mRNA_P-littoralis_Contig754.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig754.21.1
Unique NamemRNA_P-littoralis_Contig754.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A6H5JF92_9PHAE (6-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF92_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 2.490e-140
Identity = 213/275 (77.45%), Postives = 232/275 (84.36%), Query Frame = 1
Query:   55 MTTTLLIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILSGLAQAQGVDWSKTKIYFADERCVPLDHGDSNYKAWEGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFT---------------PSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQCSPEIMALATKC 834
            MTTTLL+GSS DALA EL+RR+G IA +SV ARGVF V VSGGSMPKILSGLAQA+G+DWSKT+I+FADERCVPLDH DSNYKAWEGLF+SSGIP ENV+ V T+L+PEEAAA Y+A L   F                P+AS  P FDAALLGVGPDGHTCSLFPSHPLLEERSKWVA+IEDSPKPPPQRVTLTYPVLNNSR+VMFIGTG GKASLLPQLLSV  DGAL+SAG+SSPYPAARV V EG  LAWCVDEAAASQC PEI+ALATKC
Sbjct:    1 MTTTLLVGSSPDALATELVRRLGAIAKESVLARGVFNVTVSGGSMPKILSGLAQAEGIDWSKTRIFFADERCVPLDHTDSNYKAWEGLFSSSGIPAENVVAVRTDLTPEEAAADYQAKLRHHFPXXXXXXXXXXXXESLPTASPPPSFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAYIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLSVGTDGALESAGESSPYPAARVKVAEGKALAWCVDEAAASQCPPEIVALATKC 275          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A3F2RX10_9STRA (6-phosphogluconolactonase n=22 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RX10_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.260e-63
Identity = 125/262 (47.71%), Postives = 167/262 (63.74%), Query Frame = 1
Query:   43 YQHQMTTT---LLIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS-GLAQAQG-VDWSKTKIYFADERCVPLDHGDSNYKAWEG-LFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQCSPE 810
            Y H    T   L + S+ D +  ++ + I  ++  ++ A G FTVA+SGGS+PKIL+ GL   +G VD+SK  +YFADERCVPLDH DSNYKA +  LF    +P   +  ++  LSP + A  Y   L E +    S  P FD  LLG+GPDGHTCSLFP HPLLEE++ +VA IEDSPKPPPQR+TLTYPV+NN+ +V F+ TGAGKA L+P ++ V           + P PAA V   +G+ + W +DE AA++ S E
Sbjct:   16 YSHLRPATDMVLRVSSTPDQVGVDVGKLIHDLSKQAIAAHGRFTVALSGGSLPKILNKGLESIKGDVDFSKWFVYFADERCVPLDHDDSNYKACKAALFDFIPVPTSQIYTIDASLSPADMAVDYTKKLAEIW---GSDLPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPPQRITLTYPVVNNAANVAFVATGAGKAELIPHMVGVEKR--------TPPLPAANVKPTDGV-VYWFIDEDAAAKLSDE 265          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: K3WB39_GLOUD (6-phosphogluconolactonase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB39_GLOUD)

HSP 1 Score: 205 bits (521), Expect = 1.270e-59
Identity = 118/246 (47.97%), Postives = 155/246 (63.01%), Query Frame = 1
Query:   70 LIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS-GLAQAQG-VDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQ 798
            ++  ++D + + +   + +++  ++   G FT+A+SGGS+PKIL+ GLA  QG VD+SK  +YFADERCVPLD  DSNYKA  E LF    IP   +  ++  LSPE AA  Y A L   +    S  P FD  LLG+GPDGHTCSLFP H LL+E   +VA IEDSPKPPPQR+TLTYPV+NN+ HV F+ TGAGKA L+P ++               P PAA V    G  + W +D+ AAS+
Sbjct:    4 VVRPTADEVGSAVGELVLSVSQKAIATHGRFTLALSGGSLPKILNKGLAAIQGDVDYSKWHVYFADERCVPLDSDDSNYKACKEALFDHIAIPAAQIYTIDASLSPEAAAVDYTAKLASVW---GSELPRFDLILLGMGPDGHTCSLFPGHKLLKEDKLFVASIEDSPKPPPQRITLTYPVVNNAEHVAFVATGAGKADLMPHMVGTEKR--------DPPLPAAAVKPKNGT-VYWYIDQDAASK 237          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A8K1FBT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBT4_PYTOL)

HSP 1 Score: 206 bits (524), Expect = 1.800e-59
Identity = 117/247 (47.37%), Postives = 161/247 (65.18%), Query Frame = 1
Query:   64 TLLIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS-GLAQAQG-VDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAAS 795
            T+++ +++D + A + R +   +  ++  RG FTVA+SGGS+PKIL+ G+++ +  VD+SK  ++FADERCVPLDH DSN+KA  E LF    IP + +  ++  LSPE+AA  Y A L   +    S  P FD  LLG+GPDGHTCSLFP HPLL+E   +VA IEDSPKPPPQR+TLTYPV+NN+ HV FI TG+ KA L+  +L +             P PAA V   +G ++ W +D+ A S
Sbjct:   37 TVVVHANADGVGAAVGRLVQERSQQAIATRGKFTVALSGGSLPKILNKGVSEIKDTVDFSKWHVFFADERCVPLDHDDSNFKACKEALFDHVPIPADQIYTLDASLSPEQAAVDYTAKLATIW---GSELPRFDLLLLGMGPDGHTCSLFPGHPLLDEHKLFVASIEDSPKPPPQRITLTYPVVNNAAHVAFIATGSSKAPLMAHMLGLEQR--------EPPLPAALVQPPQG-RVTWYIDQDAMS 271          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A3M6VDW2_9STRA (6-phosphogluconolactonase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDW2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.020e-59
Identity = 117/255 (45.88%), Postives = 160/255 (62.75%), Query Frame = 1
Query:   73 IGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILSGLAQA--QGVDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASG------FPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQCSPE 810
            + S+ D + A + + I  ++ +++ A G FTVA+SGGS+PKIL    QA    VD+SK  +YFADERCV LDH DSNYKA  E LF    IP+  +  ++  L+P+  A  Y   L E +    S        P FD  LLG+GPDGHTCSLFP HPLLEE++ +VA IEDSPKPP QR+TLTYPV+NN+ +V F+ TGAGKA L+P ++ +           + P PAA + + +G ++ W +DE AA+  S +
Sbjct:    5 VSSTPDKVGAAVGQLIFKLSKETITANGRFTVALSGGSLPKILKKGLQAIKDEVDFSKWFVYFADERCVSLDHNDSNYKACKEALFDFISIPESQIFSIDASLTPKSMAVDYTKKLAEVWGNDVSTPLVLPVLPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPSQRITLTYPVVNNAANVAFVATGAGKAKLIPHMVGIEKR--------TPPLPAANIKLIDG-EIYWFIDEDAAAMLSED 250          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A5D6XPB3_9STRA (6-phosphogluconolactonase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPB3_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.520e-59
Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   91 ALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS-GLAQAQG-VDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQ 798
            A   EL+ R+     +++ ARG FT+A+SGGS+PKIL+ GL+  QG V+++K  ++FADERCVPL+H DSNYKA  E LF    IP   +  ++  LSPE AA  Y A L   +       P FD  LLG+GPDGHTCSLFP H LL+ER+ +VA I+DSPKPPPQR+TLTYPV+NN+ H+ F+ TGAGKA L+P +L               P PAA V    G+ + W +D+ AA++
Sbjct:   14 AAVGELVLRVSQ---EAIAARGRFTLALSGGSLPKILNKGLSALQGDVNYAKWHVFFADERCVPLEHDDSNYKACKEALFDHVAIPAAQIHTIDASLSPEAAAVDYTAKLATIW---GDELPRFDLILLGMGPDGHTCSLFPGHKLLQERTLFVASIDDSPKPPPQRITLTYPVVNNAEHIAFVATGAGKAELMPHMLGRETR--------EPPLPAADVKPTHGV-VYWYIDQDAAAK 237          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A2D4CA35_PYTIN (6-phosphogluconolactonase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA35_PYTIN)

HSP 1 Score: 204 bits (519), Expect = 4.940e-59
Identity = 122/253 (48.22%), Postives = 163/253 (64.43%), Query Frame = 1
Query:   79 SSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS-GLAQAQ-GVDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSV-RGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQCSPEIMALA 825
            +S+DA+   + + +   + +++   G FT+A+SGGS+PKIL+ GLA  + G+D+SK  ++FADERCVPLDH DSNYKA  E LF    IP   +  ++  LSPE AAA Y   L   +    +  P FD  LLG+GPDGHTCSLFP HPLL E+  +VA IEDSPKPPPQR+TLTYPV+NN+ HV F+ TGA KA L+  +L + R + AL         PAA V+   G+ +AW +D  AAS   P ++  A
Sbjct:   23 ASTDAVGLAVGQLVHKHSREAIAKHGRFTLALSGGSLPKILNKGLASIKDGLDFSKWHVFFADERCVPLDHDDSNYKACKEALFDHVSIPASQIYTIDASLSPEAAAADYTTKLASVW---GAELPRFDLLLLGMGPDGHTCSLFPGHPLLNEQRLFVAAIEDSPKPPPQRITLTYPVVNNAAHVAFVATGASKAPLMAHMLGLERREPAL---------PAAAVSPSNGV-VAWYIDRDAAS---PAVLGAA 259          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A0C3B1K1_9AGAM (6-phosphogluconolactonase n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3B1K1_9AGAM)

HSP 1 Score: 203 bits (516), Expect = 1.220e-58
Identity = 116/248 (46.77%), Postives = 155/248 (62.50%), Query Frame = 1
Query:   64 TLLIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILSGLAQAQGVDWSKTKIYFADERCVPLDHGDSNYKAWEG-LFTSSGIPKENVIPVETELSP--EEAAAAYEATLNEAFTPSASG-FPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAAS 795
            TL +  ++D + + L   +     ++VE +G FTVA+SGGS+PK+L GL   + VDW K ++Y+ADER VPLDH DSN+   E  L++   IPKEN+ P++T L    EE + AYE  L   F    S  FP FD  LLG+GPDGHTCSLFP H LL E  +WVA++EDSPKPPP+R+TLTYPV+N++  V F+ TGAGK  +L ++L     G           P +RV    G  + W VDE AA+
