mRNA_P-littoralis_Contig754.16.7 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig754.16.7
Unique NamemRNA_P-littoralis_Contig754.16.7
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: D8LJ69_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ69_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 7.170e-109
Identity = 193/261 (73.95%), Postives = 219/261 (83.91%), Query Frame = 3 
Query:  258 LVLSSFYTAIAWAGTAVFHREKKASRQTFNRRQWTLVSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVSR 1040
            +VLSSFYTAI WAGTAVF RE+K S+Q F+RRQWTLVSLLSV TALN LVGRANIAVPTTFDQ + QA+GP+LVLL+ATR+FKRSVS  RKVAV+PI++GVAMTWYSEMEVSRSA  VS VCIVLNAIKVVINSE+LTGE K                 ++ FAL+ GEV+G+VG+WREI  GWAPHVIALTG ASFV+TV+S+HAT FATPLTVSV+G LKQILVVAFSVLRM R+VSRLNVLGL+ VL GAVRY +VSR
Sbjct:   15 IVLSSFYTAINWAGTAVFRRERKTSKQAFDRRQWTLVSLLSVSTALNTLVGRANIAVPTTFDQML-QAVGPLLVLLLATRVFKRSVSMERKVAVIPIMVGVAMTWYSEMEVSRSAFTVSAVCIVLNAIKVVINSEMLTGEYK-----------------MSTFALVHGEVSGVVGRWREISMGWAPHVIALTGIASFVLTVMSLHATKFATPLTVSVLGALKQILVVAFSVLRMNRSVSRLNVLGLVLVLVGAVRYTIVSR 257
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: D7FYJ9_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYJ9_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 4.430e-48
Identity = 107/270 (39.63%), Postives = 171/270 (63.33%), Query Frame = 3 
Query:  258 LVLSSFYTAIAWAGTAVFHREKKASRQTFNRRQWTLVSLLSVCTALNVLVGRANIA-VPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRS---------AIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            LV+S+F+    W GT V+       +QT  R+QW  + + SV  ALN+ VG  + + VP TF+Q +++++ PV+V++I T++F ++ SRARK+AV+PIV GV M  Y +     +          + V+V C++L+ +K V++ E+LTG+ K+ PL LLSR+AP+ L+Q+A  AL  GEV+ +V  WREI  GWA + +A+TG  SF + + S+ A    +PLT+S+M  +KQ+L+VA S +  K   S LN  G + V+  + RY+++S
Sbjct:   60 LVMSAFHMFCNWLGTVVYFARSGEEQQTIKRQQWPTLIMFSVVFALNISVGNTSSSMVPVTFNQ-VMRSLVPVIVMVIGTQVFGKTFSRARKLAVLPIVAGVIMACYPDSASDSNPEARPFRAVGVIVTVFCVMLSGLKNVVSGEMLTGDIKMPPLQLLSRMAPLALVQMAVGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNLCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLS 328
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S2SVZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVZ2_9STRA)

HSP 1 Score: 127 bits (319), Expect = 7.420e-28
Identity = 80/261 (30.65%), Postives = 145/261 (55.56%), Query Frame = 3 
Query:  264 LSSFYTAIAWAGTAVFH---REKKASRQTFNRRQWTLVSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            LS+ + A    GT V+     E++  R+         +   S+  A N+ +G A++   +    Q+++++ P +V++I ++ F +S S  RK  +VP++IGV +  + EM  S     V+  C++L A KVV+++ +LTGE K+ PL LLSR+ P+  +++   A L GE+A +   W E+    A  V+ ++G ASF + + S +A    + LT+SV    KQ+L++  + +     ++ +N +G + VLAG+  Y+ VS
Sbjct:  111 LSAVHMACNTIGTLVYFGVFSEERKKRKNLGIDGQRRILAFSLIFAANIAIGNASLKYVSVNFNQVMRSLVPGVVMVIGSQFFGKSHSADRKRTLVPVIIGVMLACFGEMHFSYLGFFVTCFCVLLAAAKVVLSNVMLTGEFKLGPLDLLSRMCPLAFVEIITVAFLNGELAALAADWPELSQSKAIPVVLISGIASFTLNITSFYANKMTSALTLSVAANAKQVLMIVIATIVFGTPMNAVNGVGTMIVLAGSAWYSQVS 371
