prot_P-littoralis_Contig76.94.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.94.1
Unique Nameprot_P-littoralis_Contig76.94.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length327
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig76.94.1 vs. uniprot
Match: D7FQJ2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ2_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.590e-55
Identity = 94/109 (86.24%), Postives = 102/109 (93.58%), Query Frame = 0 
Query:    1 IKKKEELIIVDTLLEEGLNDGDLPHLCLDKTLLMNSGHDAFGPKDLDDVLTSVRRAKRKLNKLSVMFNGTGGQGIGSFIAKDSTVREVTLLCERLSNDSVQSLAEALGT 109
            IKKK ELI+VDTLLEEGLNDGDLPHLCLDKTLLM SGHD  GPKDL+DVLTSVRR KRKLNKLSVMFNGTGGQGIG+FIAKD++VREVT+LCE LS+DS+QSLAEAL T
Sbjct:   23 IKKKGELIVVDTLLEEGLNDGDLPHLCLDKTLLMGSGHDTLGPKDLEDVLTSVRRTKRKLNKLSVMFNGTGGQGIGNFIAKDTSVREVTVLCEDLSDDSIQSLAEALET 131
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQJ2_ECTSI2.590e-5586.24Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 222..249
e-value: 0.26
score: 20.3
coord: 138..165
e-value: 0.42
score: 19.7
coord: 250..277
e-value: 0.033
score: 23.3
coord: 166..193
e-value: 0.11
score: 21.5
coord: 278..305
e-value: 19.0
score: 8.1
coord: 194..221
e-value: 0.039
score: 23.1
NoneNo IPR availablePANTHERPTHR24107YNEIN REGULATORY COMPLEX SUBUNIT 5coord: 144..298
coord: 94..222
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 50..299
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 38..222
e-value: 8.6E-34
score: 118.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 223..316
e-value: 5.7E-17
score: 63.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 194..216
e-value: 0.37
score: 11.0
coord: 250..272
e-value: 0.0015
score: 18.5
coord: 225..244
e-value: 0.07
score: 13.3
coord: 166..188
e-value: 1.8E-6
score: 27.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:214770..221185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.94.1mRNA_P-littoralis_Contig76.94.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 214770..221185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.94.1 ID=prot_P-littoralis_Contig76.94.1|Name=mRNA_P-littoralis_Contig76.94.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
IKKKEELIIVDTLLEEGLNDGDLPHLCLDKTLLMNSGHDAFGPKDLDDVL
TSVRRAKRKLNKLSVMFNGTGGQGIGSFIAKDSTVREVTLLCERLSNDSV
QSLAEALGTNRTVTKILLGGKELQDHAAGNLGRALKATSSLQHLTLFNCG
FRDIGAELLASGLSANTTLRRLDLTHCGIGGDGAAAISRAVQRHPTLAYL
NLKNNDVGARGSAALADALRGNFVVLELILGSNCVGNGGASALASAISVN
TTLAYLDLGANGISDNGGVAFAEGLARNASLRHLDLRTNAIGQDTCERVR
VGWSERNAKRSMQLGQPWHDGLSLPF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt