prot_P-littoralis_Contig76.48.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.48.1
Unique Nameprot_P-littoralis_Contig76.48.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length798
Homology
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 525/779 (67.39%), Postives = 590/779 (75.74%), Query Frame = 0
Query:   29 PQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPP-------PAPPMTTSDG--GAVGGESAGTFVIKAMGIEVEKGGGGDGDN----------SRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALD-SGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWP-EPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAG--GGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDE-GNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRT-MAG-EESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTGDARFST 781
            P TTC FC   FPTRS+MFRHLERP  +CPAPRED GEK+LL+VGYD  LM     A  + GE A +TPP       P PP+ TS G   AVGG SA + V+KAMGIEVE+                  SRP GFSQAS+VGSRTCPLLAQE EVSATADTIC++APTTVP EGIR WLD TNAALD S  N + A+RLLGRM VP TFHAEIHAKRRRYEY++PAWMLDETA+ PW   P+G EN+IP LRRLR +G+RPFGHC+G+HDGTRRRCPLWHNFSASALPHSPSSLRRL+RFYAMEV +S     +   AG  G +YVCLSI+GDAFMSQQVRGMVALAVAGARGL+SAE IAA IDPTRQEDLLPVPLAPA PCSLAEVGY+GWQ RLGV G GVCMSPGAEQR C PLEGWSD  SRS GA FRR VL+SAARWWE++ GG GWL+DVL PGA+KL RE+  S+ RAG   D  G+ +  G G  D  G R  SR E    +G  D   LS E+L++L++AP  YAKVL LLR+A ASG WP ST SRSLVI G++ +R D E     GR+++T +AG  +  D+D   A A  A  A+  +  +       +     XXXXXXXXXXXXXXX  SFTLGAFPPPC PPRGN LF  LARAAFELEAALLP RP STTIAVNRNARFKPHVDSG+GAGQS+SLIVGLGDY  GELVVEGEE DIRYRPLEFNGWTQRHWTRPF GERYSLVWFTPKGCEG++GDARFS+
Sbjct:   31 PVTTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLVVGYDSRLM-----AGDKGGEGA-VTPPTSDTYNMPTPPVGTSSGTAAAVGGASAASSVLKAMGIEVERRRDXXXXXXXXXXXQSYCSRPGGFSQASSVGSRTCPLLAQEEEVSATADTICLRAPTTVPQEGIRKWLDDTNAALDNSDGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRCPLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQEDLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDGGVGWLKDVLQPGAVKLGREVQVSDMRAG---DLEGDRSNEGRGEEDGCGGRSGSRDESRRGAG-ADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRAD-EMCSGTGRSKQTDLAGCAKGRDSD-KTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXXSFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGISGDARFSS 797          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.890e-77
Identity = 272/801 (33.96%), Postives = 341/801 (42.57%), Query Frame = 0
Query:   33 CIFCGREFPTRSSMFRHLERPSESCPA---------PREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWPEPK----------GHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYT-GWQTRLGVD---------------------------GGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVI-------VGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXX-----------SGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPK 768
            C  C + F TR+++FRHL   +  C A              G KI L+ GY       A AAI                      GA+                        G    P G + AS+  +     LAQE EV+A AD +            +R  L   NA L  G      VR+LG M V   FHAE  A+RRRY+Y++P  +L   A                  G  ++   ++R++    R +G    D  G R  C   HNF AS  P  P + RRL+RF   +            A  G   V LS++ +AF+SQQ R MV L +A ARG +  + I A +D    E +   P APA    LAEVGY+     + G+                                                                       W E++  G+ W+   L      LR  L                          +  + +  G P           LS  E  AL  AP  YA+VLRLLR+ADASG WP S+  R  VI       VG+++E  + +   EA      +  + +    GA  T  A I+                 XXXXXXXXXXXXXXXXXXX            GSF++G  P  C  PRGN LFP L RAAFELE  L+PNR  S+TIA+NR+A+F+PH DSGAG+GQS SLIVGLGDY  GELVVEG E DIRYRPLEFNGWTQRHWT PF GERYSLVWFTPK
