGCTGAAGCAGCAGGAATCCAC
GCAACTTCCCAAAAAGAAAGGCAAGAAACCGCAGCGGCTTTCATCGCAAG
ATGGGGGTGGCTCGGCTGCTGAAGGAACCGCTGATACGATCAGCAACGCC
CATGACGAGGAGTCTCACGACCAGACTCGCTCGTCATCTATGGCTCAAGA
CCAGCCATCGAAGGATGACAGTCAGGAAAATCCTTTCCTTCACCTTGATC
AGGGCGATGAACCTGACGAAAGGGAAGAGGAGGATGCTGCTGACTTTGCA
AGCGAAGACGCCGGCGAGGAAGGAGAGATGGAAGTCGAGACGAGTAGCGC
CGTCTCGACTACCGCTGCCCCTAACCTGCCGCCATCTCGCGACAACGCAC
GTTTTTCTTAAGCTGTTCCTTCGAGCTTGAGAGATGCTGGGAGGTCAATC
GTTTTCAGTGTGAAGCGGTCTGGTTGCGCGGGGTAAGGGTATCCATGCTG
GGATTGGCCAGCTACTTGAGAGAACACGGTCTGCATCGGAGCAATGTTCA
CGGGAGTAGTTTGTCCGATTGATTGCTGCTGTAACAAGTTGGGCTGTTGC
TGTGACAAGTTGGGCTGTTGCTGCATGGATTGTGGTGAAGTCTGCTGTTG
TTGGGGCAGAGTGGTTGCATCGTGTGCGAGGTGGGCGCTATCATTGGCCT
GGTTTGCTCTTGTTGAGGGGAGGGGGAGGAGGATGGAGGTTGGACTACTT
GTACTTCAGAAGGTTCGGCTGCTAGATCAGATGCAATCTTTCTCGGGTTC
ACCTGATCGATTTCCGGCCCATGAGTGGAGCCAGTCACCATTTGCATCAC
ATGTTTCGGCGGTGAGGTCCCCTCCTCATCAGCTTGCCCATAATTTTCCA
GAATGTAGCTCTCGACTGCTCCTCCAGGTTGGAAAGAAAAACGTGCGTTG
TCGCGAGATGGCGGCAGGTTAGGGGCAGCGGTAGTCGAGACGGCGCTACT
CGTCTCGACTTCCATCTCTCCTTCCTCGCCGGCGTCTTCGCTTGCAAAGT
CAGCAGCATCCTCCTCTTCCCTTTCGTCAGGTTCATCGCCCTGATCAAGA
TGAAGGAAAGGATTTTCCTGACTGTCATCCTTCGATGGCTGGTCTTGAGC
CATAGGTGACGAGCGAGTCTGGTCGTGAGACTCCTCGTCATGGGCGTTGC
TGATCGTATCAGCGGTTCCCTCAGCAGCCGAGCCACCCCAATCTTGCGAT
GAAAGGCGCTGCGGTTACTTGCCTTTCTTTTTGGGAAGTTGCGTGGATTC
CTGCTGCTTCAGCCTCTTCGTTGCTTTCTTCAAAATGAGACCAGCCTTCT
TGTGGCTCGCCGCAATACGACATACTCCGAGTATATTACATGAATATATG
GATATATATTCACATATTTCATATATGAATATGAATGTATTCATATATTC
ATACTGCTTGTGCGTCATTTCAAAGGGTTGTTTGGTTTCGGCACATATTT
TATTTTAGTTCAACGTGGGCTCGCTCCGCCTCGAAGTAAGTGCCGTATTG
CTTGCACGGTAAGTGTTCAGGGGAGAAAATCGTTTGGTGTTGTCGAGAGG
CAGGCAGGCGTGCTCGCCATCTCGGCACCGCTAGTGAACGTACTGCTTCA
AGATATTGCTTACCCGATATGTTTGTTTTTTAAGGACGCCCTCATGGCTC
GTAACATACTGCCGCTGCTGCTGGGCGTCATGAGAGTGCGGATCAAACGT
ATGGTCATTAGGCGTTTGTGTGTGACCACTGGAGGAGGAGAACTCCCTTT
CCAATCGGTTGCATCATCAGCGCGGGGGATAGAGGTACTGAGAACAGGCC
ATGATGGCTGTGTATGTACCTAGAAACAAGGAGTTGGTTTGCGGCATGTA
CATGTACGGCGTGAAAGTAGCCGTATCATACGGGTTGTGCGTGCGAATCC
CGGCCGAGGGCTTCATCCAAAAACCTCGGAGTGGAAAGCGATGATTTCGT
TTGACGCTTACCATACGAGTGCGTAAAACTCAACTCCAAAGAAAAATGTC