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S3VAQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAQ9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.390e-26
Identity = 76/240 (31.67%), Postives = 147/240 (61.25%), Query Frame = 3 
Query:  330 SRQTFNRRQWTLVSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWR-EILTGWAPH---VIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            +R+    R   LV L SV  +LN+ +G A++   +    Q+++++ P + +++   + K ++SR R++AVVP++IGVAM  + +M  +   + V+V+C++L A+KVV + E+LTG  K+ P+ LLS++AP+ + Q    +++ GE+  +V +W  ++     P+   +I L+G A+F + + S+ A    +PLT+ +   +KQ++++A S L  +  +S +N  G+  VL G+ +Y+ VS
Sbjct:  106 TRKQVTGRNKVLVLLYSVIFSLNIAIGNASLRYVSVNFNQVMRSLVPAITIVMGLCLGK-NISRKRQLAVVPVIIGVAMATFGDMSFTTFGLFVTVLCVLLAALKVVASGEMLTGSLKMHPVDLLSKMAPLAMGQCFVLSIVSGELTAIVKRWNVDLNPAIDPYPLTIILLSGVAAFSLNISSLMANKLTSPLTLCIAANVKQVMMIAISTLIFQTDISFMNGFGIFVVLCGSAQYSFVS 344
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S0KCI7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KCI7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.320e-22
Identity = 67/224 (29.91%), Postives = 133/224 (59.38%), Query Frame = 3 
Query:  366 VSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            + + SV  +LN+ VG  ++   +    Q+++++ P L +++   + K + S  RK+AV+P+++GVA   + +M      +  +++C++L A+KVV   E+LTG +K+ P+ LLSR+AP+  IQ    ++L GE++ ++   + +L  W   V+  +GF +F + + S+ A    +PLT+ +   +KQ+L++A + +     ++ LN  G++ VL G+  Y+ VS
Sbjct:  148 ILMFSVIFSLNIAVGNVSLQHVSVNFNQVMRSLVPALTIIMGGLLGKPT-SLRRKLAVLPVILGVACACFGDMSYQMIGLFYTILCVLLAALKVVAAGEMLTGSTKLHPVDLLSRMAPLAFIQCIILSVLTGEMSIVMS--KPVLPFWDMAVVVGSGFLAFSLNIASLQANKLTSPLTLCIAANVKQVLMLALATIIFSTPITPLNATGIIIVLIGSGVYSYVS 368
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A2D4CBD8_PYTIN (TPT domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBD8_PYTIN)

HSP 1 Score: 108 bits (271), Expect = 1.720e-20
Identity = 74/247 (29.96%), Postives = 139/247 (56.28%), Query Frame = 3 
Query:  312 HREKKASRQTFNRRQWTLVSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREI--LTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSV-LRMKRAVSRLNVLGLLFVLAGAVRYAVVSRR 1043
            H  K+  RQ    RQ +L++  S+    N++ G  ++ + +    Q+++A+ P +V++++  + ++  S ARK A+VP+  GV +    +   +   +A+++V +VL A+K V++++ L+GE K+ P+ L+   AP++ +      ++ GE + ++  W E+  L+GW      +TG  SF + V S +A    + +T+SV   +KQILV+A S+ L    AV+   V+G++ V  G   YA VS R
Sbjct:  190 HVFKRVERQPLAPRQQSLMASFSLVFVSNIVTGNWSLGLVSITFNQVMRALVPGVVVVLSALVLRKRYSAARKAALVPVAYGVFLACSGDNSATPLGVAITLVAVVLAALKAVLSNKFLSGELKLHPVDLILHQAPLSALWCLLAMVVTGECSVLLQHWHELPALSGW----YIVTGIVSFFLNVTSFYANKVTSAVTLSVCANVKQILVIALSIALYDHEAVTLQRVVGIVLVTLGGAAYAYVSNR 432
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S2A2N1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2N1_TRICV)

HSP 1 Score: 105 bits (263), Expect = 2.320e-20
Identity = 72/229 (31.44%), Postives = 125/229 (54.59%), Query Frame = 3 
Query:  378 SVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHV-------IALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVSRR 1043
            SV  +LN+ +G  ++   +    Q+++++ P + +L    + KR+ S  RK+AV+P+V+GVAM  Y EME+       + +C++L A+K V   EILTGE K+ P+ LL ++AP   +Q    + + GE+  +  +W   L+   P V       +  TG  SF + + S+ +    +PLT+ +   +KQ+L++  +       +S LN  G+  VLAG+  Y+ VS R
Sbjct:  160 SVVFSLNIAIGNVSLRYVSVNFNQVMRSLVPAVAILFGYCMGKRT-SANRKLAVLPVVLGVAMACYGEMELKLVGFVFTSLCVLLAALKAVAAGEILTGELKLHPVDLLYKMAPKAAVQCLILSWMTGEIGSIASRWSGELS---PAVDFHPTFGLVSTGLMSFTLNISSLMSNKLTSPLTLCIAANVKQVLMIGLATAIFHTPISVLNGSGIAVVLAGSAMYSYVSMR 384
[Close]
BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S2KNU5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNU5_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.180e-19
Identity = 68/226 (30.09%), Postives = 130/226 (57.52%), Query Frame = 3 
Query:  360 TLVSLLSVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            T + L S+  +LN+ +G  ++   +    Q+++++ P L +++   +  R  S  RK+AV+PIV+GVA   Y +M  +   +  + +C++L A+KVV + E+LTG+ K+ P+ LL  +AP+ L+Q  A +LL GE++ M+   + I       +I  +G  SF + + S+ A    +PLT+ +   +KQ+ ++A + +     ++ LN +G+  VL G+  Y+ +S
Sbjct:  126 TKLILYSMIFSLNIAIGNVSLRHVSVNFNQVMRSLVPALTIIMGGML-GRHTSTKRKLAVIPIVLGVACACYGDMTYTTVGMVYTCMCVLLAALKVVASGEMLTGDMKLHPVDLLGHMAPLALVQCLALSLLTGEMSTMLS--KPIPPPSHLAIIIGSGLMSFSLNIASLQANKVTSPLTLCIAANVKQVSMIAIATIMFATPIAFLNGVGIAVVLMGSSIYSYIS 348
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S4M9U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M9U7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.460e-19
Identity = 68/227 (29.96%), Postives = 128/227 (56.39%), Query Frame = 3 
Query:  378 SVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPHV-------IALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            SV  +LN+ +G  ++   +    Q+++++ P + ++      K++ +R RK+AV+P+V GVAM  Y EME++      +  C++L A+K V+  EILTGE K+ P+ LL+++AP   +Q    +LL GE+  ++ +W   ++   P +       +  TG  SF + + S+ +    +PLT+ +   +KQ+L++  + +  +  +S LN  G+  VL G+  Y+ VS
Sbjct:  296 SVIFSLNIAIGNVSLRYVSVNFNQVMRSLVPAVAIVFGYCTGKQTSAR-RKLAVLPVVGGVAMACYGEMELTAIGFIFTSQCVILAALKAVVAGEILTGELKLHPVDLLNKMAPRAAVQCLLLSLLTGELRSIISRWNSPVSPLNPLLEYHPALGVLSTGALSFSLNISSLMSNKLTSPLTLCIAANVKQVLMIGMATVIFQTPISVLNGGGIGVVLVGSALYSCVS 521
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BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Match: A0A7S3L620_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L620_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.420e-18
Identity = 65/224 (29.02%), Postives = 119/224 (53.12%), Query Frame = 3 
Query:  378 SVCTALNVLVGRANIAVPTTFDQQIIQAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAIAVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALLRGEVAGMVGQWREILTGWAPH----VIALTGFASFVMTVLSMHATTFATPLTVSVMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVS 1037