Sbjct:    5 CKLCAQPFDTRNALFRHLLDLNTECGAFCASKGMKSTATTRGRKIALLFGYHGVSSDAAVAAIW---------------------GAI-----------------------TGSTEPPDGLTAASSWIASNNRALAQEPEVAAVADVMTFNM--------LRGSLSDVNARLPRG------VRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYG--GTDQRGRRVCC---HNFCASTAPTEPIATRRLFRFKHTD----------SAALRGRACVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALDAQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFGLSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFLQRWR----------------------DSKQLAQSGPPQ------PPLSLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIANGAAAAVGEEDES-EEQVPAEAAAVELLVPAQLATSGPGA--TVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPK 701          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC)

HSP 1 Score: 253 bits (647), Expect = 3.270e-69
Identity = 184/512 (35.94%), Postives = 252/512 (49.22%), Query Frame = 0
Query:  286 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG-----EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA----GWLRDVLVPGALKLRRELDA------SNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEE--RGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFP-PPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            +HNF+ S L H   + RRL R Y     R  +         +NA     ++ LS+SGD F++ QV  +V L +A ++G++  ED   C+       L+  P AP       E  Y   +        G C +    +++ +  +GW+D+ +      +++ V   AA  W    ED++G       W ++VL P A++ + +L        S +        GG +                          ++  + S+E  TA+   P+ + KVLR LR AD SG WP +T  R LV+V    E      +  FE+G                      A  A+++V+ + +    + K                    SGSF++GA P   C  P+GN LFP L RAAFELE AL PNR  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GELVVEGE+ DIRYR LEFNGW QRHWT PF GER+SLVWFTPKGCEGV G
Sbjct:  345 YHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVID-EDFCDCVFDEAYPHLVSTPAAPTTGMYAGEAYYMSME--------GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMALGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVLHATTGGAETRA-----------------------LEPPIASIE--TAI---PSLFEKVLRYLRDADKSGFWPSTTPKRQLVMVSTVVEGKSESCDNPFESG----------------------AMPASLSVAHMKARSNKIDKSSAYIYVEGEGGA-------SGSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGVRG 790          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO)

HSP 1 Score: 251 bits (641), Expect = 5.860e-69
Identity = 244/822 (29.68%), Postives = 358/822 (43.55%), Query Frame = 0
Query:   28 LPQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNG----------EKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASA-VGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPP---TFHAEIHAKRRRYEYVVPAWML--------------------DETAQI------PWPEPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRC--------PLWHNFSASALPHSPSSLRR----------------LYRFYAMEVFRSP-RGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGA----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            + + TC  CG EFP+RS++FRHL+  S  C +  E  G           K+LL+ GY C L  T +A                                   ++K +           G++ +P   +++ A +G RT  +   E      ++ +  + P+   LE +  W+D+ N  L+        + L+GR  +     TF+AEI    RR EY++P   L                     ET++        +P     + +    R+++    +     + +HD + ++         P     S +      + L+R                 YR       R+  R  GE        ++ LS++GD F+  QV  ++ + +A ARGLV  +D+  C+   +   L+P P AP++     E  Y  W+ ++        +SP    R     EGW+D  +      ++  V E  AR W     D+ G       W   VL P + +  ++L+   +   A+         V   S  E +       PS N   VD T+            PA + KVLR LR+ADASG WP +T  R +V++    +    +  F       ++A     DA G          A N     S   + A+                    SGSF++GA P   C+ P+GN LFP L +AAFELE  L P+R  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GER+SLVWFTPKGCEGV G
