mRNA_P-littoralis_Contig119.58.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig119.58.1
Unique NamemRNA_P-littoralis_Contig119.58.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.180e-84
Identity = 153/213 (71.83%), Postives = 173/213 (81.22%), Query Frame = 2
Query:  794 AAPAEAAEAAPESASAYTPAKASPAXXXXXXXXXTAEDEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA 1432
            A+PA + EA+ E+++A     A P+            D EA+SLALARQL+EEEAMASYAAAVD FRS+AXXXXXX    GG+EGVA ED+AAMQALMEEDEN+PDAFA+AEDESLDYDGMLELG+AIGDVRKDRWRMRC SVIAALPRVSY+A   +GG DTKCLVC  +YEE +ELR +PCSH FHT CVDGWLEENEECPTCR SVSPQA
Sbjct:    4 ASPAASGEASAEASAATVEGTAVPSVG----------DAEAESLALARQLMEEEAMASYAAAVDNFRSAAXXXXXX---XGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPRVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSVSPQA 203          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.340e-63
Identity = 125/199 (62.81%), Postives = 145/199 (72.86%), Query Frame = 2
Query:  905 DEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA*K*QEKCTAGPSYTDCTKESISR 1501
            D EA+SLALARQL+EEEAMASYAAAVD FRS+A      G   GG++GVA ED+AAMQALMEEDEN+PDAFA+AEDESLDYDGMLELG+AIGDVRKDRWRMRC SVIAALP+VSY+A   +GG DTKCLVC  +YEE +ELR +PCSH FHT  V G +   E       ++   A      CTAG    +     +SR
Sbjct:  201 DTEAESLALARQLMEEEAMASYAAAVDNFRSAAAAARAAG---GGLDGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPQVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHAFHTGIVRGRVVGGERGVPHVPTLGFAADVKNPPCTAGFVREESQNTRVSR 396          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: B7GAT0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAT0_PHATC)

HSP 1 Score: 126 bits (317), Expect = 1.220e-29
Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 2
Query:  908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGG----GDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            EE +SL LAR L+ EEAMA Y  +  + R SA               ++ ED  AMQ L+ E+E    A    ++  L Y+ MLE+G  IGDV+ +RW +     I  LP V Y +  N G      ++KCLVC SEYEE E LR++PC H FH +CVD WL   + CP CRT +
Sbjct:   68 EEQESLELARMLMAEEAMAVYENSFQLLRESADQ-------------LSQEDYQAMQELLREEEREQVAELEDDEGELSYETMLEIGERIGDVKTERWTLDAQRHIHKLPTVVYRS-SNVGADVDDSESKCLVCQSEYEEEERLRRLPCGHSFHASCVDQWLNTKDVCPYCRTCI 228          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S1YU58_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YU58_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.110e-27
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 2
Query:  929 LARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNA-----GGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            LARQ++ EEAMASY  + +  R  A             +  ++EDLAA+QA M E+++  + F       L YD +L LG  +GDV+++RW M     I+ LP   +S  + A        + KCLVC   YEEG+ LR++PC H FH  CVD WL   + CP CR ++
Sbjct:  135 LARQMMAEEAMASYNMSANFLRDHA-------------DNYSSEDLAALQAAMAEEDSEEEEFDEGPSAELSYDTLLRLGERLGDVKQERWAMVAKEQISKLPTFKFSTCEEATLKDRDDSEVKCLVCQCPYEEGDLLRRLPCKHCFHAECVDQWLMNKDVCPYCRQAI 290          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A836C9F1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F1_9STRA)

