mRNA_P-littoralis_Contig757.37.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A6H5JJY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY2_9PHAE) HSP 1 Score: 130 bits (326), Expect = 4.380e-30 Identity = 92/157 (58.60%), Postives = 101/157 (64.33%), Query Frame = 2
Query: 806 SKSSSLLPSVDDLFSSTAGPDFLTAPGAGEEFVIKAMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDVETG-SGGAAGLKKPKGGAVGPAGPPADRKXXXXGKDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
S SLLPSV DLFSSTAGPDFL APGAG++F++KAMK XXXXXXXXXXX RDV G G A G+KKPKGG D++ GK+ K+SAKDKVKGQRLKGQSGIGSDFR WKSDLEMTMRQ YD
Sbjct: 114 SGGGSLLPSVSDLFSSTAGPDFLNAPGAGQDFIVKAMKKEKKKQTAAEATTGDPTAXXXXXXXXXXXGATAKR-ERDVAAGVRGTAVGVKKPKGGXXXXXXXXVDKRKAAGGKE----KISAKDKVKGQRLKGQSGIGSDFRTWKSDLEMTMRQQYD 265
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: D7G8J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J9_ECTSI) HSP 1 Score: 110 bits (274), Expect = 6.190e-25 Identity = 59/82 (71.95%), Postives = 64/82 (78.05%), Query Frame = 2
Query: 1031 RDVETGSGGAA-GLKKPKGGAVGPAGPPADRKXXXXGKDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
RDV G GG A G+KKPKGGA GPAGPP D++ K+ K+SAKDKVKGQRLKGQSGIGSDFR WKSDLEMTMRQ YD
Sbjct: 34 RDVAAGVGGTAVGVKKPKGGAAGPAGPPVDKRKAAGDKE----KISAKDKVKGQRLKGQSGIGSDFRTWKSDLEMTMRQQYD 111
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A7S2W639_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W639_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.890e-9 Identity = 56/151 (37.09%), Postives = 70/151 (46.36%), Query Frame = 2
Query: 821 LLPSVDDLFSSTAGPDFLTAPGAGEEFVIKAMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDVETGSGGAAGLKKPKGGAVGPAGPPADRKXXXXGKDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
LLPSV D+F+ST GP FL P EEF + MK R E + AA GGA +G P K K G +K++ K++VK QRL+GQSGIG+DFR WK+D EM MRQ +D
Sbjct: 19 LLPSVADVFASTDGPAFLAQPS--EEFSVSPMKKSRSQPQPKKEPASHSASSKP----------------RGAEATAXXAA-----PGGAS--SGRPEASKVSDAQKAGTKDKLNRKERVKMQRLRGQSGIGADFRSWKTDEEMRMRQQFD 144
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A1V9YGD8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGD8_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.410e-9 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2
Query: 1139 KDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
KDG NKVS KD+VK QRL+GQSGIGSDFR WKS+ EM +RQ YD
Sbjct: 140 KDG--NKVSGKDRVKAQRLRGQSGIGSDFRGWKSETEMQLRQQYD 182
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A024UJC6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJC6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.880e-8 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 2
Query: 1139 KDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
K G +K S KD+VK QRLKGQSGIGSDF+ WKS+ EM MRQ YD
Sbjct: 134 KGGDGDKTSGKDRVKQQRLKGQSGIGSDFKTWKSETEMKMRQGYD 178
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: T0Q9L0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q9L0_SAPDV) HSP 1 Score: 65.5 bits (158), Expect = 2.080e-8 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 2
Query: 1151 DNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
D+K S KD+VK QRLKGQSGIGSDFR WKS+ EM +RQ YD
Sbjct: 159 DDKPSGKDRVKAQRLKGQSGIGSDFRGWKSETEMQLRQQYD 199
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A7S2FM24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM24_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.330e-8 Identity = 49/157 (31.21%), Postives = 69/157 (43.95%), Query Frame = 2
Query: 803 ASKSSSLLPSVDDLFSSTAGPDFLTAPGAGEEFVIKAMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDVETGSGGAAGLKKPKGGAVGPAGPPADRKXXXXGKDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
A +S LLPSV+DLF+ T+ P FL P + F + MK + + S P+ P + +K G++ K+ K K++VK QR+KGQ+GIG DFRVW+S+ EM MRQ YD
Sbjct: 62 AKTASQLLPSVNDLFAGTSDPSFLAVPTKEDSFTVAPMKKRKLGGLGSNESAP------------------------EKKNDSVKRKSHAPPRAAPT----PQSVKKHVPSGRERKE-KPDRKERVKQQRMKGQAGIGEDFRVWRSETEMAMRQQYD 189
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A6G0WZM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZM1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.900e-8 Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 2
Query: 1145 GKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
G +K S K++VK QRLKGQSGIGSDFR WKSD EM MRQ +D
Sbjct: 127 GTTDKSSGKERVKQQRLKGQSGIGSDFRTWKSDTEMKMRQEFD 169
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A7S3XNJ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ5_HETAK) HSP 1 Score: 63.9 bits (154), Expect = 8.800e-8 Identity = 51/150 (34.00%), Postives = 66/150 (44.00%), Query Frame = 2
Query: 824 LPSVDDLFSSTAGPDFLTAPGAGEEFVIKAMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDVETGSGGAAGLKKPKGGAVGPAGPPADRKXXXXGKDGKDNKVSAKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
LPSVDDLF+ST+GPDFL++ EF+ ++K T +K + A P D+K K SAKD+VK QRLKGQ+GIG DFR WK++ EM MRQ +D
Sbjct: 78 LPSVDDLFASTSGPDFLSS-NVSREFIAPSLKRKSLAKDPEEVARQKLEKKKKVYSATAASGV--------TSTEQKAIKFNQKEEKKASSAPNPFMDKKEKEA------RKQSAKDRVKNQRLKGQAGIGEDFRQWKTEEEMRMRQQFD 212
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Match: A0A024FU73_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FU73_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.540e-7 Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 2
Query: 1166 AKDKVKGQRLKGQSGIGSDFRVWKSDLEMTMRQHYD 1273
AKDKV+ QRLKGQSGIGSDFR WKSD EM MRQ YD
Sbjct: 349 AKDKVRQQRLKGQSGIGSDFRTWKSDAEMVMRQQYD 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig757.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig757.37.1 >prot_P-littoralis_Contig757.37.1 ID=prot_P-littoralis_Contig757.37.1|Name=mRNA_P-littoralis_Contig757.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp MSLAGLVGGYGSDDDSDDSGNSKSPSSASSSKNKNYDGDDDVRRGGGEAGback to top mRNA from alignment at P-littoralis_Contig757:95518..100654- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig757.37.1 ID=mRNA_P-littoralis_Contig757.37.1|Name=mRNA_P-littoralis_Contig757.37.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5137bp|location=Sequence derived from alignment at P-littoralis_Contig757:95518..100654- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig757:95518..100654- >mRNA_P-littoralis_Contig757.37.1 ID=mRNA_P-littoralis_Contig757.37.1|Name=mRNA_P-littoralis_Contig757.37.1|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig757:95518..100654- (Pylaiella littoralis U1_48)back to top |