mRNA_P-littoralis_Contig76.48.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig76.48.1
Unique NamemRNA_P-littoralis_Contig76.48.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 525/779 (67.39%), Postives = 590/779 (75.74%), Query Frame = 3
Query:  399 PQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPP-------PAPPMTTSDG--GAVGGESAGTFVIKAMGIEVEKGGGGDGDN----------SRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALD-SGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWP-EPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAG--GGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDE-GNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRT-MAG-EESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTGDARFST 2657
            P TTC FC   FPTRS+MFRHLERP  +CPAPRED GEK+LL+VGYD  LM     A  + GE A +TPP       P PP+ TS G   AVGG SA + V+KAMGIEVE+                  SRP GFSQAS+VGSRTCPLLAQE EVSATADTIC++APTTVP EGIR WLD TNAALD S  N + A+RLLGRM VP TFHAEIHAKRRRYEY++PAWMLDETA+ PW   P+G EN+IP LRRLR +G+RPFGHC+G+HDGTRRRCPLWHNFSASALPHSPSSLRRL+RFYAMEV +S     +   AG  G +YVCLSI+GDAFMSQQVRGMVALAVAGARGL+SAE IAA IDPTRQEDLLPVPLAPA PCSLAEVGY+GWQ RLGV G GVCMSPGAEQR C PLEGWSD  SRS GA FRR VL+SAARWWE++ GG GWL+DVL PGA+KL RE+  S+ RAG   D  G+ +  G G  D  G R  SR E    +G  D   LS E+L++L++AP  YAKVL LLR+A ASG WP ST SRSLVI G++ +R D E     GR+++T +AG  +  D+D   A A  A  A+  +  +       +     XXXXXXXXXXXXXXX  SFTLGAFPPPC PPRGN LF  LARAAFELEAALLP RP STTIAVNRNARFKPHVDSG+GAGQS+SLIVGLGDY  GELVVEGEE DIRYRPLEFNGWTQRHWTRPF GERYSLVWFTPKGCEG++GDARFS+
Sbjct:   31 PVTTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLVVGYDSRLM-----AGDKGGEGA-VTPPTSDTYNMPTPPVGTSSGTAAAVGGASAASSVLKAMGIEVERRRDXXXXXXXXXXXQSYCSRPGGFSQASSVGSRTCPLLAQEEEVSATADTICLRAPTTVPQEGIRKWLDDTNAALDNSDGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRCPLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQEDLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDGGVGWLKDVLQPGAVKLGREVQVSDMRAG---DLEGDRSNEGRGEEDGCGGRSGSRDESRRGAG-ADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRAD-EMCSGTGRSKQTDLAGCAKGRDSD-KTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXXSFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGISGDARFSS 797          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA)

HSP 1 Score: 274 bits (701), Expect = 3.000e-75
Identity = 272/801 (33.96%), Postives = 341/801 (42.57%), Query Frame = 3
Query:  411 CIFCGREFPTRSSMFRHLERPSESCPA---------PREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASAVGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWPEPK----------GHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYT-GWQTRLGVD---------------------------GGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWEDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVI-------VGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXX-----------SGSFTLGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPK 2618
            C  C + F TR+++FRHL   +  C A              G KI L+ GY       A AAI                      GA+                        G    P G + AS+  +     LAQE EV+A AD +            +R  L   NA L  G      VR+LG M V   FHAE  A+RRRY+Y++P  +L   A                  G  ++   ++R++    R +G    D  G R  C   HNF AS  P  P + RRL+RF   +            A  G   V LS++ +AF+SQQ R MV L +A ARG +  + I A +D    E +   P APA    LAEVGY+     + G+                                                                       W E++  G+ W+   L      LR  L                          +  + +  G P           LS  E  AL  AP  YA+VLRLLR+ADASG WP S+  R  VI       VG+++E  + +   EA      +  + +    GA  T  A I+                 XXXXXXXXXXXXXXXXXXX            GSF++G  P  C  PRGN LFP L RAAFELE  L+PNR  S+TIA+NR+A+F+PH DSGAG+GQS SLIVGLGDY  GELVVEG E DIRYRPLEFNGWTQRHWT PF GERYSLVWFTPK
Sbjct:    5 CKLCAQPFDTRNALFRHLLDLNTECGAFCASKGMKSTATTRGRKIALLFGYHGVSSDAAVAAIW---------------------GAI-----------------------TGSTEPPDGLTAASSWIASNNRALAQEPEVAAVADVMTFNM--------LRGSLSDVNARLPRG------VRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYG--GTDQRGRRVCC---HNFCASTAPTEPIATRRLFRFKHTD----------SAALRGRACVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALDAQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFGLSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFLQRWR----------------------DSKQLAQSGPPQ------PPLSLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIANGAAAAVGEEDES-EEQVPAEAAAVELLVPAQLATSGPGA--TVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPK 701          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC)

HSP 1 Score: 253 bits (647), Expect = 2.330e-67
Identity = 184/512 (35.94%), Postives = 252/512 (49.22%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG-----EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA----GWLRDVLVPGALKLRRELDA------SNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEE--RGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFP-PPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            +HNF+ S L H   + RRL R Y     R  +         +NA     ++ LS+SGD F++ QV  +V L +A ++G++  ED   C+       L+  P AP       E  Y   +        G C +    +++ +  +GW+D+ +      +++ V   AA  W    ED++G       W ++VL P A++ + +L        S +        GG +                          ++  + S+E  TA+   P+ + KVLR LR AD SG WP +T  R LV+V    E      +  FE+G                      A  A+++V+ + +    + K                    SGSF++GA P   C  P+GN LFP L RAAFELE AL PNR  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GELVVEGE+ DIRYR LEFNGW QRHWT PF GER+SLVWFTPKGCEGV G
Sbjct:  345 YHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVID-EDFCDCVFDEAYPHLVSTPAAPTTGMYAGEAYYMSME--------GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMALGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVLHATTGGAETRA-----------------------LEPPIASIE--TAI---PSLFEKVLRYLRDADKSGFWPSTTPKRQLVMVSTVVEGKSESCDNPFESG----------------------AMPASLSVAHMKARSNKIDKSSAYIYVEGEGGA-------SGSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGVRG 790          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO)

HSP 1 Score: 251 bits (641), Expect = 3.760e-67
Identity = 244/822 (29.68%), Postives = 358/822 (43.55%), Query Frame = 3
Query:  396 LPQTTCIFCGREFPTRSSMFRHLERPSESCPAPREDNG----------EKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPAPPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASA-VGSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFNGKGAVRLLGRMVVPP---TFHAEIHAKRRRYEYVVPAWML--------------------DETAQI------PWPEPKGHENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRC--------PLWHNFSASALPHSPSSLRR----------------LYRFYAMEVFRSP-RGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGA----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            + + TC  CG EFP+RS++FRHL+  S  C +  E  G           K+LL+ GY C L  T +A                                   ++K +           G++ +P   +++ A +G RT  +   E      ++ +  + P+   LE +  W+D+ N  L+        + L+GR  +     TF+AEI    RR EY++P   L                     ET++        +P     + +    R+++    +     + +HD + ++         P     S +      + L+R                 YR       R+  R  GE        ++ LS++GD F+  QV  ++ + +A ARGLV  +D+  C+   +   L+P P AP++     E  Y  W+ ++        +SP    R     EGW+D  +      ++  V E  AR W     D+ G       W   VL P + +  ++L+   +   A+         V   S  E +       PS N   VD T+            PA + KVLR LR+ADASG WP +T  R +V++    +    +  F       ++A     DA G          A N     S   + A+                    SGSF++GA P   C+ P+GN LFP L +AAFELE  L P+R  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GER+SLVWFTPKGCEGV G
Sbjct:    1 MQKATCHGCGEEFPSRSAIFRHLKETSGQCLSKEEYQGYLQYLQEQDRHKVLLLYGY-CGLEGTEAAQ---------------------------------KLLKIV----------QGEDVKPDKINRSYANIGRRTQLVKQDEGTGGVISEVLATRLPSI--LEPVDNWIDRMNTQLEPE-----GIYLIGRHEMKGKGGTFNAEIDVTHRRVEYMLPLDFLYCSNIENMSRDEFFDTLPDFTETSEYVSKVGRDYPTLATVKYLFGLKRKMQSLTTQIIPMDADEHDSSAKKMEREQQSKRPKSQQKSKNGNKPKTNLLKRRRFHNFTPSCMAHEYVAYRRMDRVYHRATIRFDGERRP-----FLVLSLTGDLFLHGQVCRVIGVFLALARGLVD-QDMVECLFDEKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVK-----AVLSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWLTGGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQAS-------LVVSRKSAAEVSELI----PSLNL--VDPTV------------PAVFEKVLRCLREADASGLWPSTTPKRQMVMISSLTDPNATDEDFLP----NSLA-----DAHGK---------AKNNKGQRSSAYIFAEGEGGA---------------SGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGVHG 699          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.830e-64
Identity = 179/537 (33.33%), Postives = 252/537 (46.93%), Query Frame = 3
Query: 1152 RRRCPLWHNFSASALPHSPSSLRRLYRFYAMEVFR-SPRGGG-----------------EENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERG-----DIEGGFEAGRNRRT-----MAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP--PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            RRR   +HNF+ S + H   S RRL R +     R  PR                      N+     ++ LS+S D F++ QV  +V L VA ARGL+  +D   C+       L+P P AP +     +  Y  W+        G   S  + ++      GW+D  +      ++  V + A + W    ++Q    G       W   +L+P A K R+ L    +     G    +D+++ +                     V   ++S   L      P  + +VL LL++AD SG WP +T  R LV+V +  + G     D    F++ +  ++     M  + + D              +  SA + EE                         SGSF++G+ P    P  P+ N LFP L +AAFELE AL P+R  S+TIA+NRNA+F+PH DSG+GAGQS SLIVG+G Y  GELVVEGE+ DIRY+ +EFNGWTQRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct:   65 RRR---YHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLID-KDFVECVFDENYLHLVPTPPAPLIGMYSKDAFYMSWE--------GKAKSVLSPRQTDRYPGGWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHLQDYRQWKSLQGKTPLSDSSISQ--------------------MVSNNIISNSSLDPT--VPKVFQRVLSLLQEADKSGSWPSTTPKRQLVMVSNHVDSGKDGDKDTSNPFQSYQQPKSLSVAHMKAKSNRD--------------IRSSAYEFEE--------------------GQGGASGSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGIRG 533          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS)

HSP 1 Score: 238 bits (608), Expect = 3.090e-62
Identity = 185/514 (35.99%), Postives = 247/514 (48.05%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFR---SPRGG--GEENAAGGGE---------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLE-GWSDNISRSAGADFRRGVLESAARWW------EDQQGGAG--WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            +HNFS + L H   + RRL R Y     R   SP  G   E+ +A   E         ++  S++GD F+ +Q R ++ L +A  RG++ +E I  C+      +L+P P AP+      E  Y  W+ RL        +SP    R C   + GW++    SA   +   ++   A  W      +D +  A   WL DVL P A K R  LD   R   A  +    D  + E                    ++   + S++ +      P  YAKVL  LR AD+SG WP +T  R LV+V        ++    A         ++ ND              +   A   +E                         SGSF++GA P   C  P+GN LFP L +AAFELE AL P R  S+TIA+NRNA+F+PH D+GAGAGQS SLIVGLGDY  GEL+VEG + DIRY P+EFNGW QRHWT PF GER+SLVWFTPKGC+GV G
Sbjct:  352 FHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDSE-IIECMFDEEYANLVPAPPAPSCGLVAGESTYMTWEGRLK-----TILSP----RRCDRYDKGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENYWLDDVLNPWATKTRVILDDYRRWKTAKEESSAIDGTLAE--------------------SLLPPVSSIDTMV-----PELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVA-----MHVAKKKND--------------LRSDAYTFQE--------------------GEGGASGSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGVRG 791          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S2SC44_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SC44_9STRA)

HSP 1 Score: 210 bits (534), Expect = 3.540e-58
Identity = 123/243 (50.62%), Postives = 145/243 (59.67%), Query Frame = 3
Query: 1914 KAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            K P  Y KVL LLRKAD S  WP +T  R LV++   E+                   E+ ND        T   AA+  +  +S  +  A                     SGSF++GA P   C  P+GN LFP L +AAFELE AL PNR  S+TIAVNRNA+F+PHVD+GAGAGQS SLIVG+G Y  GEL+VEG++ DIRY  +EFNGWTQRHWT PF GERYSLVWFTPKGCEGV G
Sbjct:   17 KVPLLYEKVLNLLRKADTSELWPTTTPKRQLVMISTNED-------------------EKEND--------TCLSAALIKAQSNSGTRASA-----------YTFKEGQGGASGSFSVGAMPGVQCEQPKGNTLFPELMKAAFELEIALCPNREPSSTIAVNRNAQFRPHVDNGAGAGQSTSLIVGMGTYVGGELMVEGKKHDIRYEAIEFNGWTQRHWTLPFVGERYSLVWFTPKGCEGVHG 221          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4QKS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKS2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.020e-56
Identity = 167/501 (33.33%), Postives = 238/501 (47.50%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGG---EENAAGGGE--------YVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW----EDQQGGA-----GWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKA----PAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPP-CLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYS 2597
            +HNF+++ + H   + RRL RF+     R    G    EE    G          ++ L+++GD F++ Q R ++AL +A  RG +  EDI  C+      +L+P+   P+         Y  W+ ++        +SP   ++A L   G++D  +  +   F+  V    A  W    ED   G       W  +VL P A+K + +L    +                     E  R  S         N +  M++     +L+      P  + KVL+ LR+AD+SG WP +T  R LV+V  KEE  D  G         T+   + N +          ++A ++ A  ++E                         SGSF++GA P      P+GN LFP L +AAFELE AL P R  S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEGE+ DIRY+ +EFNGW QRHWT PF GER+S
Sbjct:   68 FHNFTSTVMAHEFLAYRRLDRFFHRATVRFDENGAADKEEELPEGSNNAFHSKRPFLALTLTGDLFLNGQARRVIALFLAICRGCID-EDILDCVFDEEYTNLVPIVPLPSFGMYAEGSTYMSWEGKIK-----AILSP---RKADLYDRGFNDEDTIRSVEHFQHDVFREVASAWCRKGEDNVTGRLVSEQKWTEEVLQPWAVKAKEQLQDYRKWK-------------------EAKRLVS-------DSNTETEMVAETLAPSLESVDTSVPHLFQKVLKYLREADSSGLWPTTTPKRQLVMVSTKEE--DATGTQNDNNGSDTIVSPKINTS----------LSAAHMRAKSNKE----------IRSSAYAFVEGQGGASGSFSIGAMPKKQSEQPKGNTLFPELMKAAFELEIALCPEREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYTGGELMVEGEKKDIRYKAIEFNGWKQRHWTLPFHGERFS 511          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A7S4ELS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELS6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.050e-56
Identity = 172/505 (34.06%), Postives = 248/505 (49.11%), Query Frame = 3
Query: 1158 RCPLWHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGE--ENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESA-ARWWEDQQGGAG-------WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPPPCLP-PRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            +C  +HNF+   + H   + RR+ R Y     + P    E  E+      Y+ LS+SGD F++ Q   +V + VA   G++  E I  C+       L+P P AP      +EV Y   + R         +SP    R     EGW +  +     D+++ V +   ++W ++ +  +G       W  +VL+P A K +R L+   R       K   + ++ + +    +   + G  SS++  +      +E +     AP  Y  VL  LRK D SG WP ++  R +V+V +    GD+                + N   G++A A A       +  + + K  A                     SGSF++G  P      P+ N +FP L RAAFELE  L P R  S+TIA+NRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEG++ DIRY+ LEF+GW QRHWT PF GER+SLVWFTPKGCEG+ G
Sbjct:  370 KCRRYHNFTEKLMAHDYLTSRRVDRIYHRATLKFPMKNCEAPESTTENTTYMVLSMSGDVFLTGQACRLVGVIVALGNGMIDPEFID-CVFDEDYPHLIPTPPAPHYGMVSSEVHYANQEGRTK-----RILSPRMSTRY---KEGWCNETTIRRMKDWQKEVYKFVDSKWKKNGRDESGRLKSEQEWTENVLLPWADKAKRHLEDYKRW------KKNQEQSLTKPNFSLASTKEASGAASSSAPELPPAP-QIEPIDPT--APDIYHDVLSHLRKLDKSGEWPSTSSKRQIVMVSNSAT-GDL---------------NDKNSGPGSLAIACAK------AKRNEQTKSCAYSFVEGQGGA-----------SGSFSVGIMPGGLQKQPKANSMFPDLVRAAFELETKLFPEREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYDGGELMVEGDQHDIRYKALEFDGWKQRHWTMPFNGERFSLVWFTPKGCEGMKG 823          
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Match: A0A448ZRN1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.050e-55
Identity = 170/499 (34.07%), Postives = 234/499 (46.89%), Query Frame = 3
Query: 1170 WHNFSASALPHSPSSLRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVALAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQTRLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWWE----DQQGGAG----WLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSHDEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKADASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGAVATATAAIAAVNVSAVDSEEKLVAKDXXXXXXXXXXXXXXXXXXXSGSFTLGAFPP-PCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFKPHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFFGERYSLVWFTPKGCEGVTG 2639
            +HNF+   + H   + RRL R Y     + P     E+      Y+ LS+SGD F++ Q   ++ + VA   GL+  E I  C+       L+P P AP      +EV Y   +        G      + + +    EGW++  +     D++  V +     W+    D+QG       W   VL+P A K +  L+   +R      +  +D +     HD     S   E S         +  +E +      P  Y  VL  LRK DASG WP ++  R LV+V   +      G  E G+   ++A               A + A       S     A+                    SGSF++G  P      P+ N +FP L +AAF LE  L P+R  S+TIAVNRNA+F+PH DSGAGAGQS SLIVGLG Y  GEL+VEG++ DIRY+ +EF+GW QRHWT PF GERYSLVWFTPKGCEG+ G
Sbjct:  371 YHNFTEKLMAHEYLTYRRLDRIYHRSTLKFPME--SESKMKTTSYMILSMSGDMFLTGQTSRLIGVIVALGNGLIDREFID-CVFDENYPHLVPTPPAPHFGVVSSEVQYANQE--------GKTRRILSARMSDRYTEGWNNEATIRRVKDWQNEVYKYVDSKWKKDGRDEQGRLRSEQEWTEKVLLPWAEKAKEHLE-DYKRWKKKQHQSSHDLSESSAKHDSHTESSYAPESS--------RIPQIEPIDPT--VPEVYKDVLHHLRKLDASGEWPMTSSKRQLVMVSSSD------GVKENGKGTESLA--------------LACLKAKRNELTGSSAYSFAEGQGGA---------------SGSFSVGIMPGGDKKQPKANSMFPDLVKAAFLLETKLFPDREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYGGGELMVEGDKHDIRYKAIEFDGWKQRHWTMPFKGERYSLVWFTPKGCEGMKG 812          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI5_ECTSI0.000e+067.39PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A835YK11_9STRA3.000e-7533.96Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
B7FNZ7_PHATC2.330e-6735.94Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JI73_FISSO3.760e-6729.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2Y9F9_9STRA4.830e-6433.33Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8C5S1_THAPS3.090e-6235.99PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A7S2SC44_9STRA3.540e-5850.62Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S4QKS2_9STRA4.020e-5633.33Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4ELS6_9STRA4.050e-5634.06Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZRN1_9STRA2.050e-5534.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:113500..117788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQI5
Preferred namePUS1
PFAMsPseudoU_synth_1
Model size3514
Max annot lvl2759|Eukaryota
KEGG koko:K06173,ko:K20674
KEGG Pathwayko04624,map04624
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000959,GO:0000963,GO:0001522,GO:0002153,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003727,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009982,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0019219,GO:0019222,GO:0030374,GO:0031119,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070525,GO:0070900,GO:0070902,GO:0071704,GO:0080090,GO:0090304,GO:0090646,GO:0097159,GO:0106029,GO:0140053,GO:0140098,GO:0140101,GO:0140110,GO:1900864,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990481,GO:2000112,GO:2001141
Exons3
Evalue0.0
EggNOG OGsCOG0101@1|root,KOG2553@2759|Eukaryota
Ec32 ortholog descriptionPseudouridine synthase
Ec32 orthologEc-01_008790.1
EC5.4.99.12
Descriptionpseudouridine synthase activity
Cds size2394
COG categoryJ
BRITEko00000,ko00001,ko01000,ko01002,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791565.975267-UTR-P-littoralis_Contig76:113499..1138131680791565.975267-UTR-P-littoralis_Contig76:113499..113813Pylaiella littoralis U1_48UTRP-littoralis_Contig76 113500..113813 +
1680791566.0328336-UTR-P-littoralis_Contig76:116982..1177881680791566.0328336-UTR-P-littoralis_Contig76:116982..117788Pylaiella littoralis U1_48UTRP-littoralis_Contig76 116983..117788 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791565.995044-CDS-P-littoralis_Contig76:113813..1143131680791565.995044-CDS-P-littoralis_Contig76:113813..114313Pylaiella littoralis U1_48CDSP-littoralis_Contig76 113814..114313 +
1680791566.0062718-CDS-P-littoralis_Contig76:114780..1149401680791566.0062718-CDS-P-littoralis_Contig76:114780..114940Pylaiella littoralis U1_48CDSP-littoralis_Contig76 114781..114940 +
1680791566.0228157-CDS-P-littoralis_Contig76:115248..1169821680791566.0228157-CDS-P-littoralis_Contig76:115248..116982Pylaiella littoralis U1_48CDSP-littoralis_Contig76 115249..116982 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.48.1prot_P-littoralis_Contig76.48.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig76 113814..116982 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig76.48.1

>prot_P-littoralis_Contig76.48.1 ID=prot_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp
MPLHDPKPPTNGDGPTEPTPATTPLPTLPQTTCIFCGREFPTRSSMFRHL
ERPSESCPAPREDNGEKILLIVGYDCYLMKTASAAIQQAGEVATLTPPPA
PPMTTSDGGAVGGESAGTFVIKAMGIEVEKGGGGDGDNSRPSGFSQASAV
GSRTCPLLAQEAEVSATADTICIKAPTTVPLEGIRAWLDKTNAALDSGFN
GKGAVRLLGRMVVPPTFHAEIHAKRRRYEYVVPAWMLDETAQIPWPEPKG
HENIIPFLRRLRGKGMRPFGHCSGDHDGTRRRCPLWHNFSASALPHSPSS
LRRLYRFYAMEVFRSPRGGGEENAAGGGEYVCLSISGDAFMSQQVRGMVA
LAVAGARGLVSAEDIAACIDPTRQEDLLPVPLAPALPCSLAEVGYTGWQT
RLGVDGGGVCMSPGAEQRACLPLEGWSDNISRSAGADFRRGVLESAARWW
EDQQGGAGWLRDVLVPGALKLRRELDASNRRAGAAGDKGGNDAAVGEGSH
DEGNRCSSRGEPSSNSGNVDRTMLSVEELTALQKAPAAYAKVLRLLRKAD
ASGCWPYSTVSRSLVIVGDKEERGDIEGGFEAGRNRRTMAGEESNDADGA
VATATAAIAAVNVSAVDSEEKLVAKDDGQQQPTAVQQQQQRGGGGSGSFT
LGAFPPPCLPPRGNHLFPALARAAFELEAALLPNRPASTTIAVNRNARFK
PHVDSGAGAGQSKSLIVGLGDYKCGELVVEGEEVDIRYRPLEFNGWTQRH
WTRPFFGERYSLVWFTPKGCEGVTGDARFSTTPTPAAAAVGGTGGER*
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mRNA from alignment at P-littoralis_Contig76:113500..117788+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig76.48.1 ID=mRNA_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4289bp|location=Sequence derived from alignment at P-littoralis_Contig76:113500..117788+ (Pylaiella littoralis U1_48)
AGGAGTTTCGTACTTCGTCCGTACGCTTGCGGTGCCACACGCGTGAGATA CTTCAGCTTGTGAGCCTGTGCTACAACGTTAGAGAAAGTTTGAGGTGTAT GTCTGAGTTCGCTTCAGGCGTTCATACTGCTGAGACCAGGAGAGGAGACC AGCCCTTTGATTGTTGCAACAATCAGCCTCCGTCGACACATCACCGGAAA GCGCCCAGAAGCGTCCAGCTGTTACAGATAGCATCACATACGGCATCCAT CTTGCACTGCACAGAGAAAGCGGTGATTTAAGCGCCGCCTCTTTGGAGAA CGAGTTGGCAAAACATGCCCCTCCACGATCCCAAGCCCCCTACAAATGGA GATGGACCAACCGAACCGACCCCAGCGACGACACCGCTGCCTACTCTCCC TCAAACAACCTGCATCTTTTGCGGCCGAGAGTTCCCTACCAGGAGCTCAA TGTTCCGCCACCTTGAGAGGCCCTCCGAGAGCTGCCCGGCGCCTCGCGAG GACAACGGCGAGAAAATTCTCCTCATTGTCGGCTACGACTGCTATCTGAT GAAGACAGCTTCCGCAGCAATACAACAAGCAGGAGAGGTAGCAACTCTCA CGCCACCACCGGCACCCCCAATGACGACCTCAGACGGGGGGGCTGTCGGA GGCGAAAGCGCGGGAACGTTTGTGATTAAGGCCATGGGAATCGAAGTGGA GAAGGGAGGGGGTGGGGATGGAGACAACAGTCGACCCAGCGGGTTCAGCC AGGCCTCCGCCGTTGGCTCCCGTACCTGTCCTCTGTTGGCGCAGGAGGCC GAAGTCAGCGCGACGTGAGTGTTTTTTTAAACTTCGCCTGGTTGACGCCA GCAGTCTCTGAAAATCTTACAGTGCAGTGACTCGTCGCACTTAACTGGTG ACACTCTCATCAAAAAGACCTGGCACAAGAAGTGTAACGAACAAAAGGCT GCAGCGGTTTTGTGGCGCTTGTCCCGGTGTCGTGGATGTATTGCACAGCA GTGGGAACGACAGAACAGCAGTAGCGGTTTCCATCTGGTGCTGTGTGAAA TCCATTGAAAGAGGTATCGAGCGCCTCACGAGGGATGCCGGGCCGCCGTA AGATTCGTTCACACGATTACCCGCATACGAAATAGGTAGAATTGAACCAA CTGGTACCTGGAAACTTTCAAATCACCCATGTGCTGCTCGCCTTTCAAAT CACCCATATGCTGCTGGCCTACCCCCCCCCCCCCGCCCGGCGTCAACAAC TCGCGCGCTCCTTTACCTTCCACGCGACCAGGGCCGACACCATCTGTATC AAAGCACCGACAACGGTGCCCTTGGAGGGTATTCGAGCGTGGCTCGACAA AACAAACGCCGCTCTCGACAGCGGCTTCAATGGAAAGGGGGCGGTGCGCC TGTTGGGGCGGATGGTTGTCCCCCCAACCTTCCACGCAGAGGTGATGTAA ACAACTTCGCAAGATTTTGAATCCTTTGATCCCGTCTACGGTACATCCTG CTGTCGCAATGGGTATGCTTGTAGAGGAGAAGACCAGATCGGGAACGAGG CGGAGCAAATCGGTGCCTTTTGAGCTCTGAAAGAAGTGATCAAAAGTCAG GGTGCAGCAGTCGGTCTTGAAACGTCGAATGAAAATACCCTATTCAATCC GGGGGCTCACCCTGCTGCTGCTGCTGCTGCTACGACTATGCAAAACGGAT GCCGCTAGAAGATTTCTAACGTACGTCGATGATTTACTATCCCCGACAGA TCCACGCCAAAAGGAGGCGGTACGAGTACGTTGTTCCTGCGTGGATGCTT GACGAGACGGCACAAATTCCGTGGCCTGAACCCAAGGGACACGAGAATAT CATCCCATTTTTGAGACGCCTCCGAGGGAAAGGAATGAGGCCCTTCGGAC ACTGTAGCGGCGACCACGACGGTACACGGCGGCGTTGCCCGCTCTGGCAC AATTTCAGCGCGAGCGCGCTCCCCCACAGCCCTTCCTCCCTCCGCCGCCT TTACCGCTTCTACGCAATGGAGGTTTTTCGATCACCACGAGGGGGCGGCG AGGAAAATGCCGCCGGCGGCGGGGAATACGTCTGTCTCTCTATCAGCGGT GACGCATTCATGAGCCAGCAGGTGAGGGGTATGGTAGCCCTCGCCGTGGC GGGGGCGAGAGGCCTCGTCTCGGCAGAGGACATCGCGGCGTGCATTGATC CGACGCGGCAGGAGGACCTGTTGCCGGTGCCTCTGGCTCCCGCGCTCCCG TGCTCGCTGGCCGAGGTGGGCTACACCGGGTGGCAGACAAGGCTCGGCGT CGACGGGGGGGGGGTCTGCATGTCACCCGGGGCCGAACAGCGAGCGTGCC TGCCACTCGAGGGTTGGAGCGACAATATTTCAAGGTCTGCGGGTGCAGAT TTTCGGAGAGGCGTTCTCGAAAGCGCTGCGCGGTGGTGGGAGGACCAGCA GGGCGGAGCGGGCTGGCTGCGGGATGTTCTGGTGCCGGGGGCGCTCAAGC TCCGGCGAGAGCTGGACGCCTCGAACAGACGAGCGGGAGCAGCGGGGGAC AAAGGCGGCAATGATGCGGCTGTGGGTGAGGGCAGCCACGACGAGGGCAA TAGGTGCAGCTCGAGAGGCGAGCCTAGTAGTAATAGTGGTAATGTGGATA GGACCATGTTGTCCGTTGAAGAGCTCACCGCGCTGCAGAAGGCGCCGGCC GCGTATGCGAAGGTTTTGCGGCTATTAAGGAAAGCAGACGCTTCGGGATG CTGGCCTTACAGCACGGTTTCGCGCAGTTTGGTGATCGTAGGCGACAAGG AGGAACGGGGAGACATCGAGGGCGGCTTTGAGGCTGGGCGCAACAGGCGG ACAATGGCAGGCGAAGAAAGCAACGACGCCGATGGTGCAGTTGCAACAGC AACAGCAGCAATAGCAGCAGTGAACGTGAGTGCTGTTGACAGCGAGGAGA AGCTGGTGGCAAAAGACGATGGACAGCAACAACCAACAGCAGTGCAGCAA CAACAGCAACGCGGGGGTGGCGGGTCCGGTTCGTTCACCCTCGGCGCCTT CCCCCCGCCCTGCCTGCCGCCGCGTGGCAACCACTTGTTCCCGGCGCTCG CAAGAGCGGCGTTCGAGCTGGAGGCCGCCTTATTGCCGAATCGGCCGGCG TCCACTACCATCGCCGTCAACAGGAACGCGAGGTTCAAGCCGCACGTGGA TAGTGGGGCGGGCGCCGGTCAGAGCAAGAGCCTGATAGTGGGCCTCGGCG ACTACAAGTGCGGAGAGCTTGTCGTCGAGGGCGAGGAGGTGGACATCCGA TACCGGCCGCTGGAGTTCAACGGGTGGACTCAGAGGCACTGGACGAGACC GTTTTTTGGCGAGAGGTACTCGCTTGTGTGGTTCACTCCCAAAGGCTGCG AGGGGGTCACTGGTGACGCGCGATTTTCGACAACTCCTACCCCTGCTGCT GCTGCTGTGGGTGGCACTGGAGGGGAGCGGTGACTGGGGAGATGGACTCG AGCATTGCACATTGCAGCGTTGTTAGTTTCCAATATTGAAACCTTTACCC