Sbjct:    9 TLYVMKNADEVVSALASYVLHAQKEAVEKKGRFTVALSGGSLPKMLRGLIGVESVDWDKWQVYYADERAVPLDHPDSNHGLCEKELYSKVPIPKENIHPIDTTLLDDLEELSDAYEKALILQFASKDSARFPIFDLILLGMGPDGHTCSLFPGHELLAEEDRWVAYLEDSPKPPPKRITLTYPVINHALRVAFVATGAGKQEMLSKVLDQPELG----------LPCSRVRP-TGGSVCWFVDEDAAA 245          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A8K0UQQ4_9AGAM (Uncharacterized protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UQQ4_9AGAM)

HSP 1 Score: 201 bits (512), Expect = 4.750e-58
Identity = 117/255 (45.88%), Postives = 158/255 (61.96%), Query Frame = 1
Query:   49 HQMTTTLLIG-SSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILSGLAQAQGVDWSKTKIYFADERCVPLDHGDSNYK-AWEGLFTSSGIPKENVIPVETELS--PEEAAAAYEATLNEAFTPSASG-FPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQ 798
            HQ ++ +L    + D L   L + I     +S+E +G FTVA+SGGS+PK L+GL   +G+ W K ++++ADER VPLDH DSN++   E LF+   IP++N+  ++  L+  PE+ A AYE  L   F    S  FP FD  LLGVGPDGHT SLFP H LL E  +WVA I DSPKPPPQR+TLT+PVLN++  V F+ +GAGKA  L ++L     G           PA+RV      ++ W VD+AAAS+
Sbjct:    2 HQPSSPILCSFPNPDELVESLAQFIIQAQKESIEKKGKFTVAISGGSLPKQLNGLIGKRGIKWDKWQVFYADERIVPLDHEDSNHRLCTEELFSKVPIPQQNIHTIDYSLASDPEDLADAYEKELIHEFANKDSARFPVFDLILLGVGPDGHTASLFPGHELLSEEDRWVAEIVDSPKPPPQRITLTFPVLNHASRVAFVASGAGKADTLKEVLDTPEVG----------LPASRVRPLSPGQVYWFVDDAAASK 246          
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Match: A0A0D0BYH7_9AGAM (6-phosphogluconolactonase n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0BYH7_9AGAM)

HSP 1 Score: 201 bits (510), Expect = 1.060e-57
Identity = 113/242 (46.69%), Postives = 151/242 (62.40%), Query Frame = 1
Query:   85 SDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILSGLAQAQGVDWSKTKIYFADERCVPLDHGDSNYKAW-EGLFTSSGIPKENVIPVETELSP--EEAAAAYEATLNEAFTPSASG-FPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKASLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQ 798
            S+ LAA ++R       ++V+ +G FTVA+SGGS+PK L+ L     V W K +++FADERCVPLDH DSNY    + LF+   IPK+N+  ++  L    EE A AYE  L   F    S  FP FD  LLG+GPDGHTCSLFP HPLL E  +WVA+IEDSPKPPP+R+TLT+PVLN++  V+FI  G GKA +L  ++              +  PA+RV      ++ W VD AA+++
Sbjct:   23 SENLAAFIVRA----QKEAVDKKGRFTVALSGGSLPKQLNKLIDNPAVKWDKWQVFFADERCVPLDHEDSNYNLCRKELFSKVSIPKQNIHHIDVSLLDDLEELADAYEKALISEFAQKDSARFPVFDLILLGIGPDGHTCSLFPEHPLLTEEDRWVAYIEDSPKPPPKRITLTFPVLNHALRVVFIAAGEGKADILSTIID----------NPQAGLPASRVTPSHPGQVYWYVDNAASAK 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig754.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF92_9PHAE2.490e-14077.456-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID... [more]