HSP 1 Score: 119 bits (297), Expect = 5.540e-27
Identity = 65/165 (39.39%), Postives = 89/165 (53.94%), Query Frame = 2
Query:  965 SYAAAVDVFRSSAXXXXXXGDGSGGI-EGVAAEDLAAMQALMEEDENSPDAFALAEDES------LDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGG------DTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            SY A +D  R++         G GG  EG+   D+ AM+  M E++         E+E       ++YD +LELG AIGDV+++RWR+R  + IA LPR   +AR            D KCLVC+ EYE GEEL  +PC H +H +CV  WL   + CP C+ SV
Sbjct:   67 SYQAGMDALRAA--------QGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 223          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S0GIG7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIG7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.610e-27
Identity = 69/180 (38.33%), Postives = 100/180 (55.56%), Query Frame = 2
Query:  908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDE---NSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDN----AGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSP 1426
            E  +S ALAR L+ EEA+ASY+ +   F+ +A             +  ++EDLAA+QA +EEDE   N  +  A  +   L YD +L LG  IGDV+++RW      +I  +   ++   D     +   D KCL+C   YE+ + LR +PC H FHT CVD WL++ + CP CR SV+P
Sbjct:   35 ENEESEALARLLMAEEAVASYSMSSTFFQDNA-------------DNYSSEDLAALQAALEEDEFDENEIEEDADVDTSDLSYDALLMLGERIGDVKQERWTHIANGIIDKMRVSTFCKSDTDEETSHDCDEKCLICQFPYEDNDTLRHLPCKHTFHTDCVDKWLQKKDFCPYCRQSVAP 201          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S4A8X8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8X8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.320e-25
Identity = 71/187 (37.97%), Postives = 101/187 (54.01%), Query Frame = 2
Query:  908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAE-DESLD-------YDGMLELGAAIGDVRKDRWRMRCMSVIAALPRV-----SYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQ 1429
            EE +SL LAR ++ EEAMASYA ++D   ++                 + EDLAA++  M E+++  +    A+ +E++D       Y+ ML LG  IGDV+ +RW       I  LP +     S S + +A   D KCLVC  EY +GE LRK+PC H FH  CVD WL   + CP CRT++  +
Sbjct:   92 EEQESLELARAMMAEEAMASYAQSLDYLHNNQDH-------------FSEEDLAALRVAMGEEQHQYELDINADAEEAIDGEDNGDAYEFMLRLGEQIGDVKSERWAQVAQQRIDTLPILVFDPESSSNKKDANDCDIKCLVCQEEYCKGEHLRKLPCGHCFHKECVDQWLLSKDFCPYCRTTLDKE 265          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A1Z5KIZ8_FISSO (RING-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIZ8_FISSO)

HSP 1 Score: 109 bits (273), Expect = 1.210e-23
Identity = 68/185 (36.76%), Postives = 96/185 (51.89%), Query Frame = 2
Query:  905 DEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENS----PDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSA---------RDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            D E +S+ALARQL+ EEAMASY ++  + +  A                + ED  A+QA M ED++      D     E +   Y+ +L+L   IGDV+ +RW  R    IA LP   +S+         RD++   + KCLVC  EYE GE+L ++PC H FH  CV  WL + + CP CR  +