CGGTCGGCCGTAGTTATGACAGAATTATGGAGGTATTTGGAGTATGGAGG TATGTGCCGTTTGAAAAATGTTTTATTGATATGTTGGGGGGGATGTCTAC CGAACAGCTGTTTGTTGTCATGTGTAATATTGTCAGCCATGTGGTATAAA TAAGTGTAGGCAGGAGGAATTCGACCCAACCGCAGCCTGGTTTTGATGTA TGATAGCCATGCGCGTAATTATGAAGTTTTCAAGGACAAGGGATAAGGAT CCTCGCAATCCTACCGGGTTTCTAGAGTTCTAATTTCCGGCTCAACTTGC CGGAATCCTTGTGTCGGGCGAGAGTACGTAGTAGCGAAGGGGATGGCCCA AAGTTGGCGCCGAGGCGTGCATGCGAACGTGCAACCGAAACAAGTGGAGG CGCAACTACAACACATGACCGGAAATATTGTTGCTGCACACGTAGCGTGT GGGCCGAATGTTGTTGTGGTTCAGCCGCGCGTTATATTTCGGTTTGTCCT CGACCCTGCTGACAGGAGGCGTATGCACACATACATGTACATCGCGCATG GTCGTGTAAGATGGGGGCACACCTTGCCAAGTTGTGCCGGCGCAGTATCG TCCGTCGTGTACGCAGAGACAGTGTGAGGGCAAAACCAGGGGCCCGATCC GTGTCACCACAGCGCACTGTTGGGTGCTTCATCGGTAGCCGGCCGAAGCT CACACGTTCGTAGAACCGTCACTCGGAAAATGAAGTACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig76:113500..117788+

>mRNA_P-littoralis_Contig76.48.1 ID=mRNA_P-littoralis_Contig76.48.1|Name=mRNA_P-littoralis_Contig76.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2394bp|location=Sequence derived from alignment at P-littoralis_Contig76:113500..117788+ (Pylaiella littoralis U1_48)
ATGCCCCTCCACGATCCCAAGCCCCCTACAAATGGAGATGGACCAACCGA
ACCGACCCCAGCGACGACACCGCTGCCTACTCTCCCTCAAACAACCTGCA
TCTTTTGCGGCCGAGAGTTCCCTACCAGGAGCTCAATGTTCCGCCACCTT
GAGAGGCCCTCCGAGAGCTGCCCGGCGCCTCGCGAGGACAACGGCGAGAA
AATTCTCCTCATTGTCGGCTACGACTGCTATCTGATGAAGACAGCTTCCG
CAGCAATACAACAAGCAGGAGAGGTAGCAACTCTCACGCCACCACCGGCA
CCCCCAATGACGACCTCAGACGGGGGGGCTGTCGGAGGCGAAAGCGCGGG
AACGTTTGTGATTAAGGCCATGGGAATCGAAGTGGAGAAGGGAGGGGGTG
GGGATGGAGACAACAGTCGACCCAGCGGGTTCAGCCAGGCCTCCGCCGTT
GGCTCCCGTACCTGTCCTCTGTTGGCGCAGGAGGCCGAAGTCAGCGCGAC
GGCCGACACCATCTGTATCAAAGCACCGACAACGGTGCCCTTGGAGGGTA
TTCGAGCGTGGCTCGACAAAACAAACGCCGCTCTCGACAGCGGCTTCAAT
GGAAAGGGGGCGGTGCGCCTGTTGGGGCGGATGGTTGTCCCCCCAACCTT
CCACGCAGAGATCCACGCCAAAAGGAGGCGGTACGAGTACGTTGTTCCTG
CGTGGATGCTTGACGAGACGGCACAAATTCCGTGGCCTGAACCCAAGGGA
CACGAGAATATCATCCCATTTTTGAGACGCCTCCGAGGGAAAGGAATGAG
GCCCTTCGGACACTGTAGCGGCGACCACGACGGTACACGGCGGCGTTGCC
CGCTCTGGCACAATTTCAGCGCGAGCGCGCTCCCCCACAGCCCTTCCTCC
CTCCGCCGCCTTTACCGCTTCTACGCAATGGAGGTTTTTCGATCACCACG
AGGGGGCGGCGAGGAAAATGCCGCCGGCGGCGGGGAATACGTCTGTCTCT
CTATCAGCGGTGACGCATTCATGAGCCAGCAGGTGAGGGGTATGGTAGCC
CTCGCCGTGGCGGGGGCGAGAGGCCTCGTCTCGGCAGAGGACATCGCGGC
GTGCATTGATCCGACGCGGCAGGAGGACCTGTTGCCGGTGCCTCTGGCTC
CCGCGCTCCCGTGCTCGCTGGCCGAGGTGGGCTACACCGGGTGGCAGACA
AGGCTCGGCGTCGACGGGGGGGGGGTCTGCATGTCACCCGGGGCCGAACA
GCGAGCGTGCCTGCCACTCGAGGGTTGGAGCGACAATATTTCAAGGTCTG
CGGGTGCAGATTTTCGGAGAGGCGTTCTCGAAAGCGCTGCGCGGTGGTGG
GAGGACCAGCAGGGCGGAGCGGGCTGGCTGCGGGATGTTCTGGTGCCGGG
GGCGCTCAAGCTCCGGCGAGAGCTGGACGCCTCGAACAGACGAGCGGGAG
CAGCGGGGGACAAAGGCGGCAATGATGCGGCTGTGGGTGAGGGCAGCCAC
GACGAGGGCAATAGGTGCAGCTCGAGAGGCGAGCCTAGTAGTAATAGTGG
TAATGTGGATAGGACCATGTTGTCCGTTGAAGAGCTCACCGCGCTGCAGA
AGGCGCCGGCCGCGTATGCGAAGGTTTTGCGGCTATTAAGGAAAGCAGAC
GCTTCGGGATGCTGGCCTTACAGCACGGTTTCGCGCAGTTTGGTGATCGT
AGGCGACAAGGAGGAACGGGGAGACATCGAGGGCGGCTTTGAGGCTGGGC
GCAACAGGCGGACAATGGCAGGCGAAGAAAGCAACGACGCCGATGGTGCA
GTTGCAACAGCAACAGCAGCAATAGCAGCAGTGAACGTGAGTGCTGTTGA
CAGCGAGGAGAAGCTGGTGGCAAAAGACGATGGACAGCAACAACCAACAG
CAGTGCAGCAACAACAGCAACGCGGGGGTGGCGGGTCCGGTTCGTTCACC
CTCGGCGCCTTCCCCCCGCCCTGCCTGCCGCCGCGTGGCAACCACTTGTT
CCCGGCGCTCGCAAGAGCGGCGTTCGAGCTGGAGGCCGCCTTATTGCCGA
ATCGGCCGGCGTCCACTACCATCGCCGTCAACAGGAACGCGAGGTTCAAG
CCGCACGTGGATAGTGGGGCGGGCGCCGGTCAGAGCAAGAGCCTGATAGT
GGGCCTCGGCGACTACAAGTGCGGAGAGCTTGTCGTCGAGGGCGAGGAGG
TGGACATCCGATACCGGCCGCTGGAGTTCAACGGGTGGACTCAGAGGCAC
TGGACGAGACCGTTTTTTGGCGAGAGGTACTCGCTTGTGTGGTTCACTCC
CAAAGGCTGCGAGGGGGTCACTGGTGACGCGCGATTTTCGACAACTCCTA
CCCCTGCTGCTGCTGCTGTGGGTGGCACTGGAGGGGAGCGGTGA
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