            SV  +LN+ +G  ++   +    Q+++++ P   + ++   F +  S +RK+A VP+++GVA+    +M  +R  +  +V+ + L A K V + E+L G  K+ P+ LL R+AP+   Q    A L GEVA +  +W   L  +  +    V+  +  A+F + + S+      +PLT+++   +KQ+L++  S       VS LN LG+   LA +  Y+ VS
Sbjct:  115 SVVFSLNIAIGNVSLKHVSVNFNQVMRSLSPAATMAVSMVCFGKQFSASRKLATVPVMVGVALACLGDMSNTRIGVFYTVLAVFLAAAKCVASGELLAGSLKLHPVDLLGRMAPLASAQCLLMAYLTGEVADISQRWTAELNPFVDYRPFLVVTFSALAAFGLNISSLQTNKLTSPLTMTIAANVKQVLMMVLSTFLFNTHVSPLNGLGMGITLAASAGYSYVS 338
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig754.16.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ69_ECTSI7.170e-10973.95TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYJ9_ECTSI4.430e-4839.63TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SVZ2_9STRA7.420e-2830.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3VAQ9_9STRA3.390e-2631.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0KCI7_9STRA8.320e-2229.91Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A2D4CBD8_PYTIN1.720e-2029.96TPT domain-containing protein n=1 Tax=Pythium insi... [more]
A0A7S2A2N1_TRICV2.320e-2031.44Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2KNU5_9STRA1.180e-1930.09Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4M9U7_9STRA5.460e-1929.96Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S3L620_9STRA2.420e-1829.02Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig754contigP-littoralis_Contig754:41793..49544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYJ9
PFAMsTPT
Model size2956
Max annot lvl2759|Eukaryota
KEGG koko:K15285
Hectar predicted targeting categoryother localisation
Exons7
Evalue3.61e-52
EggNOG OGsKOG1441@1|root,KOG1441@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_004970.1
Descriptioncarbohydrate transport
Cds size1230
COG categoryZ
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig754.16.7prot_P-littoralis_Contig754.16.7Pylaiella littoralis U1_48polypeptideP-littoralis_Contig754 41948..47973 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.5861304-UTR-P-littoralis_Contig754:41792..419471680791558.5861304-UTR-P-littoralis_Contig754:41792..41947Pylaiella littoralis U1_48UTRP-littoralis_Contig754 41793..41947 +
1680791558.7011664-UTR-P-littoralis_Contig754:47973..495441680791558.7011664-UTR-P-littoralis_Contig754:47973..49544Pylaiella littoralis U1_48UTRP-littoralis_Contig754 47974..49544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.6056154-CDS-P-littoralis_Contig754:41947..420551680791558.6056154-CDS-P-littoralis_Contig754:41947..42055Pylaiella littoralis U1_48CDSP-littoralis_Contig754 41948..42055 +
1680791558.6181214-CDS-P-littoralis_Contig754:43134..433171680791558.6181214-CDS-P-littoralis_Contig754:43134..43317Pylaiella littoralis U1_48CDSP-littoralis_Contig754 43135..43317 +
1680791558.633425-CDS-P-littoralis_Contig754:43696..437801680791558.633425-CDS-P-littoralis_Contig754:43696..43780Pylaiella littoralis U1_48CDSP-littoralis_Contig754 43697..43780 +
1680791558.6458344-CDS-P-littoralis_Contig754:44426..445791680791558.6458344-CDS-P-littoralis_Contig754:44426..44579Pylaiella littoralis U1_48CDSP-littoralis_Contig754 44427..44579 +
1680791558.6565166-CDS-P-littoralis_Contig754:45031..450821680791558.6565166-CDS-P-littoralis_Contig754:45031..45082Pylaiella littoralis U1_48CDSP-littoralis_Contig754 45032..45082 +
1680791558.6693828-CDS-P-littoralis_Contig754:46467..466591680791558.6693828-CDS-P-littoralis_Contig754:46467..46659Pylaiella littoralis U1_48CDSP-littoralis_Contig754 46468..46659 +
1680791558.6843123-CDS-P-littoralis_Contig754:47514..479731680791558.6843123-CDS-P-littoralis_Contig754:47514..47973Pylaiella littoralis U1_48CDSP-littoralis_Contig754 47515..47973 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig754.16.7

>prot_P-littoralis_Contig754.16.7 ID=prot_P-littoralis_Contig754.16.7|Name=mRNA_P-littoralis_Contig754.16.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=410bp
MAAAKNVGRKQLGTMVPMTGGTNATEESKREQADLVLSSFYTAIAWAGTA
VFHREKKASRQTFNRRQWTLVSLLSVCTALNVLVGRANIAVPTTFDQQII
QAIGPVLVLLIATRIFKRSVSRARKVAVVPIVIGVAMTWYSEMEVSRSAI
AVSVVCIVLNAIKVVINSEILTGESKVAPLHLLSRLAPMTLIQVAAFALL
RGEVAGMVGQWREILTGWAPHVIALTGFASFVMTVLSMHATTFATPLTVS
VMGTLKQILVVAFSVLRMKRAVSRLNVLGLLFVLAGAVRYAVVSRREKKQ
REQRRGATSAGSGNKAAQRHHSNNGGSVAAVAAAMSSGSSLLPTTVRLPA
VDTATGVRAVMVNGKRAAKREECGAGSGGVKVEGGRVTTMAWGSGWWGAE
NGDVSRRDR*
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mRNA from alignment at P-littoralis_Contig754:41793..49544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig754.16.7 ID=mRNA_P-littoralis_Contig754.16.7|Name=mRNA_P-littoralis_Contig754.16.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=7752bp|location=Sequence derived from alignment at P-littoralis_Contig754:41793..49544+ (Pylaiella littoralis U1_48)
GAACGGATGGTGGGAATGGACGAGAGCGGGCGTACGGGGGGCCAAAAGGG
CATCGGGGTCGTGGGGTTAAAGTTGCGCGGCAGAAGAAGCAACCCAAAGC
CAAGCTGCGGGGTGGCCGGATTGGAAAACCTGAACGGCACAAATCGCGGA
GCGGTATGGCTGCTGCCAAAAATGTGGGGCGAAAACAACTGGGTACGATG
GTGCCAATGACAGGAGGCACGAATGCGACTGAGGAGAGCAAGCGTGAACA
GGCAGACCTCGTGGCGAGACATGTTTGCGACTGACTGCCTGCTATTTCAA
CATTTTTCTCTCCCCGACTCCCGTTCTTTTTGCTCCACACTCTTGTGTCT
TTTTCTCATTTGCTCATTTTTTTTTTTTCCTCGGTGTTTTTGCCCCCCTT
TCGTCGTCCGCCTTTCGTCGTCCGTCTTCCGTCTTCCGTCTTCCGTCTTC
CGTCTCTTTTGTATTTCTGCTACCCTTCGGCTTCTCTAAGATTGGTCGTA
TTTGCCGGACCCTGCGCTCTGGTTGCCTTTGCTTGTCTTGGTTATGTGCT
CTGGTTCGGTATTATCATGGTTTGTCTTCGTTTCGTCTGTTTCCAATTTT
TGTTTTTGATTTTGTTTCGAGCCTGTTATTTTCTGTATTTTTGTACCTTT
GGCCACCACAGATGGTACCCCAACGGTACGATATCAGACTTTGATCGGGC
GACCATCGTTTATTTCTTTTTTTGTTTTATTTTCCTCCTAGCACGATTTG
TGCCTGGTTTGTGACCACGGGCTTGACTGTGATGGTGGAGCAAATGAGAG
AATCAACAGGAACAACAAGAACATTTGCGGTGTACGAGTGTCAACGTTTC
GCTGCCGGGTAGCCCCTTCTTCAGGCTTTACAGCAGTAGGGCGTGTAGTC
GGGCATGAGAGCAACACGTTGCAAAGCACAGAGCTAAAGTTTGTTGCGCA
GCGGCTGATGGGCCAATGGCGTTAATATGCCGTACATTGTTTTCGGGAAC
CCTTTGTTGTGGAATTCCCCCCGCGAGGCTACTCCGACATGGTGACCGCA
GAACGCAGCTACCACGCAGAGGACAGACGAAACGATGCAAACCCAATAAC
AACAACAACAACAACAGCAACAAGTGCAAAACGAAAAGTCAAGGTCTAGA
ATAAGAGAGGGAAACCGACCCGCAGATAAAGAGAGACAGAGGGCGCGTGT
GGCATGCAGCCGCTCCCGGTTCCCCTTTTACTTCAACCCGCCGTGCCCTT
TGAGCGTTTCATCGCACCCCCTTAAATCCCGCCCCCTGTTCCCTCTTACC
CAAACCGCCTGCCTCTCTTGGCGTATATACCGGTATGCACAGCTGAGCTC
GTTCTACACGGCGATAGCCTGGGCCGGGACGGCGGTCTTTCACCGCGAGA
AGAAGGCCAGCCGGCAGACGTTCAACAGACGGCAGTGGACCCTGGTGTCC
CTGCTCTCGGTGTGCACGGCGCTCAACGTGCTGGTCGGGAGGGCAAACAT
CGCCGTTCCGACGACGTTTGACCAGGTGTGTGTCTGTCGATATCATTTGA
TACGGCGTACTATTACTATGCGTGTCCTCGCCCACGAAGACCGCAGAACT
GTTGGTATCCAATTGAAACTCAAAACGTCTGATTCTACTGCTGCCTGCCG
CTGCTGCTGTTGCTGCTGCTGCTCCTGCTGCTGTGTGTGCATGGTTTGCA
TGGCACGCGCTCATTGGAATGTAGGTTGTGTGTTTGGCCCGATCGTATGT
ATGTATGCATTATGCTTACAGAAGAAAACGCATTACATTTATTTTTGTGA
ATTCCTCTCTCACGTAGTTTGTGGTGTTTATCACTCGTCGTCTTCGGTGC
CCTGCCCTACCCCCACCCCCCCCACCACCACCACCACCACCATCCATGGT
GGAGCAGATAATACAAGCAATAGGACCTGTTTTGGTCCTGCTGATAGCCA
CGAGGATCTTCAAGCGCTCGGTCTCTCGAGCGAGGAAGGTGTGCGCCCCT
GCTCGGTTTGTGTCGCTGCTGATAAAAGAGGTTCAACAGCCCTCCCTACA
CGCTAACGCTGTGTACGAAGCTCTGAGATATCGCACGAGTACAGACCTAG
GATATGTGCGCTCCCGTTCGTGGCTCTCCCCGACATTGATTATTTGTTTT
GGGAATAAAGTAAAGCACGTATCTGTACGTACCGGTATACCGCCAGCGTG
TTCGAGGGTGCTTTCTGTGCTAGAAATATCCATGTCAAGATCGTGTTCTA
TAGGCTGCTTTCTGTACTGGAAATACCGACCTCAAGAAAGAGTATTTTTC
GAAGAATTGTCCGGAGCGGGCTATTCATTCGACGCAGCAAAAAAAAGAAA
AGTAAAATTTTTAATTCTCTTTACGACGGCCCTGCACTCTCCTCTCATTC
ATTTTATCGGCTCTAGAAATCAGTGGGGCTTTTTCTTAGAGAGAGAAAAA
GAGAGAGTTTGACTGGCGCAAGTTGAAAGTATGTCTCGTGAGCGAACAAG
AAAAAAAACTGAACAGCTTTCGCCCTTAACTCTCCAGCTTCCTTGCGCAC
CCAATCCCTATCCCCTGTCAGTAACACCCCACGCCGGCTGGCCTGATTCG
TGCTTCGTGTATTTTCTGCGTATGTTCTTGAAAGGTGGCGGTGGTTCCGA
TCGTGATAGGGGTGGCCATGACGTGGTACAGCGAGATGGAGGTGTCGAGG
TCGGCGATAGCGGTTTCCGTGGTTTGTATCGTGCTCAACGCCATCAAGGT
GGTGATCAACTCGGAGATTCTCACCGGGGAGTCTAAGGTGCCAGAGACAA
AGCGAGAGAAAGCGGGGGGGGGGGGGGGGGGGGGGGGGAGCAGAAAGCAG
AGAAAGACAGAGAGAACACTTTTGTTTGTTTCTCTTGTCTGCATTTTTCG
GCGTGACATCATTATGTTTGAGATTGATTTCGCTTAAATGTACTTCTGTA
GTGAAGTCGTGAAGTCGCCAATTGGCACACATGGCTTCGCTCCTTTTTTT
GCTGATACCTTGCTTGTTAATTGTTTTCGTTTTTTTCTCGGAAAAAAACA
GGCCTGCTTCGTGTTGTGTGTGTATGATATGTACCACATGTTGTGGATAG
ACATTGTGGAGTTTCACAATGAGGCCAGAACCTCGCATTTTCGTCTCTTC
ATTATGTCCTCCTGTTTCTCTTTTTTTTTTTTCAAATTCATGGATAAACT
TGATCCCCCCCCCCCCCCGCCCGCTCGATTCACTCTCAGGTTGCGCCGCT
GCACCTGCTGTCTCGACTCGCGCCCATGACATTGATTCAGGTGAACGAAT
GAACGGACACGACTTCCTTTCGTAGGAGGTATCAAAAGTGTGTTGTGTGC
TTTTCGGTTGCCGTATCGTAGGGTCCAGGAGAATCAAGGCATTGTTTTCC
CTCCTTCTCCCCCTCGAGAGAGAGAGAGAGAGAGAGGTCATGACGGGGTC
CAAGCCGATGAGGGATCGCTATCTGCCCGACAGAGGGAAGATGGTGGTGA
TGGTGGGGAGGGCGCGGAAGGGAGATGAGTACTGCTCTTGTGTCTACGGC
ACTACGCCCCCAGCATGCTAGGGAGGCTGGTGGAGAGAGGCGAAGGTGTA
CATCCAGAGTACGTGCAGAGCGCATTGGCGAAAGAGGATAGATGAGGCGA
GTAGTGGTAGAGATAATATTGGTGATATGTTTTCGATACCCTCAACGCGC
AGCAGTGATACCCCCAACAAACAGCAGTGGTAGACATGTTGATGATCTAT
TTTTGATTCCCCCGTTACACATACAGCAGCGGTGGTACGAGATACGGATA
GCCTGTTTCGATGCCACCCCCCCCTCACGCACAAACCACAAATACACACA
GGCGGTGATAGTGCAGCAGTAGTCGAACTTTTAATGGTTTTCAATTCTCC
TATTATTAAGCACTTGAAAAGTATTCTAATTTTAGGTCTCCATACGTTTC
CCTCTGTTTCTCCGGCAAGAAAAGTCGGTGCACATCAGCGACTATGAAGT
CCTTGGGGAAGTATTATAATTGAAGACTTCAAAAACGTTTCCCTCTGTTT
CTCCGGCAAGAGAAGTCGGTGCACTATTCCAGCTATGTACTACTCGGGAA
GTATTGTAATTTAAGGTTCAAAAACCTTTCCCTTTGTTTCCACGGCAGGA
GCAGTCGGTGTACATGAAGGTGATTAAATAAAAAATAAAGTAAAATAGTT
CGGATAGCGTCCCCTCGCCCCCCCCCCCCCCCCTCCCCTTCCCGGCCGGA
AGTGAAAACCGTATTTCAATTTTCATCTTTCCCTGCATCTATCTTCTCAA
GCGGCGGGTCTGTTTGTTTTTTTTCTGCGTGGCGCGTGTCTCCTACCGTA
GGCTGCATAAGGTATCACACCGGTGTGATGACACTTCTGGGCTCAAAAAC
AATATCACACCGGTGTGATGACACCTCTGGGTTCAAAAACAATATCACAC
CGGTGTGGGATTGTGTAAATTTTGATTTGGGGTGATTGATGTAGGTATCT
TCTGTCACCCTTTTCACTGACTTAGACAGACTGGCACCTGTTTCGGGATT
GAAAGAAAAAATAGCACACGGGTGGGTGTGGTATTGTGTAACTTTTCGGA
GAGAGGGTGTTGTATCTTACGTATGAAAGTGTGATGTATTTTTTTGCAAC
CTACGGTACTGCTGTTGCGTGTTAGGTGGCGGCGTTCGCGCTGCTCCGCG
GGGAGGTGGCGGGGATGGTGGGCCAGTGGAGGGAGATACTGACGGGCTGG
GCGCCCCACGTGATCGCGCTCACCGGCTTCGCTTCCTTCGTCATGACGGT
GCTGTCCATGCACGCCACGACGTTCGCCACTCCGCTGACCGTCAGCGTCA
TGGGAACGCTGAAGCAGGCGAGAGCTCCACGGATTCAATGAATATGAAAC
AGTAGCGTCTGATTTGGCTTGTTGTTGTTGTTGTTGTTGTTGTTATTTAA
GGGTCAACAGAAAATCTCTCGGTGGTGTTCAAAATACGGCTGTCGCACGG
AGAAGTTATAGAATAGCATGAAGAAATTGTGAGGGATCGACCCCTCGCCC
CCCGCCAGACGCGACTGGGAAAGAGGCTGCCTCAGCGAAAAAGGGCTGTC
AGGACACTCGTTCCTTACAGCAGCGAGGGTTGTCTAATTACACCGGCGGC
AGCAACAAACAGCATGTCGTGTTTTTTTTTTAGAAAAATCAAATACCTGG
TAACATTAAAGACTTGTTTTTTGCCGATGAAAAAAAAAGAAAGTTCCCCG
TCCCTTTTTCGGGACACTTCGGTGTCGTGTGTGCGTGTGGGTGCGTGTGT
GTGCGTGTGTGTGGATGTATCTGTGTGTCTCGGCACCTTGTGTGTCTGTG
TGTCTATATGTCTGTGTGTCTTGTGTCTGTGTGTGTCTGTGTCGGTGTGC
GCGTGCGCGTGCGTGCGTGACTTGTAAACACTGTTCTTTTTTTGCCTTCA
CTCTTTGTTGGTGCACACATCTATGTATGATAGGTTAAGATTTTTGCCAC
GCGGGGCAACGGTGTGGTTCGTCTGATTCTCTTGCTGCTGCTCGCAGGTT
TTATCTAGTGCCGTGTGCGCGTCTTGATGGTACTTTCCCAAGAGTGTTCG
AGATAGGACGAAACGGCGTCTCATGCCTGAGGCCTATGTCTCCAACTCTT
GATATTTACCAACACCGCTGTATCGTTTGTTTTTCCGCTTTTTTTTTTTT
TTCGTGTCTCCTACCATCGCAGATCTTGGTGGTAGCTTTCAGCGTGCTGA
GGATGAAGCGGGCGGTCTCCCGTCTGAACGTTCTCGGCCTACTCTTCGTG
CTCGCCGGCGCCGTGAGGTACGCCGTCGTCAGCAGAAGAGAGAAAAAGCA
GCGAGAGCAAAGACGCGGGGCGACCTCCGCCGGTTCGGGCAACAAGGCGG
CCCAACGCCACCACAGCAACAACGGGGGCTCCGTCGCCGCCGTCGCCGCC
GCCATGTCTTCCGGGTCGTCGCTTCTTCCCACGACCGTCAGACTCCCCGC
TGTCGACACCGCTACCGGTGTCCGCGCTGTCATGGTGAACGGCAAGAGGG
CTGCGAAGAGGGAGGAGTGTGGTGCGGGCAGTGGTGGTGTCAAGGTGGAA
GGGGGGAGAGTGACGACGATGGCGTGGGGCAGCGGTTGGTGGGGCGCAGA
AAATGGTGACGTTTCGCGGCGGGATAGATGACGATATGAGAGGCCAACGT
GTCGGGCTGTAAACGCGGAACGGCGGCACCGCGGATGCCTGCACGTTTTT
TTTTTTTTATTTCATTGGTTCTGACGGCGGGAGAAACTGTTGCTGTTGCC
ATGCACCGCGTTGTTTCCGATCAGAGAAAAACAAGTTGAAACAGGAAAGT
GAATCGGCTGTTTTTCTCCCCCCCGTGTTGTTGTTGAGCCCCAGTTTAGA
GCCGTGTGTTGTGAAATATCGATGAGTTGTGACAAAAAACATGCGTAAAC
TTACACCGAAAGAAGTCAAGTGTCTAGAGAAGAAGTGCGCAAACTGCGTG
ACGTCCCGGGTATCGCAGCAGTGAGGAGAGAATTTAGAGGCGGCTGTTCT