GACGAGGCATTTTTTCGCATAAATAATAAGGGGTGGTGCAGGGGGCTGCG
AGGTTTGAGACCGCCTGGCACGAGGATGAGAAAGAGGCAGCCAGAAAACG
AGCGGGGAAACGAGACAGGGAATAATCCAGTGCAACAACCGAGGAAAAAA
CCCAGGAGGAGAAACGGCAGGGGAATCTCGGGGAAGCAAGCGTAGAAAGA
TTCGGAATGACGTGACAACGGTGGCATAGGAGAGCAGGAAGGAAGAGATA
AAACGACTGGCACGGCATGCACCGAATTGAATGACTGCTGCTGCTTTGGG
ACAGCACGCACGCTCCTACTGGTGGTAATCCCCCATCTCATTGCCCCCCC
CCCACCCTTTTGCCGCGTCTTGCAATTTCGATTCTGAATTATCATAACTC
CGACAGGTAAACTTCTTTTCTGTCGATTGTTTTCTTTGCTTTGTAAGTTT
GTTGCTTTGTCTCGTTCGTGTGTCCTGATATGAATTGCATCCTCTCGATG
CCTGTGAGAGCTCGGCAATTGGCACCGCCACGTACAATATACCCGATGAT
TGGTTTTTGTTTCGATTTTGGTTACACTACGACTACCAGCGTAACTGCTT
CTGCTGCTACTACTGCTGCTGTTAGTTGTTCCTGCAGTGTACTTCCTTCT
TCATGTCCGCGTAGTGAGATATTTCGGGGTCGATCTAATGTTGTTGTAGT
CGTCTTACGGTAGGCCCCTATCTATACAAACCGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig76:198468..205451-

>mRNA_P-littoralis_Contig76.86.4 ID=mRNA_P-littoralis_Contig76.86.4|Name=mRNA_P-littoralis_Contig76.86.4|organism=Pylaiella littoralis U1_48|type=CDS|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig76:198468..205451- (Pylaiella littoralis U1_48)
ATGACGATGGCGTGTCTAGTATCGTCGCTCGTCGCGGCTTTGCCCAAAGC
CCACGCGTTCGTCGGGGGCGGCGTCCGTTCCTTGTCGAAATCGTCAACCT
CGACTAGCCGGCTTTTTTCTACCACCGCTACCGCTACCGCCTACACCAGC
AACTTTACCGGCCGGTCCCCTCTGGCAGTTTGCCGCCACCGGGCCGGCTG
GGCGGTGATCGCAACAACAACACCAACAACGACAACAGCCGTCTTTACGA
GAGGTTTGACGGGCTCTCCGCCGGCGCTGCTAATGTCCGGCTCAACAGGC
GACGGGATGGAGACGGCGGCGGCGGCGGATGCGGGCGGGGCGAAGCACGT
CTTGGTGCCCGTCGCAGATGGCAGCGAGGAGATCGAGAGCGTGACCATCA
TTGACACCCTCGTGAGGGCGGGGGCGGTGGTGACTGTCGCGAGCGTGGGG
GACGATGTTGAGGTGACGTGCTCGCGAGGGGTCAGGATAAAAGCGGACTG
TAAAATAGCGGACTGCGAGCCTCGAGACTGGGACGCGGTCGTGTGTCCCG
GAGGAATGCCGGGCGCCGTGCACCTCAAGGAGAGCGAGACCCTCGAGGCT
ATCCTCAGAAAACAGATTTCAGAAGGGAGGGTCGTTGCCGCGATCTGTGC
CGCCCCCGCTGTGGTGCTTGCCTCGCACGGGCTGCTGGACGGTAAAAAAG
CAACGTGCTATCCAGCGGGCGTATTCACAGACAAAATCCCACAACTCGTT
GACGAAAAAGTGGTGGTCGATGGGAACTTGATCACGAGCCAAGGCCCCGC
CACTTCCATGGCGTTTGCCCTCCAGTTGGTGGAGGCTCTGTTTGGTGAGG
CGAAAGCGAAAGAAATTGGCGGAAGCCTGCTCTTCAAGTGA
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