prot_P-littoralis_Contig76.47.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.47.4
Unique Nameprot_P-littoralis_Contig76.47.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length315
Homology
BLAST of mRNA_P-littoralis_Contig76.47.4 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 6.570e-78
Identity = 145/213 (68.08%), Postives = 162/213 (76.06%), Query Frame = 0
Query:   83 MTDENGDVGINPGMSEDDDSDDEVSLLVVVEDELQTALDRAGISIKAGAEGGPVEVSVLSEDVSTFLVFAPEGEYLGAKVTGFVPKEDGGLSALEMNGQLVEGDVLTHLNGSNARLLNFSDILKACRGPERGGLPRPLVMKFSRTEALSAPSSPVSSSPPG-TPAAGRVAEDAGANKADG-------------GTQSLLADLDEFMGGLGLPG 281
            M D  G+VG++P M  DDDSDDEVSLLVV EDEL T L+ AGI +K  AEG  VEVSVLSEDVSTFL+FAPE EYLGAKVTGFVP+EDGGLSALEM+GQL+EGDVLTHLNGSNARLL+F+DILKACRGP+RGGLPRPLVMKFSR+EALS P+SP        T   G+ A  A  +K D              G  SLLADLD+FMGGL LPG
Sbjct:    1 MEDGKGNVGMDPDM--DDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAPXXXXXXTAERGQAA--AVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPG 209          
BLAST of mRNA_P-littoralis_Contig76.47.4 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.750e-71
Identity = 144/212 (67.92%), Postives = 159/212 (75.00%), Query Frame = 0
Query:   83 MTDENGDVGINPGMSEDDDSDDEVSLLVVVEDELQTALDRAGISIKAGAEGGPVEVSVLSEDVSTFLVFAPEGEYLGAKVTGFVPKEDGGLSALEMNGQLVEGDVLTHLNGSNARLLNFSDILKACRGPERGGLPRPLVMKFSRTEALSAPSSPVSSSPPGTPAAGRVAEDAGANKADG-------------GTQSLLADLDEFMGGLGLPG 281
            M D  GDVG++P M  DDDSDDEVSLLVV EDEL T L+ AGI +K   EG  VEVSVLSEDVSTFL+FAPE EYLGAKVTGFVP+EDGGLSALEM+GQL+EGDVLTHLNGSNARLL+F+DILKACRGP+RGGLPRPLVMKFSR+EALS P+SP         A  R    A  +K D              G  SLLADLD+FMGGL LPG
Sbjct:    1 MEDGKGDVGVDPDM--DDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDKEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAXXXXXXXTAE-RGQASAATSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPG 209          
BLAST of mRNA_P-littoralis_Contig76.47.4 vs. uniprot
Match: D7FQI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI6_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.140e-13
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MAPNVNVLLAKHSDRELVVGKGVALTANVTSSDKVIIEGHFQGNIETGTFVLAE 54
            M    +VL AKH +R LVVGKGV LTANVTS DKV++EG+FQGNI+TGTFVL+E
Sbjct:   82 MPDKEDVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIKTGTFVLSE 135          
BLAST of mRNA_P-littoralis_Contig76.47.4 vs. uniprot
Match: A0A6H5JYZ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ3_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.340e-13
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 MAPNVNVLLAKHSDRELVVGKGVALTANVTSSDKVIIEGHFQGNIETGTFVLAE 54
            M     VL AKH +R LVVGKGV LTANVTS DKV++EG+FQGNIETGTFVL+E
Sbjct:  208 MPAEEGVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIETGTFVLSE 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.47.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQI4_ECTSI6.570e-7868.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZQ7_9PHAE1.750e-7167.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI6_ECTSI1.140e-1370.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYZ3_9PHAE2.340e-1372.22Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:100843..137924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.47.4mRNA_P-littoralis_Contig76.47.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 100843..138431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.47.4 ID=prot_P-littoralis_Contig76.47.4|Name=mRNA_P-littoralis_Contig76.47.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=315bp
MAPNVNVLLAKHSDRELVVGKGVALTANVTSSDKVIIEGHFQGNIETGTF
VLAEEQTRQDRQIQVAPVEPAQLKRQCVTAVPMTDENGDVGINPGMSEDD
DSDDEVSLLVVVEDELQTALDRAGISIKAGAEGGPVEVSVLSEDVSTFLV
FAPEGEYLGAKVTGFVPKEDGGLSALEMNGQLVEGDVLTHLNGSNARLLN
FSDILKACRGPERGGLPRPLVMKFSRTEALSAPSSPVSSSPPGTPAAGRV
AEDAGANKADGGTQSLLADLDEFMGGLGLPGFASGAASASASAPAASAAS
GTRGSDTVAAAVVAA
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