Sbjct:   58 DAEEESIALARQLMAEEAMASYQSSFQLLQQHATQ-------------FSPEDYQALQAAMMEDDDQLAQLNDEVDEDEGDGSAYETLLDLSERIGDVKAERWSWRAPHEIAKLPSFVFSSVATPSAVTTRDDS---ECKCLVCQCEYENGEQLCRLPCQHTFHMDCVQPWLMKKDVCPYCRQCI 226          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: K0RAC2_THAOC (RING-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAC2_THAOC)

HSP 1 Score: 102 bits (255), Expect = 5.230e-20
Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 2
Query: 1061 DLAAMQALMEEDENSPDAFALAED------ESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGD-----TKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            DLAA+QA + E+        +A D        + YD +L LG  IGDV+++RWR+     I  LP V +  R+ A G +      KC VC  +YEEG+ELR +PC H FH AC+D WL   + C  CR S+
Sbjct:  251 DLAAIQAALAEETEDAGGDEVAADGEGGESNEMSYDALLRLGENIGDVKEERWRLVSKEKIEKLPTVKF-LREMAEGKEENHTLVKCQVCQFKYEEGDELRALPCGHYFHAACIDEWLTNKDTCALCRKSI 380          
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A024GLD1_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLD1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.660e-17
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 1133 ESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
            +++ Y+ +LELG  +GDV+KDRWR    S +A LP    S R     G + C++C   +E  +    +PC+H+FH++CV GWL EN  CP C+  +
Sbjct:  225 DAMTYEELLELGERVGDVKKDRWRQIAPSRVARLP----SCRWKQYMGYSSCIICQHNFEPNDHALTLPCTHIFHSSCVQGWLLENSACPLCKVEI 316          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY13_ECTSI1.180e-8471.83Ring finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KY69_9PHAE1.340e-6362.81RING-type domain-containing protein n=1 Tax=Ectoca... [more]
B7GAT0_PHATC1.220e-2941.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1YU58_9STRA1.110e-2738.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A836C9F1_9STRA5.540e-2739.39RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S0GIG7_9STRA5.610e-2738.33Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4A8X8_9STRA6.320e-2537.97Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5KIZ8_FISSO1.210e-2336.76RING-type domain-containing protein n=2 Tax=Fistul... [more]
K0RAC2_THAOC5.230e-2040.46RING-type domain-containing protein n=1 Tax=Thalas... [more]
A0A024GLD1_9STRA2.660e-1739.58RING-type domain-containing protein n=1 Tax=Albugo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig119contigP-littoralis_Contig119:346741..356749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY13
Preferred nameRLIM
PFAMsPA,zf-RING_2
Model size1662
Max annot lvl2759|Eukaryota
KEGG koko:K15701,ko:K16271
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007549,GO:0008150,GO:0008152,GO:0009048,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032446,GO:0036211,GO:0040029,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043433,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0060816,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1900095,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons8
Evalue1.85e-87
EggNOG OGsKOG4628@1|root,KOG4628@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-08_004670.1
EC2.3.2.27
Descriptionprotein modification by small protein conjugation or removal
Cds size1188
COG categoryO
BRITEko00000,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig119.58.1prot_P-littoralis_Contig119.58.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig119 346988..356522 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789500.276065-UTR-P-littoralis_Contig119:346740..3469871680789500.276065-UTR-P-littoralis_Contig119:346740..346987Pylaiella littoralis U1_48UTRP-littoralis_Contig119 346741..346987 +
1680789500.3850904-UTR-P-littoralis_Contig119:356522..3567491680789500.3850904-UTR-P-littoralis_Contig119:356522..356749Pylaiella littoralis U1_48UTRP-littoralis_Contig119 356523..356749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789500.2861989-CDS-P-littoralis_Contig119:346987..3470801680789500.2861989-CDS-P-littoralis_Contig119:346987..347080Pylaiella littoralis U1_48CDSP-littoralis_Contig119 346988..347080 +
1680789500.2977185-CDS-P-littoralis_Contig119:349217..3493441680789500.2977185-CDS-P-littoralis_Contig119:349217..349344Pylaiella littoralis U1_48CDSP-littoralis_Contig119 349218..349344 +
1680789500.308876-CDS-P-littoralis_Contig119:349808..3502961680789500.308876-CDS-P-littoralis_Contig119:349808..350296Pylaiella littoralis U1_48CDSP-littoralis_Contig119 349809..350296 +
1680789500.320597-CDS-P-littoralis_Contig119:351483..3516781680789500.320597-CDS-P-littoralis_Contig119:351483..351678Pylaiella littoralis U1_48CDSP-littoralis_Contig119 351484..351678 +
1680789500.3326056-CDS-P-littoralis_Contig119:353021..3530801680789500.3326056-CDS-P-littoralis_Contig119:353021..353080Pylaiella littoralis U1_48CDSP-littoralis_Contig119 353022..353080 +
1680789500.3411098-CDS-P-littoralis_Contig119:355045..3551201680789500.3411098-CDS-P-littoralis_Contig119:355045..355120Pylaiella littoralis U1_48CDSP-littoralis_Contig119 355046..355120 +
1680789500.3548563-CDS-P-littoralis_Contig119:355697..3557741680789500.3548563-CDS-P-littoralis_Contig119:355697..355774Pylaiella littoralis U1_48CDSP-littoralis_Contig119 355698..355774 +
1680789500.3703465-CDS-P-littoralis_Contig119:356448..3565221680789500.3703465-CDS-P-littoralis_Contig119:356448..356522Pylaiella littoralis U1_48CDSP-littoralis_Contig119 356449..356522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig119.58.1

>prot_P-littoralis_Contig119.58.1 ID=prot_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
METLAANPATTVRPSSLALAESQNIQQNDQQVAGAGVPAAKSVVVKASSG
SSPAAATAPSAAAAAPGPSASKPPPSRSGSGGGGGGGGGGRGAVPPATPA
AATAAAAETPAAAAAAAAAAAATVAAAAFATPATFAAFTTPAAPARTAAA
AAAAFSSTGGGRGGAAAATDRMNLATPTVPVPAAPAEAAEAAPESASAYT
PAKASPAASPAASPAATAEDEEAQSLALARQLLEEEAMASYAAAVDVFRS
SAAAAAAAGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDY
DGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVC
LSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA*