Sbjct:    1 MQKATCHGCGEEFPSRSAIFRHLKETSGQCLSKEEYQGYLQYLQEQDRHKVLLLYGY-CGLEGTEAAQ---------------------------------KLLKIV----------QGEDVKPDKINRSYANIGRRTQLVKQDEGTGGVISEVLATRLPSI--LEPVDNWIDRMNTQLEPE-----GIYLIGRHEMKGKGGTFNAEIDVTHRRVEYMLPLDFLYCSNIENMSRDEFFDTLPDFTETSEYVSKVGRDYPTLATVKYLFGLKRKMQSLTTQIIPMDADEHDSSAKKMEREQQSKRPKSQQKSKNGNKPKTNLLKRRRFHNFTPSCMAHEYVAYRRMDRVYHRATIRFDGERRP-----FLVLSLTGDLFLHGQVCRVIGVFLALARGLVD-QDMVECLFDEKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVK-----AVLSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWLTGGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQAS-------LVVSRKSAAEVSELI----PSLNL--VDPTV------------PAVFEKVLRCLREADASGLWPSTTPKRQMVMISSLTDPNATDEDFLP----NSLA-----DAHGK---------AKNNKGQRSSAYIFAEGEGGA---------------SGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGVHG 699          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.350e-65
Identity = 179/537 (33.33%), Postives = 252/537 (46.93%), Query Frame = 0
Query:  280 RRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFR-SPRGGG-----------------EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERG-----DIEGGFEAGRNRRT-----MAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP--PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            RRR   +HNF+ S + H   S RRL R +     R  PR                      N+     ++ LS+S D F++ QV  +V L VA ARGL+  +D   C+       L+P P AP +     +  Y  W+        G   S  + ++      GW+D  +      ++  V + A + W    ++Q    G       W   +L+P A K R+ L    +     G    +D+++ +                     V   ++S   L      P  + +VL LL++AD SG WP +T  R LV+V +  + G     D    F++ +  ++     M  + + D              +  SA + EE                         SGSF++G+ P    P  P+ N LFP L +AAFELE AL P+R  S+TIA+NRNA+F+PH DSG+GAGQS SLIVG+G Y  GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct:   65 RRR---YHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLID-KDFVECVFDENYLHLVPTPPAPLIGMYSKDAFYMSWE--------GKAKSVLSPRQTDRYPGGWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHLQDYRQWKSLQGKTPLSDSSISQ--------------------MVSNNIISNSSLDPT--VPKVFQRVLSLLQEADKSGSWPSTTPKRQLVMVSNHVDSGKDGDKDTSNPFQSYQQPKSLSVAHMKAKSNRD--------------IRSSAYEFEE--------------------GQGGASGSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGIRG 533          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS)

HSP 1 Score: 238 bits (608), Expect = 8.010e-64
Identity = 185/514 (35.99%), Postives = 247/514 (48.05%), Query Frame = 0
Query:  286 WHNFSASALPHSPSSLRRLYRFYAMEVFR---SPRGG--GEENAAGGGE---------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLE-GWSDNISRSAGADFRRGVLESAARWW------EDQQGGAG--WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            +HNFS + L H   + RRL R Y     R   SP  G   E+ +A   E         ++  S++GD F+ +Q R ++ L +A  RG++ +E I  C+      +L+P P AP+      E  Y  W+ RL        +SP    R C   + GW++    SA   +   ++   A  W      +D +  A   WL DVL P A K R  LD   R   A  +    D  + E                    ++   + S++ +      P  YAKVL  LR AD+SG WP +T  R LV+V        ++    A         ++ ND              +   A   +E                         SGSF++GA P   C  P+GN LFP L +AAFELE AL P R  S+TIA+NRNA+F+PH D+GAGAGQS SLIVGLGDY  GEL+VEG + DIRY P+EFNGW QRHWT PF GER+SLVWFTPKGC+GV G
Sbjct:  352 FHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDSE-IIECMFDEEYANLVPAPPAPSCGLVAGESTYMTWEGRLK-----TILSP----RRCDRYDKGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENYWLDDVLNPWATKTRVILDDYRRWKTAKEESSAIDGTLAE--------------------SLLPPVSSIDTMV-----PELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVA-----MHVAKKKND--------------LRSDAYTFQE--------------------GEGGASGSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGVRG 791          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2SC44_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SC44_9STRA)

HSP 1 Score: 210 bits (534), Expect = 3.400e-59
Identity = 123/243 (50.62%), Postives = 145/243 (59.67%), Query Frame = 0
Query:  534 KAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            K P  Y KVL LLRKAD S  WP +T  R LV++   E+                   E+ ND        T   AA+  +  +S  +  A                     SGSF++GA P   C  P+GN LFP L +AAFELE AL PNR  S+TIAVNRNA+F+PHVD+GAGAGQS SLIVG+G Y  GEL+VEG++ DIRY  +EFNGWTQRHWT PF GERYSLVWFTPKGCEGV G