A0A3F2RX10_9STRA2.260e-6347.716-phosphogluconolactonase n=22 Tax=Phytophthora Ta... [more]
K3WB39_GLOUD1.270e-5947.976-phosphogluconolactonase n=1 Tax=Globisporangium ... [more]
A0A8K1FBT4_PYTOL1.800e-5947.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VDW2_9STRA2.020e-5945.886-phosphogluconolactonase n=1 Tax=Peronospora effu... [more]
A0A5D6XPB3_9STRA3.520e-5948.956-phosphogluconolactonase n=1 Tax=Pythium brassicu... [more]
A0A2D4CA35_PYTIN4.940e-5948.226-phosphogluconolactonase n=1 Tax=Pythium insidios... [more]
A0A0C3B1K1_9AGAM1.220e-5846.776-phosphogluconolactonase n=1 Tax=Serendipita verm... [more]
A0A8K0UQQ4_9AGAM4.750e-5845.88Uncharacterized protein n=1 Tax=Cristinia sonorae ... [more]
A0A0D0BYH7_9AGAM1.060e-5746.696-phosphogluconolactonase n=8 Tax=Suillus TaxID=53... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig754contigP-littoralis_Contig754:51547..56892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJ68
PFAMsAAA,Glucosamine_iso,Peptidase_M3
Model size1448
Max annot lvl2759|Eukaryota
KEGG rclassRC00537
KEGG koko:K01057
KEGG ReactionR02035
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00004,M00006,M00008
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.04e-142
EggNOG OGsCOG0363@1|root,KOG3147@2759|Eukaryota
Ec32 ortholog description6-Phosphogluconolactonase
Ec32 orthologEc-02_004960.1
EC3.1.1.31
Description6-phosphogluconolactonase activity
Cds size783
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig754.21.1prot_P-littoralis_Contig754.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig754 52158..56838 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.7389052-UTR-P-littoralis_Contig754:51546..521571680791558.7389052-UTR-P-littoralis_Contig754:51546..52157Pylaiella littoralis U1_48UTRP-littoralis_Contig754 51547..52157 -
1680791558.8122578-UTR-P-littoralis_Contig754:56838..568921680791558.8122578-UTR-P-littoralis_Contig754:56838..56892Pylaiella littoralis U1_48UTRP-littoralis_Contig754 56839..56892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.7577178-CDS-P-littoralis_Contig754:52157..523731680791558.7577178-CDS-P-littoralis_Contig754:52157..52373Pylaiella littoralis U1_48CDSP-littoralis_Contig754 52158..52373 -
1680791558.76996-CDS-P-littoralis_Contig754:52902..531381680791558.76996-CDS-P-littoralis_Contig754:52902..53138Pylaiella littoralis U1_48CDSP-littoralis_Contig754 52903..53138 -
1680791558.783527-CDS-P-littoralis_Contig754:54286..543781680791558.783527-CDS-P-littoralis_Contig754:54286..54378Pylaiella littoralis U1_48CDSP-littoralis_Contig754 54287..54378 -
1680791558.7937346-CDS-P-littoralis_Contig754:55708..558061680791558.7937346-CDS-P-littoralis_Contig754:55708..55806Pylaiella littoralis U1_48CDSP-littoralis_Contig754 55709..55806 -
1680791558.8029697-CDS-P-littoralis_Contig754:56697..568381680791558.8029697-CDS-P-littoralis_Contig754:56697..56838Pylaiella littoralis U1_48CDSP-littoralis_Contig754 56698..56838 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig754.21.1

>prot_P-littoralis_Contig754.21.1 ID=prot_P-littoralis_Contig754.21.1|Name=mRNA_P-littoralis_Contig754.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
MTTTLLIGSSSDALAAELIRRIGTIATDSVEARGVFTVAVSGGSMPKILS
GLAQAQGVDWSKTKIYFADERCVPLDHGDSNYKAWEGLFTSSGIPKENVI
PVETELSPEEAAAAYEATLNEAFTPSASGFPCFDAALLGVGPDGHTCSLF
PSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRHVMFIGTGAGKA
SLLPQLLSVRGDGALKSAGDSSPYPAARVAVGEGMKLAWCVDEAAASQCS
PEIMALATKC*
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mRNA from alignment at P-littoralis_Contig754:51547..56892-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig754.21.1 ID=mRNA_P-littoralis_Contig754.21.1|Name=mRNA_P-littoralis_Contig754.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5346bp|location=Sequence derived from alignment at P-littoralis_Contig754:51547..56892- (Pylaiella littoralis U1_48)
GTCACAACGAGGCAACGAGAGGAGAGATACCCAATCTTTCCGTATCAACA CCAGATGACGACGACTTTGCTGATAGGATCGAGCTCGGATGCCCTTGCCG CTGAACTCATCCGGCGAATAGGCACGATTGCCACGGACTCCGTGGAGGCG CGGGGCGTGTTCACGGTCGCCGTATCAGGCGGCTCAATGCCGAAGGTATT TCCCCGGGCTAGGTAGGCAAACGTACCGACAGAGAGTAGACTACACGCGT TGATCGTCATCGTGGTCGATGCTGCTGCGCGTTCTTCATAAACCTGCTGA AAGGAGAGCGCCTGGTGCACCTACTTGACGGGTGTTCCTTCATTGGAGCT GTGGATCTTGGTGTCGAGGGTCTACAGCAGTATACTTCTACACAGACTTC GTACCGGCACCATCTCTCCGTAGATTCCTGATATCTGATACCATCTGATA TCCATATACGGAGTATACCACTACAGTACCGCACTACCGCACGTGTACCC GACCGTTGTTTCGGCTGATCATGTTGTCGAAGGCTTTAGGCTTTCGTACC GGCACCCTCTCCCTGTAGACACCTGATATTTGATATCTGATATCTGATAC CCACACGGTACTTGTACTCGACCCTTGTTTTGGCCCTTGTTTCGGCTGAT CATGTTGTCGAGGGCTTGAAGCTTTTCTCACCTTGAACCCTCTCGCTGTA GAGGCCTACCCAGATTCAAACAAGCTGTACCCTTGTTTTCTCTCTCTCTC TCTCTCTCTCTCTCTCTGTGCGTGTGTGTTTGTGTGTTTGTGTGTGTCTT ATGTGCGTGTTGTGTTCACACTGTGATATTGTCACCGGGTATACCCTGCA TCCGACCGTACAAATCCGGCTGTAACAGCAGTCTCATAATTTCAACAGCG CGCACACCTCGCTTCGACCAACAACGACCGCCTCATGACTTCGAGAGGAA GGCACGCGACGAAAGACGCTACTACTGCTGTTGTTAGCTTTGTAATGTCC AGGAAATTTCCTCGAGCTCATGTCAACAGCAGTCTCTCTCTCTCTCCCTC TCTCTTTTCGGTTTGTTACACCGTTCGTGTCGTCAGATTCTGTCAGGCCT CGCCCAAGCTCAAGGGGTCGACTGGAGCAAGACGAAGATATACTTCGCTG ACGAGCGCTGCGTTCCCTTGGACCACGGCGACAGGTGCACCATGAGTTTT CGGCATTGTAGCAACATCAATGCTCGAGGGTGATTGGATCTCGGCGTCTG ATGTATAATTTACTTCGTACGAAATCTACCGCGCATATTTTTTCTGCGCA GCATGCCTTGCCTCCTCAAACTATTGAACCATTTGATTCCCTACAAGTAG