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mRNA from alignment at P-littoralis_Contig119:346741..356749+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig119.58.1 ID=mRNA_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10009bp|location=Sequence derived from alignment at P-littoralis_Contig119:346741..356749+ (Pylaiella littoralis U1_48)
GATATCATCTCCATCTGTGTGCTCTACACCCGTCCTTACCGTCGGCCTCT GTCATCGAGCTGCTGCTTCTGCTTCCTCTTCCGCTGCCATAGCAAGACGT ATCCGCCCTCCCCGTCGAATCGGTGGTCCTTTGTGAAAGAGGGCATATCA CTCATACCTTCGGCATTGGTTTCGAGAGGCCGAGCCTTTTTTTTCACCAA CGGCTTTTTTCTCAAGAAGAAGCGAACCTCGGGAGACGGGAGAGAAGATG GAGACGCTCGCGGCCAACCCCGCCACCACCGTACGCCCGAGCTCGCTCGC TCTCGCTGAGTCGCAGAACATCCAGCAGAATGATCAGCAGGTGAAGGAAA CGCTTATAACCATTAGACGTCCAGCGGTTACGTGCTGCCTCGAGCGTGCG CCTGTAAATACACCTGGTACGTCGTACCAGGTTTAGGGCTCGCACCCGAC TTGCTCCTACCCGGGTACCCGACGAAATCGAGTAGCCCCACCGGGTACAG TGTACAAGTGCAGTAGTGTTTACAGTACAAGTACAAATGATATCATATCA TATGTGTTGTTGTTGTTGTCGTTGTTGTTGATTCTCACATTAGCTCACTA CCGCCCCAGTTTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGA GGAAAAAAATAAAAATAAAATATGGACTATGGTCACCGACAGTCAAGTCA GATAGGGTACCGTTGGGGAACCATCTGTGGTGGGCAAAGTACCAAACAAA ATACAGAAAAAAATAACAGGTTCGAAAGAAAAAACAAAAATTGGAAACAG TCCGACAAACAAAAATCCAAGACAAACCTCAACCATAACCACATACTTCG AAGTACTTCGTACATCGAACCAGGGTCCAGGGCCATGACAGACCAAGGCA AAGGCAAACCAGGGGGCATGGTCCAGTAACTACATGATCAAGAGACGAAA GACAAAAAAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGAG GAAGTGCACTCGTGCACAAACACGACAAACAGGCCGCCAAACAAAGAGGA AGCAGGGGAACGAAAAGGGAAAATAAAAAAAGAGGCGAAGAGGAACAAAA TACATAAGTGCAGAGGGAAGACCGGAAGACCGGAAGTACCGGAAGTCGGG GGGGGGGTGATAAAAAATAAAATAAAAGGCATGCAATCAATCGCAAACAT GTCTTGCCACGAGGTTTGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTC ATGCCTCCTGCTACTGGCACCACCGTAACCAGTTGTTTCTGCCCCACATC TCTGGCAGCTACACAACCGCTCCGAGATTTCCGCCCTACAGGTTTTCCAC TCCGGCCACCCCGTAGCTTGGCTTTGAGCTGCTTCTTCTGCCGCGCAACT CCAACCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTACTCCTCCTCTCG TTTATCCCCGCCATCCGTTCTCCCTCTTTTGGCCAAGGCCTGCCCCTCAG CCGCGTCCCTCTCCCTTTTCAGTCGACGTGTCTCTGATAAGTCTCCCTCT TTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTC GTACCACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCCTCTTTTTTGT CGATAGCGATGTCGAACGCTTCGAGGTCCTCCTGCGTTCGCCTCAGCCAG TCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTCTCCCAA AAGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTA CGAAGCTTATGTATCATGCAGCAGTGTGTGCTGTGTGTGTTGTCTTCCAT TCCGATGTCTTTCATTCGTGGTCCATGTGATATACTTTCACTACTACTGC TGTAGGGCAGTGATAAGGTCAGCGCACGAGCCACCAACAAAACAACCCCA AACAACACAGAATCCCCCCGGGTTCGACTGCATGTTGCCGCGAAAATCCT CCTCTGTTTTGTAAGCTTTGCGATAAGAATATTTGGTTTGAGGGAGAACA AACAATGATCGCAATAAACACGAAGCAGTTTCGGGTATAAAGCAGGACAA ACAAGAAGTCATAACCAATGCTTTTCGCACGAAGTTTTTGCTTTTGAGGG AGGGTAAACAATGACCACAATTTATACCAGGTATCAGGTACGAAATAGCT TTTGGTATGATAAGCGGCAGGTCAAACCAGCGGTATTCTTGTCTCACACC GACTCCGTGATGATGCCGCCGCACAGGTGCTAGTGGTTCCTCATTTACTG CACGCTGCGGTTGATGATAGCACGCATGCCCCTCACGCCCCCCCCCCCTC CCTTCCTCCCCGCTGCCTCCCCTCGCTGCGTTGCCACCCGTTAATGCTGA AATTCCGCTTCTTGGTCCCGCTATGAATGCTCTTGCTATGTTTGGGGCTG GCTGTATGCATTTGCTCGAGAGAACAGGTTGCTGGCGCAGGAGTGCCAGC GGCCAAGAGCGTGGTGGTGAAGGCTAGCTCCGGCTCTTCTCCCGCTGCTG CCACAGCCCCCTCTGCCGCTGCAGCTGCTCCTGGCCCCTCTGCTTCGAAA CCCCGTGCCGGCGAAGGGCTGGCGGCGAAGGGAGGTACCGGTACATCCTG CTGCTGTACCATGCTGTGCTCGAAGAAGGTTTTTCCCCATGGCGGTTGTT TTTCTTTTTCTTTTACTGCTGTTCATCGGACATGCATCCTGACGCGAAAT TTTACGTCAGGACGGCAAGAGTGATTATTTGCCTCCGGGGTCCGAAGCAC CGTGATCTCAGGGTACGCTCCGAACCTCCACTGTTCCGGGCGTTATTTTG TTATTTTTGGTTGCACGTACGATACGAAGCAGCAGTTTGACATCCCAACG ACCAACGGGCAGCAACTTTAGATGTGCCGGTTGGTTGTAAGACTCCTCTC TCACCGCGCCCGCCGTGGTGCCTTTCCCCCGTCTGCGCCGTCACGAATGG TACCTACTGGTGTCCGGACCACATCATCACTGCTGCAGTGGGAAAGTCGT CCAAAGAGGGGCGACGAGCACCCAGCCGCAGCGGCAGCGGTGGCGGCGGC GGCGGCGGCGGCGGCGGCCGCGGAGCAGTACCACCAGCAACACCGGCAGC AGCGACAGCAGCAGCAGCGGAAACACCGGCGGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAACAGTAGCAGCGGCAGCGTTCGCGACGCCGGCGACA TTTGCAGCTTTCACTACACCAGCCGCGCCAGCCAGGACAGCAGCAGCAGC AGCAGCAGCGTTCTCGTCGACGGGAGGAGGAAGAGGAGGAGCAGCAGCAG CAACGGACAGGATGAACCTCGCCACTCCCACGGTGCCGGTGCCGGCGGCT CCAGCGGAGGCTGCGGAGGCTGCTCCTGAGTCGGCAAGCGCTTACACGCC TGCAAAGGCTTCGCCTGCGGCCTCTCCTGCGGCCTCTCCTGCTGCGACTG CCGAGGACGAAGAAGCGCAGTCCCTTGCTTTGGCGAGGCAGCTTCTAGAG GAGGAGGTGAGCGAAGTAGCCAACGCGCGGCAAACGAGCTGATCGACCAG TCTCTGTCATACGCATTAGATAAAATAGAAGTATCAGGTTGTCGACAGTG TCGTTCATTATTTTCATTGACGACAGCAGTAATGAAAGGAGATGACACCG TTGGTCGGGGATGCTTTCCACGCTCAGTACGATGACGCGGGTGCTTGCAC CATCACCAGCTACCGTCCAAGGGAAACGACACCAATACAAAACACGCACG GAAGACGATGTCATCGGGAACGGGCCCGAGCGACGACCACCTGCCATTGT AACGAAACCACGCGAACACGAACATACACGCACACGAAGAAAAAATAGAA AGGCGATGGCATGGTTTGGATGCCCTAAGCTTGACCACTTGCCTTCCTAA CTTGACACCGCAAACACAGAACACGATCAAGGCCGACCAAAGCGATGGCG TCGCATGTACGCTGCCTCTATCCATGACCACTTGTCAATCTATTGCAACA ACGCGGACATCAACACCAACACATGATATTAATATTGACACGAAAAAAGG CGATGGCATCGCGTGTGTGTATGCTTCAACCATGCCGCCAACCATGACTA CTTGTCACCCCATCGCAACGACGCAAACGTCAACATCAACACAAACACCA TCGCATGTATGCCCTCACCGCCTCCCACCGCTCTAACAAAAAAAAAAACA CAACACCGACGCCAAAGAAAGGAATCCACCCCCCCCCCCCCCCCACCGCG ACCACCTGCCAAAATCCAACAAACATCCAAAACATCGACACTGCTGTTTG ACGTACGAATCATACATGGTATTTGTACGATCTACGGGGTCTCTGGGGTA TGCGATGTTTGTTGTGAGGGATAGACGGGGCCCCGCTGCTTCTGTCCCTC GTCGTTCGCTCGCCCTCGCCTCGCCATCATATGCACCCCTGTTTCTGAGT CGAGAAACGCATTCCTCGTCTAGGCGGCGTCCGCGTGATCAAATGTGTTC ACGTGTCGAGCCGGGGCTGGCCGAACAGACGGGGCACCAACGCGGAACAC GCAAAAGGGAAGCTTGATTGCACGCCCCATCACCGCCACCGCCGTGTCAT CTATCGAAAAGACCAACACTGACACCAACACTGACACCAACAAGTCCGAC ACCAACAACACCAACACTAATACTATCAATTATCAAATGACAGGCGATGG CATCTTATGCGGCGGCGGTGGACGTCTTCCGCAGCTCGGCGGCGGCGGCG GCGGCAGCGGGGGACGGCAGCGGCGGCATCGAGGGCGTTGCGGCGGAAGA TTTGGCGGCGATGCAGGCCTTGATGGAAGAAGACGAGAACAGCCCGGACG CGTTCGCTCTGGCCGAGGACGAGTCGCTAGACTACGATGTACGTCTCCTC GGCCGTAATACGTATTTCGCTTCGGCGTGTAATACGACGGTCACTCCAGT AGCCGCCACGGCGGTTGCTTCTCGTGCTTTCTCTACACTCTCACTATTTG AGATACTTATTAAAGTTTTCGAGAGCATGGGGACGCCGCCCTGAGTGACG TCACCGGTCGACCAGGGATTTTAAACTATTCAGAAATTTGAAATTTGAAA TTTGCTTTCAAAAAATAATTTTCCTCTTAAAAAAAAAAATGACCAATCAG AAATCCCCTTTCAAAAAAATTGACCAATCAGAAACCTGCGGTCACCCTTT CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGC TGGTCTTACAGTAGAGCAGCGACAATCTCGTGCTGGTGGTAGGTAGTGCA GGGGGGGATCGTGACGCGTCAGGCGGCGATTACCCCGAGAGCCTCGACTT CCGTCATCCGCATCTCTGCTCTTGAGCGTGTGTGTTGTTTATTTTTTTTG TATTTTGTGCGGTTTCTGTTCTGGATATGATACGATAACCATATGCAAGG ACTGATCTCCGCACGGTCCTCGGATTCTTCACGAGCAATTGTATATACTT