Sbjct:   17 KVPLLYEKVLNLLRKADTSELWPTTTPKRQLVMISTNED-------------------EKEND--------TCLSAALIKAQSNSGTRASA-----------YTFKEGQGGASGSFSVGAMPGVQCEQPKGNTLFPELMKAAFELEIALCPNREPSSTIAVNRNAQFRPHVDNGAGAGQSTSLIVGMGTYVGGELMVEGKKHDIRYEAIEFNGWTQRHWTLPFVGERYSLVWFTPKGCEGVHG 221          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4ELS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELS6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.140e-57
Identity = 172/505 (34.06%), Postives = 248/505 (49.11%), Query Frame = 0
Query:  282 RCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGE--ENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESA-ARWWEDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP-PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            +C  +HNF+   + H   + RR+ R Y     + P    E  E+      Y+ LS+SGD F++ Q   +V + VA   G++  E I  C+       L+P P AP      +EV Y   + R         +SP    R     EGW +  +     D+++ V +   ++W ++ +  +G       W  +VL+P A K +R L+   R       K   + ++ + +    +   + G  SS++  +      +E +     AP  Y  VL  LRK D SG WP ++  R +V+V +    GD+                + N   G++A A A       +  + + K  A                     SGSF++G  P      P+ N +FP L RAAFELE  L P R  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEG++ DIRY+ LEF+GW QRHWT PF GER+SLVWFTPKGCEG+ G
Sbjct:  370 KCRRYHNFTEKLMAHDYLTSRRVDRIYHRATLKFPMKNCEAPESTTENTTYMVLSMSGDVFLTGQACRLVGVIVALGNGMIDPEFID-CVFDEDYPHLIPTPPAPHYGMVSSEVHYANQEGRTK-----RILSPRMSTRY---KEGWCNETTIRRMKDWQKEVYKFVDSKWKKNGRDESGRLKSEQEWTENVLLPWADKAKRHLEDYKRW------KKNQEQSLTKPNFSLASTKEASGAASSSAPELPPAP-QIEPIDPT--APDIYHDVLSHLRKLDKSGEWPSTSSKRQIVMVSNSAT-GDL---------------NDKNSGPGSLAIACAK------AKRNEQTKSCAYSFVEGQGGA-----------SGSFSVGIMPGGLQKQPKANSMFPDLVRAAFELETKLFPEREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYDGGELMVEGDQHDIRYKALEFDGWKQRHWTMPFNGERFSLVWFTPKGCEGMKG 823          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4QKS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKS2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.120e-57
Identity = 167/501 (33.33%), Postives = 238/501 (47.50%), Query Frame = 0
Query:  286 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG---EENAAGGGE--------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA-----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKA----PAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYS 761
            +HNF+++ + H   + RRL RF+     R    G    EE    G          ++ L+++GD F++ Q R ++AL +A  RG +  EDI  C+      +L+P+   P+         Y  W+ ++        +SP   ++A L   G++D  +  +   F+  V    A  W    ED   G       W  +VL P A+K + +L    +                     E  R  S         N +  M++     +L+      P  + KVL+ LR+AD+SG WP +T  R LV+V  KEE  D  G         T+   + N +          ++A ++ A  ++E                         SGSF++GA P      P+GN LFP L +AAFELE AL P R  S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEGE+ DIRY+ +EFNGW QRHWT PF GER+S
Sbjct:   68 FHNFTSTVMAHEFLAYRRLDRFFHRATVRFDENGAADKEEELPEGSNNAFHSKRPFLALTLTGDLFLNGQARRVIALFLAICRGCID-EDILDCVFDEEYTNLVPIVPLPSFGMYAEGSTYMSWEGKIK-----AILSP---RKADLYDRGFNDEDTIRSVEHFQHDVFREVASAWCRKGEDNVTGRLVSEQKWTEEVLQPWAVKAKEQLQDYRKWK-------------------EAKRLVS-------DSNTETEMVAETLAPSLESVDTSVPHLFQKVLKYLREADSSGLWPTTTPKRQLVMVSTKEE--DATGTQNDNNGSDTIVSPKINTS----------LSAAHMRAKSNKE----------IRSSAYAFVEGQGGASGSFSIGAMPKKQSEQPKGNTLFPELMKAAFELEIALCPEREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYTGGELMVEGEKKDIRYKAIEFNGWKQRHWTLPFHGERFS 511          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A448ZRN1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.190e-56
Identity = 170/499 (34.07%), Postives = 234/499 (46.89%), Query Frame = 0
Query:  286 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGAG----WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 775
            +HNF+   + H   + RRL R Y     + P     E+      Y+ LS+SGD F++ Q   ++ + VA   GL+  E I  C+       L+P P AP      +EV Y   +        G      + + +    EGW++  +     D++  V +     W+    D+QG       W   VL+P A K +  L+   +R      +  +D +     HD     S   E S         +  +E +      P  Y  VL  LRK DASG WP ++  R LV+V   +      G  E G+   ++A               A + A       S     A+                    SGSF++G  P      P+ N +FP L +AAF LE  L P+R  S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEG++ DIRY+ +EF+GW QRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct:  371 YHNFTEKLMAHEYLTYRRLDRIYHRSTLKFPME--SESKMKTTSYMILSMSGDMFLTGQTSRLIGVIVALGNGLIDREFID-CVFDENYPHLVPTPPAPHFGVVSSEVQYANQE--------GKTRRILSARMSDRYTEGWNNEATIRRVKDWQNEVYKYVDSKWKKDGRDEQGRLRSEQEWTEKVLLPWAEKAKEHLE-DYKRWKKKQHQSSHDLSESSAKHDSHTESSYAPESS--------RIPQIEPIDPT--VPEVYKDVLHHLRKLDASGEWPMTSSKRQLVMVSSSD------GVKENGKGTESLA--------------LACLKAKRNELTGSSAYSFAEGQGGA---------------SGSFSVGIMPGGDKKQPKANSMFPDLVKAAFLLETKLFPDREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYGGGELMVEGDKHDIRYKAIEFDGWKQRHWTMPFKGERYSLVWFTPKGCEGMKG 812          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI5_ECTSI0.000e+067.39PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A835YK11_9STRA1.890e-7733.96Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
B7FNZ7_PHATC3.270e-6935.94Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JI73_FISSO5.860e-6929.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2Y9F9_9STRA1.350e-6533.33Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8C5S1_THAPS8.010e-6435.99PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A7S2SC44_9STRA3.400e-5950.62Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S4ELS6_9STRA2.140e-5734.06Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4QKS2_9STRA3.120e-5733.33Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A448ZRN1_9STRA1.190e-5634.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 224..411
e-value: 5.1E-18
score: 67.2
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 295..395
e-value: 1.8E-6
score: 28.4
NoneNo IPR availablePIRSRPIRSR001430-2PIRSR001430-2coord: 164..236
e-value: 0.004
score: 14.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 629..646
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 621..654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..522
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 192..404
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 163..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:113814..116982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.48.1mRNA_P-littoralis_Contig76.48.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 113500..117788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.48.1 ID=prot_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp
MPLHDPKPPTNGDGPTEPTPATTPLPTLPQTTCIFCGREFPTRSSMFRHL
ERPSESCPAPREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPA
PPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASAV
GSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFN
GKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWPEPKG
HENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSS
LRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVA
LAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQT
RLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW
EDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSH
DEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKAD
ASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGA
VATATAAIAAVNVSAVDSEEKLVAKDDGQQQPTAVQQQQQRGGGGSGSFT
LGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFK
PHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRH
WTRPFFGERYSLVWFTPKGCEGVTGDARFSTTPTPAAAAVGGTGGER*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020095PsdUridine_synth_TruA_C
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf