prot_P-littoralis_Contig759.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig759.10.1
Unique Nameprot_P-littoralis_Contig759.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length193
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig759.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 177..193
e-value: 0.0012
score: 28.2
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 177..192
e-value: 1.2E-4
score: 22.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 178..192
score: 9.702167
NoneNo IPR availableGENE3D4.10.60.10coord: 135..193
e-value: 5.0E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..169
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 174..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig759contigP-littoralis_Contig759:112010..112588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig759.10.1mRNA_P-littoralis_Contig759.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig759 112009..112588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig759.10.1 ID=prot_P-littoralis_Contig759.10.1|Name=mRNA_P-littoralis_Contig759.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp
WYSKRTIGEQNELRKRLANFKIPKGSNPVEQLQVAEDLGAEMKEAGIPVE
DQQIYSTFVSALPFAEYHLEIRELGRETVLQREQIVNLVRPQYELLRRNK
KSSSSDYALITGGGRGGGGWRGRGGAKRGGRGGSRGGGHGNRGSSNGGKK
PGGSGVAADTKSGAAADTETSSAKVPVCWNCHERGHFQRDCKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf