mRNA_P-littoralis_Contig757.14.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE) HSP 1 Score: 144 bits (362), Expect = 6.710e-41 Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 31 MMAHLDVGGLVLDCCGSTRNAVCRLLTERGFRVQTNDINSRQARQT-IACTKYAY----GQGDNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVLPRAGYRGRKCNVPQAWFMWY 444
++ ++ + G VLD CGS +A+ +L V TND N R T + T + RPDW+VTSPPY NAF+IL +AL V VGV FKLRLSFLEP+KTRG+WLKDNP S +VLPRA Y GR C+ +AWF+W+
Sbjct: 18 LLLNVKLAGGVLDACGSASDAIKVVLEAHSLNVSTNDFNPRLTADTHLDATSEEFTAMFSTEGQRPDWIVTSPPYGNAFSILVRALGVVRVGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGRVCSSTEAWFIWH 160
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 3.500e-16 Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 1
Query: 31 MMAHLDVGGLVLDCCGSTRNAVCRLLTERGFRVQTNDINSR------------QARQTIACTKYAYGQGDNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVL 384
++ +++ G VLD CG +A+ L +V TNDI++R A + + RPDWV+TSPPYK A +K AL +A GV KL LSFLEP RG WL+ NP ++ +
Sbjct: 93 LLGAVELEGCVLDMCGGPGDAIATRLGAT-CKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: A0A433N1N0_CHLFR (Uncharacterized protein n=1 Tax=Chlorogloeopsis fritschii PCC 6912 TaxID=211165 RepID=A0A433N1N0_CHLFR) HSP 1 Score: 72.4 bits (176), Expect = 9.110e-13 Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 1
Query: 7 HPLRQVIDMMAHLDVGGLVLDCCGSTRNAVCRLLTERGFRVQTNDIN--SRQARQTIACTK---YAYGQGDNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVL----PRAGYRG--RKCNVPQAWFMW 441
H L +V+D +D G +L+ C + + +L V +DI+ + T T+ + Y + R +WV+T+PP+ A AIL A A VGV F LRLS+LEP+K RG W ++ +++ ++ PR + G R +V AW +W
Sbjct: 26 HKLLEVVD----IDPGVTILEPCAGEGD-ILNVLQYYNVGVVASDISWQPHPGQTTTDATERLFWHYWKNRLRFEWVITNPPFNEASAILPLAYKHASVGVCFLLRLSYLEPTKARGDWFLEHMDNMSNLIIFGQPRPSFTGDRRVDSVTTAWMVW 176
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: A0A6H5L6X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X2_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 1.350e-8 Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = -2
Query: 207 FNHCPRVLEGSRNDSLSLKTTPT*ATCSACFRMAKAFLYGGLVTTQSGR 353
+HCP VL GSR SLSL TPT A F++AKA LYGGLVTT SGR
Sbjct: 171 LSHCPLVLVGSRKVSLSLNATPTRPILKARFKIAKACLYGGLVTTHSGR 219
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: A0A2W4YX34_9CYAN (Uncharacterized protein n=1 Tax=Phormidesmis priestleyi TaxID=268141 RepID=A0A2W4YX34_9CYAN) HSP 1 Score: 57.0 bits (136), Expect = 5.200e-7 Identity = 41/156 (26.28%), Postives = 67/156 (42.95%), Query Frame = 1
Query: 31 MMAHLDVGGLVLDCCGS---------TRNAVCRLLTERGFRVQTNDINSRQARQTIACTKYAYGQGDNRP-DWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVL---PRAGYRG---RKCNVPQAWFMWYTG 450
++ + + G V +CC ++ RL+ + + + R A + +A + P DW VT+PP+ A IL A + G F LRLS+LEP+ R WL + L ++ PR +R + +V AW +W G
Sbjct: 37 LLNRVPITGTVFECCAGHGAISDILELTDSTERLVLQSDLSWPSPNGELRDATEQRFWESWATLEAGGSPIDWTVTNPPFCEAEQILPLAWEYSRQGCAFLLRLSYLEPTAGRADWLNEMADHLRYLITLNPRPKFRRDTKKTDSVTAAWLVWEKG 192
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 51.6 bits (122), Expect = 3.550e-5 Identity = 37/118 (31.36%), Postives = 51/118 (43.22%), Query Frame = 1
Query: 31 MMAHLDVGGLVLDCCGSTRNAVCRLLTERGFRVQTNDINSRQARQTIACTKYAYGQGDNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTR------GQWLKDNPH 366
+ A + + G VLD CG +AV + GF +++ A ++ +PDWVVTSPPYK + + AL VA GV KL L P T G W D +
Sbjct: 58 LRAAVAITGCVLDMCGGPEDAVAQ-----GFGGTCTNLD---ASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNPVPTGEVGEFWGVWYTDGSY 167
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: K7QKA5_9CAUD (Uncharacterized protein n=17 Tax=Phapecoctavirus TaxID=2733124 RepID=K7QKA5_9CAUD) HSP 1 Score: 50.4 bits (119), Expect = 8.120e-5 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 202 DNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVLPRAGY-RGRKCNVPQAWFMW 441
+NRPD ++T+PP+K A L+++L A V ++ LRL FLE K R K+ P +L ++ R + G AW+++
Sbjct: 75 ENRPDIIITNPPFKLAMEFLEKSLKEADV-CIYLLRLGFLESKKRREFHQKNPPTNLIVLSERPSFVAGGTDKTAYAWYVY 154
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Match: UPI001FF64C0F (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001FF64C0F) HSP 1 Score: 50.4 bits (119), Expect = 8.120e-5 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 202 DNRPDWVVTSPPYKNAFAILKQALHVAHVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVLPRAGY-RGRKCNVPQAWFMW 441
+NRPD ++T+PP+K A L+++L A V V + LRL FLE K R ++ P +L ++ R + G AW+++
Sbjct: 75 ENRPDIIITNPPFKLALEFLEKSLKEADVSV-YLLRLGFLESKKRRAFHQENPPTNLIVLSERPSFVAGGTDKTAYAWYVY 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig757.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig757.14.1 >prot_P-littoralis_Contig757.14.1 ID=prot_P-littoralis_Contig757.14.1|Name=mRNA_P-littoralis_Contig757.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp MMAHLDVGGLVLDCCGSTRNAVCRLLTERGFRVQTNDINSRQARQTIACTback to top mRNA from alignment at P-littoralis_Contig757:23869..24750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig757.14.1 ID=mRNA_P-littoralis_Contig757.14.1|Name=mRNA_P-littoralis_Contig757.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig757:23869..24750- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig757:23869..24750- >mRNA_P-littoralis_Contig757.14.1 ID=mRNA_P-littoralis_Contig757.14.1|Name=mRNA_P-littoralis_Contig757.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=420bp|location=Sequence derived from alignment at P-littoralis_Contig757:23869..24750- (Pylaiella littoralis U1_48)back to top |