mRNA_P-littoralis_Contig76.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI) HSP 1 Score: 923 bits (2386), Expect = 0.000e+0 Identity = 525/779 (67.39%), Postives = 590/779 (75.74%), Query Frame = 3
Query: 399 PQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPP-------PAPPMTTSDG--GAVGGESAGTFVIKAMGIEVEKGGGGDGDN----------SRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALD-SGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWP-EPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAG--GGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDE-GNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRT-MAG-EESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTGDARFST 2657
P TTC FC FPTRS+MFRHLERP +CPAPRED GEK+LL+VGYD LM A + GE A +TPP P PP+ TS G AVGG SA + V+KAMGIEVE+ SRP GFSQAS+VGSRTCPLLAQE EVSATADTIC++APTTVP EGIR WLD TNAALD S N + A+RLLGRM VP TFHAEIHAKRRRYEY++PAWMLDETA+ PW P+G EN+IP LRRLR +G+RPFGHC+G+HDGTRRRCPLWHNFSASALPHSPSSLRRL+RFYAMEV +S + AG G +YVCLSI+GDAFMSQQVRGMVALAVAGARGL+SAE IAA IDPTRQEDLLPVPLAPA PCSLAEVGY+GWQ RLGV G GVCMSPGAEQR C PLEGWSD SRS GA FRR VL+SAARWWE++ GG GWL+DVL PGA+KL RE+ S+ RAG D G+ + G G D G R SR E +G D LS E+L++L++AP YAKVL LLR+A ASG WP ST SRSLVI G++ +R D E GR+++T +AG + D+D A A A A+ + + + XXXXXXXXXXXXXXX SFTLGAFPPPC PPRGN LF LARAAFELEAALLP RP STTIAVNRNARFKPHVDSG+GAGQS+SLIVGLGDY GELVVEGEE DIRYRPLEFNGWTQRHWTRPF GERYSLVWFTPKGCEG++GDARFS+
Sbjct: 31 PVTTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLVVGYDSRLM-----AGDKGGEGA-VTPPTSDTYNMPTPPVGTSSGTAAAVGGASAASSVLKAMGIEVERRRDXXXXXXXXXXXQSYCSRPGGFSQASSVGSRTCPLLAQEEEVSATADTICLRAPTTVPQEGIRKWLDDTNAALDNSDGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRCPLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQEDLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDGGVGWLKDVLQPGAVKLGREVQVSDMRAG---DLEGDRSNEGRGEEDGCGGRSGSRDESRRGAG-ADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRAD-EMCSGTGRSKQTDLAGCAKGRDSD-KTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXXSFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGISGDARFSS 797
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.000e-75 Identity = 272/801 (33.96%), Postives = 341/801 (42.57%), Query Frame = 3
Query: 411 CIFCGREFPTRSSMFRHLERPSESCPA---------PREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWPEPK----------GHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYT-GWQTRLGVD---------------------------GGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVI-------VGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXX-----------SGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPK 2618
C C + F TR+++FRHL + C A G KI L+ GY A AAI GA+ G P G + AS+ + LAQE EV+A AD + +R L NA L G VR+LG M V FHAE A+RRRY+Y++P +L A G ++ ++R++ R +G D G R C HNF AS P P + RRL+RF + A G V LS++ +AF+SQQ R MV L +A ARG + + I A +D E + P APA LAEVGY+ + G+ W E++ G+ W+ L LR L + + + G P LS E AL AP YA+VLRLLR+ADASG WP S+ R VI VG+++E + + EA + + + GA T A I+ XXXXXXXXXXXXXXXXXXX GSF++G P C PRGN LFP L RAAFELE L+PNR S+TIA+NR+A+F+PH DSGAG+GQS SLIVGLGDY GELVVEG E DIRYRPLEFNGWTQRHWT PF GERYSLVWFTPK
Sbjct: 5 CKLCAQPFDTRNALFRHLLDLNTECGAFCASKGMKSTATTRGRKIALLFGYHGVSSDAAVAAIW---------------------GAI-----------------------TGSTEPPDGLTAASSWIASNNRALAQEPEVAAVADVMTFNM--------LRGSLSDVNARLPRG------VRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYG--GTDQRGRRVCC---HNFCASTAPTEPIATRRLFRFKHTD----------SAALRGRACVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALDAQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFGLSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFLQRWR----------------------DSKQLAQSGPPQ------PPLSLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIANGAAAAVGEEDES-EEQVPAEAAAVELLVPAQLATSGPGA--TVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPK 701
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC) HSP 1 Score: 253 bits (647), Expect = 2.330e-67 Identity = 184/512 (35.94%), Postives = 252/512 (49.22%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG-----EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA----GWLRDVLVPGALKLRRELDA------SNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEE--RGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFP-PPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
+HNF+ S L H + RRL R Y R + +NA ++ LS+SGD F++ QV +V L +A ++G++ ED C+ L+ P AP E Y + G C + +++ + +GW+D+ + +++ V AA W ED++G W ++VL P A++ + +L S + GG + ++ + S+E TA+ P+ + KVLR LR AD SG WP +T R LV+V E + FE+G A A+++V+ + + + K SGSF++GA P C P+GN LFP L RAAFELE AL PNR S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y GELVVEGE+ DIRYR LEFNGW QRHWT PF GER+SLVWFTPKGCEGV G
Sbjct: 345 YHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVID-EDFCDCVFDEAYPHLVSTPAAPTTGMYAGEAYYMSME--------GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMALGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVLHATTGGAETRA-----------------------LEPPIASIE--TAI---PSLFEKVLRYLRDADKSGFWPSTTPKRQLVMVSTVVEGKSESCDNPFESG----------------------AMPASLSVAHMKARSNKIDKSSAYIYVEGEGGA-------SGSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGVRG 790
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO) HSP 1 Score: 251 bits (641), Expect = 3.760e-67 Identity = 244/822 (29.68%), Postives = 358/822 (43.55%), Query Frame = 3
Query: 396 LPQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNG----------EKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASA-VGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPP---TFHAEIHAKRRRYEYVVPAWML--------------------DETAQI------PWPEPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRC--------PLWHNFSASALPHSPSSLRR----------------LYRFYAMEVFRSP-RGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGA----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
+ + TC CG EFP+RS++FRHL+ S C + E G K+LL+ GY C L T +A ++K + G++ +P +++ A +G RT + E ++ + + P+ LE + W+D+ N L+ + L+GR + TF+AEI RR EY++P L ET++ +P + + R+++ + + +HD + ++ P S + + L+R YR R+ R GE ++ LS++GD F+ QV ++ + +A ARGLV +D+ C+ + L+P P AP++ E Y W+ ++ +SP R EGW+D + ++ V E AR W D+ G W VL P + + ++L+ + A+ V S E + PS N VD T+ PA + KVLR LR+ADASG WP +T R +V++ + + F ++A DA G A N S + A+ SGSF++GA P C+ P+GN LFP L +AAFELE L P+R S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GER+SLVWFTPKGCEGV G
Sbjct: 1 MQKATCHGCGEEFPSRSAIFRHLKETSGQCLSKEEYQGYLQYLQEQDRHKVLLLYGY-CGLEGTEAAQ---------------------------------KLLKIV----------QGEDVKPDKINRSYANIGRRTQLVKQDEGTGGVISEVLATRLPSI--LEPVDNWIDRMNTQLEPE-----GIYLIGRHEMKGKGGTFNAEIDVTHRRVEYMLPLDFLYCSNIENMSRDEFFDTLPDFTETSEYVSKVGRDYPTLATVKYLFGLKRKMQSLTTQIIPMDADEHDSSAKKMEREQQSKRPKSQQKSKNGNKPKTNLLKRRRFHNFTPSCMAHEYVAYRRMDRVYHRATIRFDGERRP-----FLVLSLTGDLFLHGQVCRVIGVFLALARGLVD-QDMVECLFDEKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVK-----AVLSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWLTGGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQAS-------LVVSRKSAAEVSELI----PSLNL--VDPTV------------PAVFEKVLRCLREADASGLWPSTTPKRQMVMISSLTDPNATDEDFLP----NSLA-----DAHGK---------AKNNKGQRSSAYIFAEGEGGA---------------SGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGVHG 699
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA) HSP 1 Score: 238 bits (606), Expect = 4.830e-64 Identity = 179/537 (33.33%), Postives = 252/537 (46.93%), Query Frame = 3
Query: 1152 RRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFR-SPRGGG-----------------EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERG-----DIEGGFEAGRNRRT-----MAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP--PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
RRR +HNF+ S + H S RRL R + R PR N+ ++ LS+S D F++ QV +V L VA ARGL+ +D C+ L+P P AP + + Y W+ G S + ++ GW+D + ++ V + A + W ++Q G W +L+P A K R+ L + G +D+++ + V ++S L P + +VL LL++AD SG WP +T R LV+V + + G D F++ + ++ M + + D + SA + EE SGSF++G+ P P P+ N LFP L +AAFELE AL P+R S+TIA+NRNA+F+PH DSG+GAGQS SLIVG+G Y GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct: 65 RRR---YHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLID-KDFVECVFDENYLHLVPTPPAPLIGMYSKDAFYMSWE--------GKAKSVLSPRQTDRYPGGWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHLQDYRQWKSLQGKTPLSDSSISQ--------------------MVSNNIISNSSLDPT--VPKVFQRVLSLLQEADKSGSWPSTTPKRQLVMVSNHVDSGKDGDKDTSNPFQSYQQPKSLSVAHMKAKSNRD--------------IRSSAYEFEE--------------------GQGGASGSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGIRG 533
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS) HSP 1 Score: 238 bits (608), Expect = 3.090e-62 Identity = 185/514 (35.99%), Postives = 247/514 (48.05%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFR---SPRGG--GEENAAGGGE---------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLE-GWSDNISRSAGADFRRGVLESAARWW------EDQQGGAG--WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
+HNFS + L H + RRL R Y R SP G E+ +A E ++ S++GD F+ +Q R ++ L +A RG++ +E I C+ +L+P P AP+ E Y W+ RL +SP R C + GW++ SA + ++ A W +D + A WL DVL P A K R LD R A + D + E ++ + S++ + P YAKVL LR AD+SG WP +T R LV+V ++ A ++ ND + A +E SGSF++GA P C P+GN LFP L +AAFELE AL P R S+TIA+NRNA+F+PH D+GAGAGQS SLIVGLGDY GEL+VEG + DIRY P+EFNGW QRHWT PF GER+SLVWFTPKGC+GV G
Sbjct: 352 FHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDSE-IIECMFDEEYANLVPAPPAPSCGLVAGESTYMTWEGRLK-----TILSP----RRCDRYDKGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENYWLDDVLNPWATKTRVILDDYRRWKTAKEESSAIDGTLAE--------------------SLLPPVSSIDTMV-----PELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVA-----MHVAKKKND--------------LRSDAYTFQE--------------------GEGGASGSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGVRG 791
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2SC44_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SC44_9STRA) HSP 1 Score: 210 bits (534), Expect = 3.540e-58 Identity = 123/243 (50.62%), Postives = 145/243 (59.67%), Query Frame = 3
Query: 1914 KAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
K P Y KVL LLRKAD S WP +T R LV++ E+ E+ ND T AA+ + +S + A SGSF++GA P C P+GN LFP L +AAFELE AL PNR S+TIAVNRNA+F+PHVD+GAGAGQS SLIVG+G Y GEL+VEG++ DIRY +EFNGWTQRHWT PF GERYSLVWFTPKGCEGV G
Sbjct: 17 KVPLLYEKVLNLLRKADTSELWPTTTPKRQLVMISTNED-------------------EKEND--------TCLSAALIKAQSNSGTRASA-----------YTFKEGQGGASGSFSVGAMPGVQCEQPKGNTLFPELMKAAFELEIALCPNREPSSTIAVNRNAQFRPHVDNGAGAGQSTSLIVGMGTYVGGELMVEGKKHDIRYEAIEFNGWTQRHWTLPFVGERYSLVWFTPKGCEGVHG 221
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4QKS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKS2_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.020e-56 Identity = 167/501 (33.33%), Postives = 238/501 (47.50%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG---EENAAGGGE--------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA-----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKA----PAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYS 2597
+HNF+++ + H + RRL RF+ R G EE G ++ L+++GD F++ Q R ++AL +A RG + EDI C+ +L+P+ P+ Y W+ ++ +SP ++A L G++D + + F+ V A W ED G W +VL P A+K + +L + E R S N + M++ +L+ P + KVL+ LR+AD+SG WP +T R LV+V KEE D G T+ + N + ++A ++ A ++E SGSF++GA P P+GN LFP L +AAFELE AL P R S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y GEL+VEGE+ DIRY+ +EFNGW QRHWT PF GER+S
Sbjct: 68 FHNFTSTVMAHEFLAYRRLDRFFHRATVRFDENGAADKEEELPEGSNNAFHSKRPFLALTLTGDLFLNGQARRVIALFLAICRGCID-EDILDCVFDEEYTNLVPIVPLPSFGMYAEGSTYMSWEGKIK-----AILSP---RKADLYDRGFNDEDTIRSVEHFQHDVFREVASAWCRKGEDNVTGRLVSEQKWTEEVLQPWAVKAKEQLQDYRKWK-------------------EAKRLVS-------DSNTETEMVAETLAPSLESVDTSVPHLFQKVLKYLREADSSGLWPTTTPKRQLVMVSTKEE--DATGTQNDNNGSDTIVSPKINTS----------LSAAHMRAKSNKE----------IRSSAYAFVEGQGGASGSFSIGAMPKKQSEQPKGNTLFPELMKAAFELEIALCPEREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYTGGELMVEGEKKDIRYKAIEFNGWKQRHWTLPFHGERFS 511
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4ELS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELS6_9STRA) HSP 1 Score: 221 bits (562), Expect = 4.050e-56 Identity = 172/505 (34.06%), Postives = 248/505 (49.11%), Query Frame = 3
Query: 1158 RCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGE--ENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESA-ARWWEDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP-PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
+C +HNF+ + H + RR+ R Y + P E E+ Y+ LS+SGD F++ Q +V + VA G++ E I C+ L+P P AP +EV Y + R +SP R EGW + + D+++ V + ++W ++ + +G W +VL+P A K +R L+ R K + ++ + + + + G SS++ + +E + AP Y VL LRK D SG WP ++ R +V+V + GD+ + N G++A A A + + + K A SGSF++G P P+ N +FP L RAAFELE L P R S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y GEL+VEG++ DIRY+ LEF+GW QRHWT PF GER+SLVWFTPKGCEG+ G
Sbjct: 370 KCRRYHNFTEKLMAHDYLTSRRVDRIYHRATLKFPMKNCEAPESTTENTTYMVLSMSGDVFLTGQACRLVGVIVALGNGMIDPEFID-CVFDEDYPHLIPTPPAPHYGMVSSEVHYANQEGRTK-----RILSPRMSTRY---KEGWCNETTIRRMKDWQKEVYKFVDSKWKKNGRDESGRLKSEQEWTENVLLPWADKAKRHLEDYKRW------KKNQEQSLTKPNFSLASTKEASGAASSSAPELPPAP-QIEPIDPT--APDIYHDVLSHLRKLDKSGEWPSTSSKRQIVMVSNSAT-GDL---------------NDKNSGPGSLAIACAK------AKRNEQTKSCAYSFVEGQGGA-----------SGSFSVGIMPGGLQKQPKANSMFPDLVRAAFELETKLFPEREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYDGGELMVEGDQHDIRYKALEFDGWKQRHWTMPFNGERFSLVWFTPKGCEGMKG 823
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A448ZRN1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN1_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.050e-55 Identity = 170/499 (34.07%), Postives = 234/499 (46.89%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGAG----WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
+HNF+ + H + RRL R Y + P E+ Y+ LS+SGD F++ Q ++ + VA GL+ E I C+ L+P P AP +EV Y + G + + + EGW++ + D++ V + W+ D+QG W VL+P A K + L+ +R + +D + HD S E S + +E + P Y VL LRK DASG WP ++ R LV+V + G E G+ ++A A + A S A+ SGSF++G P P+ N +FP L +AAF LE L P+R S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y GEL+VEG++ DIRY+ +EF+GW QRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct: 371 YHNFTEKLMAHEYLTYRRLDRIYHRSTLKFPME--SESKMKTTSYMILSMSGDMFLTGQTSRLIGVIVALGNGLIDREFID-CVFDENYPHLVPTPPAPHFGVVSSEVQYANQE--------GKTRRILSARMSDRYTEGWNNEATIRRVKDWQNEVYKYVDSKWKKDGRDEQGRLRSEQEWTEKVLLPWAEKAKEHLE-DYKRWKKKQHQSSHDLSESSAKHDSHTESSYAPESS--------RIPQIEPIDPT--VPEVYKDVLHHLRKLDASGEWPMTSSKRQLVMVSSSD------GVKENGKGTESLA--------------LACLKAKRNELTGSSAYSFAEGQGGA---------------SGSFSVGIMPGGDKKQPKANSMFPDLVKAAFLLETKLFPDREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYGGGELMVEGDKHDIRYKAIEFDGWKQRHWTMPFKGERYSLVWFTPKGCEGMKG 812 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig76.48.1 >prot_P-littoralis_Contig76.48.1 ID=prot_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp MPLHDPKPPTNGDGPTEPTPATTPLPTLPQTTCIFCGREFPTRSSMFRHLback to top mRNA from alignment at P-littoralis_Contig76:113500..117788+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig76.48.1 ID=mRNA_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4289bp|location=Sequence derived from alignment at P-littoralis_Contig76:113500..117788+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig76:113500..117788+ >mRNA_P-littoralis_Contig76.48.1 ID=mRNA_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2394bp|location=Sequence derived from alignment at P-littoralis_Contig76:113500..117788+ (Pylaiella littoralis U1_48)back to top |