CTCCTGCTGTTTTTTTTCTGTTCGTGATGTTTTTTTTTGCGTTCTACATG
GCTGGTGTGTCCTTGTTTGTTTGCCCGTGCATTTCCTGATTTGTCTTGCG
GTACTCTGGCATGAATGTTCATGCCTAGTATATTGTGACGGAAGACCCCC
TCTCCCCCTCCTACCCCCCCCCGCCCCGTAACCCGTGGGTCGATTTGTTT
CATCCTGGTGTAGTTTAACCCACAAAGCCTAACATGTGTCCCAAAAAGGT
TTGGTGTTTTTTAAGTGCTGTGTCGTCGAAGCGTGTGCCTCCAACGAGTG
CACCCTTTAAAGCCAAAGCTTCCAGTTTTGAAGTGGGTATATACAGAACA
GTCGTAAAATTGCGATGTTTGGACGAAGGCAGTCAGTGTGTGTTTGGTGA
TGGTAAAATAGTACGCACGTTCTGGGGTAACAATAGCAGCTTCAATAGTT
TCGGAGATGTTGTTTGTTCTTGTAAACATGAGCGAGAGGAATGGCACGCA
CTTACAATACGTGGGCGCAGTGAAAAAATGGTGGTTTGTTTCTGCTGTAA
TAATTTTGAGAGCCAAGACACGAAAACAGCTCGGGCTTCGTGTTGCTGGT
TATTCCGAAGAGGATCTGGGAGCTGTGTGTGTTCGTTGTGTTAAATTGTG
GTTTTTAAGCTTCTTGTGCGAAGATCAAGGGTTCCCTCTGGGGCGGGCAA
CTACGGCTCTCTCTTCTTTTCTTTTGTATTGTATTGTATTGTTTTGTTTT
GTTTTGTTCAATTGTGTTTTTAGGTTTCTTGTGCGAAGATCAAGGGTTCC
CTCGCGGGCAGGCAACTGCGGCTCTCTTCTCGTGGCCCTTGTGCGGGCGG
GTACCGTCGTCAACGGCTCTTTTCGGTCAGCAGAGCAGCAGCGGTCCTTT
TTGTCAAACCAACCACGCGGCGCTTTGTTGCCTTGAAGCGTTCTTCGGCC
AGCATTCGGCCAGTGCAGCAGCCGAGGAAAAAATTGAGACGCGCGGCATT
GATGATGCCTGTGGTGATGTGGTCTCTTCCTTGTTTTGCGTACTCCAGGG
AACAACTCAGCAGTCGCTTTCAAAAATGGAGCTTCATTTAGTTCGATTGA
AACGGGGTTCGTATGATATGTCCGTTGTGTTTCCGGGGAGGAGTGTTTCC
CTCGAGGAAATATTTCATCGGGGAAACGAGAGGAAGGAATCCATGATGAC
GC
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Coding sequence (CDS) from alignment at P-littoralis_Contig754:41793..49544+

>mRNA_P-littoralis_Contig754.16.7 ID=mRNA_P-littoralis_Contig754.16.7|Name=mRNA_P-littoralis_Contig754.16.7|organism=Pylaiella littoralis U1_48|type=CDS|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig754:41793..49544+ (Pylaiella littoralis U1_48)
ATGGCTGCTGCCAAAAATGTGGGGCGAAAACAACTGGGTACGATGGTGCC
AATGACAGGAGGCACGAATGCGACTGAGGAGAGCAAGCGTGAACAGGCAG
ACCTCGTGCTGAGCTCGTTCTACACGGCGATAGCCTGGGCCGGGACGGCG
GTCTTTCACCGCGAGAAGAAGGCCAGCCGGCAGACGTTCAACAGACGGCA
GTGGACCCTGGTGTCCCTGCTCTCGGTGTGCACGGCGCTCAACGTGCTGG
TCGGGAGGGCAAACATCGCCGTTCCGACGACGTTTGACCAGCAGATAATA
CAAGCAATAGGACCTGTTTTGGTCCTGCTGATAGCCACGAGGATCTTCAA
GCGCTCGGTCTCTCGAGCGAGGAAGGTGGCGGTGGTTCCGATCGTGATAG
GGGTGGCCATGACGTGGTACAGCGAGATGGAGGTGTCGAGGTCGGCGATA
GCGGTTTCCGTGGTTTGTATCGTGCTCAACGCCATCAAGGTGGTGATCAA
CTCGGAGATTCTCACCGGGGAGTCTAAGGTTGCGCCGCTGCACCTGCTGT
CTCGACTCGCGCCCATGACATTGATTCAGGTGGCGGCGTTCGCGCTGCTC
CGCGGGGAGGTGGCGGGGATGGTGGGCCAGTGGAGGGAGATACTGACGGG
CTGGGCGCCCCACGTGATCGCGCTCACCGGCTTCGCTTCCTTCGTCATGA
CGGTGCTGTCCATGCACGCCACGACGTTCGCCACTCCGCTGACCGTCAGC
GTCATGGGAACGCTGAAGCAGATCTTGGTGGTAGCTTTCAGCGTGCTGAG
GATGAAGCGGGCGGTCTCCCGTCTGAACGTTCTCGGCCTACTCTTCGTGC
TCGCCGGCGCCGTGAGGTACGCCGTCGTCAGCAGAAGAGAGAAAAAGCAG
CGAGAGCAAAGACGCGGGGCGACCTCCGCCGGTTCGGGCAACAAGGCGGC
CCAACGCCACCACAGCAACAACGGGGGCTCCGTCGCCGCCGTCGCCGCCG
CCATGTCTTCCGGGTCGTCGCTTCTTCCCACGACCGTCAGACTCCCCGCT
GTCGACACCGCTACCGGTGTCCGCGCTGTCATGGTGAACGGCAAGAGGGC
TGCGAAGAGGGAGGAGTGTGGTGCGGGCAGTGGTGGTGTCAAGGTGGAAG
GGGGGAGAGTGACGACGATGGCGTGGGGCAGCGGTTGGTGGGGCGCAGAA
AATGGTGACGTTTCGCGGCGGGATAGATGA
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