CGGATATAAAACTCCGGCCTAATCAGTGGTTTGCACACGCCGACACTTTA TTTCGCTGTACTTGTTTATTAGGCCAAGAACGACTCGGTCGCATGTGCAG ACTTTGCATGATGTGTGTCTCAGCTCTCTTGGATTGTGTGCCTTCCGTAT GATGGGTCGCGGCAAGATGCCACGGAACCCCTCCGAACGAAGTTTCAAAG CGCGATAAAGGGGTGTTACGGTACTGTATCATATTGTTCGCCGATAAAGG TTCAACAAACGCCGCAACAAAGGCGGTGTGCCAACTTTTTCGACGAGATG GTTGATTCCAGAATATTAACGCCTCTTTTTATTTTCTGAAAGCTCTCCCT CTCTCAACGAGATGGCTTCATCATTCCAAGCCGATCACCTTCATTGATGC AGCACCGCCATTCTTTCTGTAATCGATTCCCCCCTCTTCACTCTTTACCT TTGTATGATATTTAACTCCTTTTTTTCTGTCTTCTGTGTTGTGCTCTGTT TCTGTATTTCCACAGTTTTCATTTCTTTGTTTTTCTAGTTTCTGTTTTCT TTCTGTTTTCTTTTTTCTCTTTTCTCTTCCCGATACTTTTTTTTCGATTT CTGTTTGTGATTTTTTTTTTTTTGGCTGTTTGGCTGCTTTAAATTTTCTG TTTCTCCCCCCCGACCTACCCACCCACCCACCCAACCAAGTCACGTACCC TACCAACCACTCCTATTTCCGTTCTCGACAGGGAATGCTGGAGCTCGGGG CAGCCATCGGTGACGTTCGGAAGGACAGATGGAGGATGAGGTGCGTGCAG TACCGCTACAGCAGTAGGTGGGCACCGTATCAGCCGGCAGCGACTGACTG GCAGCAGGAAGCTGCAGCTGCTGTTGTTGTCGATGATGTTGGTGGGGGTG GTAGTGGTAGAGGAGGCGGTGTGTGTCTGTGTCTGTGTCAGTCTGTGTGT TGTCTCCCGTCTGTTTCGGGCGTGCGGGAAGGCATCACCCGGGGTCACTC AGGAGGAGGAAGGTTGAAGAGAAGCTTGTTGTTGTTGTTGTTGTTGTTGT TGTGTGGCGTTGTACTCTTTTGAGCATACAGCGAAATCAAATCATGAGAG TCTGACCTGTTGCTACATGAGATCATCGGCAGCAACCGACCAACTAGCGG CAGGAAGTTCGCTGTTTTTTGGGACGATTCGACGCAAAACGTTGCGAAAT GATACTTCGTAGAAGAGAGTCGAGCTGCTCTATTTTCAGCACTTAAGGCC ATCCGTGCGCAGCAAGCAGCATTGTGAGGACGTACATAGACCCCATCTAA GATAAAAACAAGGTTGGAGCTGCTGCACCGCGACGCTAGAAAGGGGTGCA GTATTGTTTTTCAGACCCGTGGTGGCACAGCAGAGCAAGGATCACTCTTG ATGGACTGTTCTTCTCTGTCGCTACAGCAGAACCAGGTAGATGCTTTCAC TTTAGTAGAATATAGTAGCCCTTTCTGAGGGAGCCCCGTGATCCGAGTCA GTGGCAATAGACACCAAAGGTATTAGCCCCATATGCCGGGACGCCACGAT CGGAGCCTGTGGCGAAACAGAGGAACCCACAGACTACAACAATTTACAGG CATGATGCCTGAAAATTGTTGTTGTGTTGCTTCCTCTCTTTCGCCACACA TGTCTGTAAATTGTTGTAGTCAGTGGCTTCCTCTGTTTCGCCACAGGCTC CGATCGTGGCGTCCCCTCAGGTAGGGCTATTGTTTGGTTCGTGTTGATAA TTGTCCTGATTGCATTTTGCTTTCTGTTGCCTCAGGCTCGGATCACGGCA TCCCCGCAGAAAGGGCTATATGACTTTCTATTTTCTACTGAAGTTAGAGC ATCTACCTGGTTCTGCTGTGGTGACAAGAGTGTGATATCATGGTCCCGGA ACAGCAGTAGTTCGCCAAAAGTTATAGAAAGCAGACAGCAGCAGTAGGGG TGAAGCACCAGGATGGGGGGGGGGGGGGGGGGGTTCTTGTTTGTCGGCCC CGAAGTTGGGTGGACTGTTGTCTTTTCAGACCATCGATGATGATGGGGCC TGGGGCCTGGACCCCGGCACTACTGTTGAGATGCCGCCGACTCAGCACCG GGCGGTGTCTGTCAAGGGCTGCAGCAGGGCACTGAGGCATCCAGCCTGCA AGGGAATTAGGTTCAATCACTTTCCGCCGGCAAGAAGCGCGAAGTTATCA GCAGTAGGGAAAAAGTATTGAAAGCAGTGTAACTCTGTGGGTGTGATGTG GTGTGGTCTGGCGCTTCTCGCCTTGCTGCGCTGAATGAAGGGGACCAGAG GGCGGGGGCAGCTTGGGTCACTGCCGTTGTTTGTTGCTCTTAGCGACCGG ATCTGGTGATCCGGTGATAAATACAGGCATACACGACGATTTTGTTTGGT CGTCCTGGACAGGGCACAAACCCGAGCAAGAGGCACGGGCACCCAACGCA TGAGAGTAGTACCATCTGGGTCCTTTGTCTCCCCTCCCCAAAGCCGTATT TCTATTTTCATCAAACGAGCAGTGCCCGCGCTGCCCTCCCCCCCCTACCC CCACTCGCCGCAAAAGTCGCTTTTTTTTATTTTTATCCCACTAGCAGTTT AAGTGCCTGCGCTTGCTTGCCCCCCCCCCCCTCGCCGCAACCCGCTGATA AGCCGATTTTTTCCTTTTCCCGGCTATTGATTGCCCTTGCTTGCCCATTT CTCTCCCGGCGGATGCTCCCAATTCTTGCCGTGACCGCCCTTGTGTGTGA TACAGGTGTATGTCCGTGATCGCCGCTCTGCCGCGGGTTTCCTACAGCGC ACGGGATAATGCCGGCGGGGGAGACACAAAGTGGGTCGTACACTAGGAGC GCTGTTGGTGCCCATCAGAAAGTGGCGCCGCTATCATAAGTGCAATATCT TCATCACTGCCTTTTCAAGTGTCGGTGTTGGGCTTCTCCTGCAAACGTGT TTTTTTTTTTATGCTGTCTTTTTGAGTTGCTCCCAGCAGGCAGACACGTG CTGCCGACACCATAAATTTCGCATTCGTCACGCGTGTGATACGGTAGGCC CTCTGTTCTCTGTCTGCGCGTTTGATTCCGGGTTAGTATGTGCCGTGACA TGCCCACACTTACCGGATGTGGTGGTCGTTCGATGTTTGTGCTTTGGATG GAGTACACGCATATCACGCTCACGCATGTTTGGCCTTTGACCTATACCCC ATTCCCTATATAGTATGCACGACGTGACTATATCGCGTACAGAATCTGTG AGAGCTGCGTCTCGAGAAGGATGTGCGGCCAATGGTCAAGAATTACCGCG GTAGACAGCAATAAACTAGTTCGCCCCGCCATAACCTCCCCCCCCCCCCG CCACCTTTGACCCGACACGCCGGCCCCAACAACAATGTTCTCATGTTGTC TATTTAGGTGCTTGGTGTGCCTGAGCGAGTACGAAGAGGGCGAAGAGCTC AGGAAAATGCCGTGCTCCCACGTCTTCCACACAGGTGACTGATGACGCTG TAACATGTCACGCATCTGTCTTTCTCTTTACTGTTCTATCTTTCTATCAA TCTATTTATCTATCAATCTGTCTATCCATCTATCTATCCATCTATCTATC CATCTATCCATCTATCGATCTATCGATCTATCTATCTATCTATCTATCTA TGCCATCTTGGATTGTTGTTTGGTTGTAGATACGTCCATGTTTTGTACGT CACGATAAAAAAGGCGTTTGGGGGACCGATATGTCTCCAAGATCTGATAT CTACCGGTGCTTTTTCAGGTTGGCTGCCGAGCAGTAGGGTGTATGTTGTG GATTTTGAGGCACACGGCCAACTTCTGCTTCTGTTTCCGTTCTTGCTGGA GCCGACACAACAGGGGGTGAATATGATGTCACACATCAACAGAATATTCG GTTTGAAAACTATTAATGCACAGGCGGGCTGGACTTACTAGGCAGGAGCT CGTATTTCCTGTGTGAAGCCTGGTGTTGTCAGTGGCTCCATGTAGGAACT GCTGGCTCTGTCTCGGAATGACCAGAGCAACCGAGAGATGACCCACGCCC CCCCGGCCTTCCCTCCTCTTCCTGCCTCCTCCCGCCTCCCCCCCAACACC CCCAACACCCCCGTCAATCCGCGCACCCCCTCCCTGAACGTGATCGGATG ACTCCCAGCGTGCGTCGACGGGTGGTTGGAGGAGAACGAAGAGTGCCCCA CGTGTCGAACATCAGTTTCGCCGCAAGCCTAGAAATGACAAGAAAAGTGC ACCGCAGGCCCCAGCTATACTGACTGTACCAAGGAGTCAATCAGTCGTGG AGATAGAATAGGGTACATTCTCAAGTACTATGGCCGCGACAAGCGCAGCC TACTTCTTCTTCATCTTCTTCTTCTGTAGAATAATGCCGTACGTAGACTA GCCGGCAAGAAGCCGGACTTGAAGAGAGACGAGTGATTGGATGGGTGGGT GAATGGGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig119:346741..356749+

>mRNA_P-littoralis_Contig119.58.1 ID=mRNA_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig119:346741..356749+ (Pylaiella littoralis U1_48)
ATGGAGACGCTCGCGGCCAACCCCGCCACCACCGTACGCCCGAGCTCGCT
CGCTCTCGCTGAGTCGCAGAACATCCAGCAGAATGATCAGCAGGTTGCTG
GCGCAGGAGTGCCAGCGGCCAAGAGCGTGGTGGTGAAGGCTAGCTCCGGC
TCTTCTCCCGCTGCTGCCACAGCCCCCTCTGCCGCTGCAGCTGCTCCTGG
CCCCTCTGCTTCGAAACCCCCACCCAGCCGCAGCGGCAGCGGTGGCGGCG
GCGGCGGCGGCGGCGGCGGCCGCGGAGCAGTACCACCAGCAACACCGGCA
GCAGCGACAGCAGCAGCAGCGGAAACACCGGCGGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAACAGTAGCAGCGGCAGCGTTCGCGACGCCGGCGA
CATTTGCAGCTTTCACTACACCAGCCGCGCCAGCCAGGACAGCAGCAGCA
GCAGCAGCAGCGTTCTCGTCGACGGGAGGAGGAAGAGGAGGAGCAGCAGC
AGCAACGGACAGGATGAACCTCGCCACTCCCACGGTGCCGGTGCCGGCGG
CTCCAGCGGAGGCTGCGGAGGCTGCTCCTGAGTCGGCAAGCGCTTACACG
CCTGCAAAGGCTTCGCCTGCGGCCTCTCCTGCGGCCTCTCCTGCTGCGAC
TGCCGAGGACGAAGAAGCGCAGTCCCTTGCTTTGGCGAGGCAGCTTCTAG
AGGAGGAGGCGATGGCATCTTATGCGGCGGCGGTGGACGTCTTCCGCAGC
TCGGCGGCGGCGGCGGCGGCAGCGGGGGACGGCAGCGGCGGCATCGAGGG
CGTTGCGGCGGAAGATTTGGCGGCGATGCAGGCCTTGATGGAAGAAGACG
AGAACAGCCCGGACGCGTTCGCTCTGGCCGAGGACGAGTCGCTAGACTAC
GATGGAATGCTGGAGCTCGGGGCAGCCATCGGTGACGTTCGGAAGGACAG
ATGGAGGATGAGGTGTATGTCCGTGATCGCCGCTCTGCCGCGGGTTTCCT
ACAGCGCACGGGATAATGCCGGCGGGGGAGACACAAAGTGCTTGGTGTGC
CTGAGCGAGTACGAAGAGGGCGAAGAGCTCAGGAAAATGCCGTGCTCCCA
CGTCTTCCACACAGCGTGCGTCGACGGGTGGTTGGAGGAGAACGAAGAGT
GCCCCACGTGTCGAACATCAGTTTCGCCGCAAGCCTAG
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