TAGTACTGGTGAAACTTTGGGCGTCTCGTACAAATGCGCCTCTTCGAAGC AAACTGCTGTCTCTCTCGCTCTCGCGCGCGCATGCGCTTGTTGCGCCGGT GTCTTAATTATTGAAAGCAGGCCAAGTCAAAGCTCGACCCCGCCGCCGAT GCACCCGTCCGCGTGCTCTGTCCGCCACGCTATTTCCACGCCTTCCAAAG TCAAGCTCTTTTTTTTTTTTTCATTGCGGTACTGGTTTCTTGCGTTTCTT GTCCCAAGCCCAGGCGTTCCGCTTTATTTCGCTTTGAGCACCAGAACTAC CTCTCCGGCAGATTTATCCAACAGCAAAAAGCAACACAGACCGCAGCGGT TGTAGAAGCGTATGATGAGTCTCGTACATACGGACTTCTGTAAAACGGTC GGGGGACTATCGCTATACCAGGCACAGCGGTATTTCAAAAGACACGATCA AGCTTGACATACTTGCGCTTTCTACGTACGAGATACGATCGTGACTAGTT CATGATGCACACAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGTAGACAGCGCGTCTGCCCGCGCCTCTTTTCGCTGCAAGAGCAGCGTT CGTACCTCTCGCTTCATCGCTCTGCACGACACCCTCTTGTATCCAGACCC CCTGCCCCCCAAAAAGACCCGAAGGCTCTTGCACCATATGGCGTACATCT ACGGTAAGCAGAGCACGCGCGTGACAAGCATCTCTCACCCTCCCCCCTCC TCATGCCTGTCTCATCTATTTCGAAATGGTAATTTGTTACACTTGAATAC TGGCTGCTGATTTAGATTCTTGATGCGCTCGTCTGGGTAATCCGTTAGAG CACTTCGGCATTGCCTCCCGCCCGCCGACGAAGGCCATCTCAAGTGCCAC CCCCCCTTGCCAACAAGGTGCCAGCCAGCATGATCGAAGCCGTGTTCATC CACAACATGGTCAGCGTAAGGTGGCGTTCTGTTCTTCTGTATATCTCCGT CCCCTTTGCTGGCTGTCGGCCGCTCGCGTAACAGAAAAAAAAAAAGGGCA AGCATTGAAAATAAAGATACAAAGTAAAACAGCATGAAAACAAATGATAA AAACACCCGACCAACCAACAAACCAACCCACCCCACTCACCCAGTATCCC ACCCACCCGAGCAGCAACTACAAGGCGTGGGAGGGCCTCTTCACTTCCTC GGGAATCCCCAAGGAAAACGTGATCCCGGTAGAGACCGAACTCTCCCCGG AAGAAGGTGAGCGATCTACCGGTACCCGCCGCTCGGAATGCCCTCACGGA ACTCGCGAGTTATTTTCGCCCCACACTTCATGCGTTGCTCCAAAGAATGG CACGGTCACCCCTGTTACACACGCTGAAATTCCGAGGGTTTTCAACCCCC ACTCTCTGCTTCAAACATGATTTCGAGATTTTGTTTCGCCCGACGTTGAA ATTTTCCGAGTACCTGCCACACCCTGCACTTGCTCCGATAATTGTACACC CCACACCCCACACACCACACACCCTAGAGTTTCCGATGGTTTCACCTGGC GCTGATTCCGCGTGATTCCAAATCACTCGGTGAGAACCGCCAAAACTAAG CATGGTTCCCCGCGGGAATCAAGGGTGGCGGGTCTCTAGAGTATATGAAC CCGGGGCAAGGCGTCTGTATGATTCCTGCTGATCCAAGTCAATCCAGAGT TGCTCGACCCGTCAGATTATCCATTAACCAAAGGAGGTTGCGCTGCACTG ATGACCGTAGCTCGCTTTGGAAGTGCGGTCACCGGCGAGAGTAGAAGATG CGGTGTAGGTTCCGTTCATGCAAGAACTTTTTTTTTCCCAACGGTCAAAG TCTTCGGACAAACACTCAGCGCTCGTTTACCTTTCACGCGCTTCTTTAGA GCAAACCCATTCGCACGCGAAAAATCGCACAGTGCCTATTGCTACCGGTA TGTGGTGTTTTGGTTTCTGTTGCAGTCAATCGTTGTCACTGATTCCTCCT TCTTTAAATCACAGTTATCTTCTCTCTTGTTTCTCTTGTTTCTCTTGTTT TTTGTCAAAGATTGCGAAGCTTAAGCAAGAGAAGGTCCCACAGAAACAAT ATTCCGCACAATCTGTAGTAATTTTGCCGGGATCTTCACCTCTGGTGTGG TTGTCCAGTACTGAACCCAGCATAACCACGCAAGTGTTGATTGCTATCGG TTGAAACCTCCCCCCAAACTGCAGTAGCAATTCAGACAGAGATATAATCT AAGACTTTCCTCGATGGTCCTTGTGTAGTTACCCTTTCGCTTATATGATA CTCCTTTTAAAGTTTCCCTTTTTTCTCTTTTTCTCTTTTTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCCCCACCTCTCTCTCCCTCTCCCTCTCG TCAGCGGCGGCAGCCTACGAGGCCACGCTTAACGAGGCCTTCACCCCGTC GGCGTCGGGTTTCCCGTGCTTCGACGCCGCGCTGCTCGGGGTGGGGCCCG ACGGTCACACTTGCTCCTTGTTTCCCTCGCACCCTCTTCTCGAGGAGCGC TCGAAGTGGGTCGCGCACATCGAGGACTCGCCCAAGCCCCCGCCTCAGAG AGTCACGCTTACCTATCCGGTGCTCAACAACTCGCGACATGTGCGTGGAT GATGACAAGATCATGAGTATTTGTATACGTACCGGGAGTTATTGTTCGAG CCCCACGAGTTGACTGTGTTGATCGGCGTGTTTTGCCACCGCTGCGGTTG TGGTGGGCTGACGTGATGACCAGGGGGGTAAAAATGTTTTGGGAGGCTCT GATTATACTTATCGATTGAGTTTTGATGGTTGTTTTTTTCAAGTACCTTT GCCGGTGCGTGGTGAGTGCGTGTGAGCGGAGACCAAACTCACGTACCCGA CGTTTTACCCTTGGTTTGGTGCTGAGGCCGTCACAAGTCGCTGAGTTTGA GTTGTTGTTTTCACGAAAAAGAGAGGGGGTCTCTGTGTTGACTTTCCCTG GAAAACATGTGATGAAGACAGCAACAGGTAATTTCCTGCAGGTTTTTCGG GCATGTCATGTACCTTTATTCTGGAGAGCTGGAAACATTACAGCCCATCA CGTACTACAGTAGTACTGATTCTCGTTCACTCAACCCCCGTCCTCGCTCC CACCTCCACCCATTCGAAGGTGATGTTCATCGGGACCGGAGCAGGAAAAG CCTCCCTGCTCCCTCAACTCCTCAGCGTGAGGGGCGACGGGGCGCTTAAG TCGGCCGGAGATTCTTCCCCGTATCCTGCGGCCAGGGTGGCGGTGGGTGA GGGGATGAAACTGGCGTGGTGCGTCGACGAAGCAGCGGCGAGTCAGTGCT CTCCGGAGATCATGGCCCTGGCGACCAAGTGCTAAATCGGCTGATAGAAA ATATGTCAATGGGCCCAAAAGCGACGCCTATGTAGTGACTGACTGCTTAC TCCGGAGGGTTGTCAAGATTGCCTTGATGGCACGGAGGCCGTTTCGGTAG TCGCGCTTGTCCTTAAGAAGCGTTCACAGGTACAGGTCGTATGATATGTC GATGTGAAAAAAAAGACGAACATATTTGTGGGTGTTCCCGGTTGTAGACA TGTAATACGGAGTAAAAAACGGCGTTTTGAGAGAAGAAAAAGTACTCCAG GTTGTGAGGGTTGCAGGGTGTGTGAGGCTGCTGCTGTTGTACAAAGACAA CTCGAACAGTAGTTGGCTGCTGCTGAAAATCAATCAGATCAACGAAAACA ACATGAGATGACGGGCCGTGTTTAGTTTAGAGATCGGCCAGGGTGTACAC CATGGCCGGCTGAAAAAAGGAGAACCGAACAGCCTGAATTTTGGTGAGGC TGCGTACACCAAGCGGTATAGTAGTGCTGTCACAAACGGCGCCCACTCGT GTTGTCGGATGAGGTGTGGCGTGGCTCAGAGCGCCACACGAATCGAAGGC CACTGCTATCAATCAATCAAATCAAGCTGCAAGCAGTGGTGAGTCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig754:51547..56892-

>mRNA_P-littoralis_Contig754.21.1 ID=mRNA_P-littoralis_Contig754.21.1|Name=mRNA_P-littoralis_Contig754.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig754:51547..56892- (Pylaiella littoralis U1_48)
ATGACGACGACTTTGCTGATAGGATCGAGCTCGGATGCCCTTGCCGCTGA
ACTCATCCGGCGAATAGGCACGATTGCCACGGACTCCGTGGAGGCGCGGG
GCGTGTTCACGGTCGCCGTATCAGGCGGCTCAATGCCGAAGATTCTGTCA
GGCCTCGCCCAAGCTCAAGGGGTCGACTGGAGCAAGACGAAGATATACTT
CGCTGACGAGCGCTGCGTTCCCTTGGACCACGGCGACAGCAACTACAAGG
CGTGGGAGGGCCTCTTCACTTCCTCGGGAATCCCCAAGGAAAACGTGATC
CCGGTAGAGACCGAACTCTCCCCGGAAGAAGCGGCGGCAGCCTACGAGGC
CACGCTTAACGAGGCCTTCACCCCGTCGGCGTCGGGTTTCCCGTGCTTCG
ACGCCGCGCTGCTCGGGGTGGGGCCCGACGGTCACACTTGCTCCTTGTTT
CCCTCGCACCCTCTTCTCGAGGAGCGCTCGAAGTGGGTCGCGCACATCGA
GGACTCGCCCAAGCCCCCGCCTCAGAGAGTCACGCTTACCTATCCGGTGC
TCAACAACTCGCGACATGTGATGTTCATCGGGACCGGAGCAGGAAAAGCC
TCCCTGCTCCCTCAACTCCTCAGCGTGAGGGGCGACGGGGCGCTTAAGTC
GGCCGGAGATTCTTCCCCGTATCCTGCGGCCAGGGTGGCGGTGGGTGAGG
GGATGAAACTGGCGTGGTGCGTCGACGAAGCAGCGGCGAGTCAGTGCTCT
CCGGAGATCATGGCCCTGGCGACCAAGTGCTAA
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