mRNA_P-littoralis_Contig754.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig754.14.1
Unique NamemRNA_P-littoralis_Contig754.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: D8LJ70_ECTSI (Similar to chromatin modifying protein 2B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ70_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 6.830e-91
Identity = 166/213 (77.93%), Postives = 175/213 (82.16%), Query Frame = 1 
Query:    1 MFHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAPTNXXXXXXXXXXXXXXXXXXXXEQLLAQLGAL 639
            MFHKKKPDPKAAAKDA+RAVRSGERDLDKEIRNLDR+EKSLVAEIKKTAKGGN+GA RTLAKQLVQLRAQKDQLYSARAK+AGVGNAA +AAT               K+VNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVV QV+AELGLEMDGKM+DAPTN                    E+LLAQLGAL
Sbjct:    1 MFHKKKPDPKAAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKDQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPAGVARPSEAEDAKLDAKTEELLAQLGAL 213
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A835YLS1_9STRA (Chromatin modifying protein-like protein 2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.490e-40
Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 1 
Query:    1 MFHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTA-KGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAPT 546
            MF K KPDPK  A+ A+R VR GERD+++E+RNLDR EK L+ +IKKTA K G + A R LA QLV LR Q+D+LY+ ++ I  VG    + A                K VN  +S +E A ++QQFA+++E M M EE+MDDAL DAFDG+GVE E D +V+QV+ E+GL+M  KM DAPT
Sbjct:    1 MF-KAKPDPKEVARSAKRQVRQGERDVERELRNLDRVEKQLIIDIKKTARKPGGEKATRNLAGQLVGLRKQRDKLYTMKSTITAVGYQTTAIAGQAAMAGVMGSVTGAMKDVNAQLSPQEMAAVLQQFALQSETMGMREELMDDALTDAFDGDGVEAETDAIVDQVLTEIGLDMTSKMADAPT 182
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A4D9D707_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D707_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.730e-35
Identity = 80/181 (44.20%), Postives = 116/181 (64.09%), Query Frame = 1 
Query:    1 MFHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAP 543
            MF +KK  PK   ++ +R +R  ERD+D+E++NL R E  L+ +IKK A     G L+ +AK LVQLRAQKD+L + +  + GVG  A+   +                 +NE +   +T+K+M +FA +NE MN+ E+++DDAL+DAFDG+GVEEEA+ VVNQV+ E+GLE+  KM D P
Sbjct:    1 MFGQKKLTPKEQLRETKREIRHNERDMDRELQNLAREEAKLIHDIKKMAANNQHGPLKVMAKNLVQLRAQKDKLITMKTTMTGVGYKASLMHSQAAVGQAMGRMTGVMGDMNEMMDATKTSKVMTEFARQNEYMNVKEDLLDDALMDAFDGDGVEEEAESVVNQVLEEIGLELGSKMADVP 181
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A7S2EVL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVL5_TRICV)

HSP 1 Score: 132 bits (333), Expect = 1.370e-31
Identity = 87/190 (45.79%), Postives = 116/190 (61.05%), Query Frame = 1 
Query:    4 FHKKKPDPKAAAKDARRA----VRSGERDLDKEIRNLDRNEKSLVAEIKKTAKG----GNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKM--MDAP 543
            F +KKP    AAK A+R+    VR  +RD+D+EIR LDR E  ++AEIKK AK     GN  AL  LAKQLVQ+R QK++++S +A +  VG  A + A+                  N ++      KIM +F  +NE M + EE+MDDAL DAFD + VEEEA+ V NQV+AELG+E+D KM  +DAP
Sbjct:    3 FWEKKPTAAEAAKAAKRSTKREVRGAQRDMDREIRELDRTEAQVLAEIKKRAKAPGVSGNDRALSALAKQLVQIRKQKEKMFSTKANLGAVGMQATAMASQVAAASAVGNVTKAMGTANASIDAAAVGKIMTEFQRQNEIMGVREELMDDALTDAFDADEVEEEAEAVTNQVLAELGVELDSKMVGLDAP 192
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A1Z5KR86_FISSO (Charged multivesicular body protein 2B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR86_FISSO)

HSP 1 Score: 125 bits (315), Expect = 3.140e-29
Identity = 79/181 (43.65%), Postives = 114/181 (62.98%), Query Frame = 1 
Query:   13 KKPDPKAAAKDARRAVR----SGERDLDKEIRNLDRNEKSLVAEIK---KTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMM 534
            KK  PK AAK+          S + DLD+EIR LDR EK++  E+K   KTA   N   L+ LAKQ+VQ+R Q+++L++A+A++  +G  A  AA+               K  N+ +  ++T KIM +F  ENE++ + EEMMDD L+DAFD EG+EEEAD + NQV+AELG+E+D +M+
Sbjct:    5 KKETPKEAAKNXXXXXXXXXXSNQXDLDREIRELDRQEKTITVELKQRAKTASSANDPTLKALAKQMVQVRQQRNKLHTAKAQVGAMGMHATVAASQIAAVTAMGSITESMKVANKQMDIKKTTKIMAEFQRENERIQVKEEMMDDVLMDAFDSEGMEEEADQLTNQVLAELGVELDQQMV 185
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A7S2VFB0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFB0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.520e-29
Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1 
Query:   13 KKPDPKAAAKDARRAVRSGERD----LDKEIRNLDRNEKSLVAEIKKTAKGGNKGA---LRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKM--MDAP 543
            KK  PK AA  A+R            +D+EIR LDR EK +  E+K+ AKG N  +   L+TLAKQLVQ+R Q+ +L  A+A++  +G  A   A+               K  N+ ++ +ET KIM +F  ENE++ +  EMMDD L+DAFD EG+EEEAD V NQV+AELG+EMD +M  +DAP
Sbjct:    5 KKETPKEAAMKAKREXXXXXXXXXXXMDREIRELDRQEKQITMELKQRAKGANSSSDPTLKTLAKQLVQVRQQRSKLVGAKAQLGAMGMHAQVTASQVAAVQAVGSVTDAMKVANKQLNVKETTKIMTEFQRENERLAVKSEMMDDVLMDAFDSEGMEEEADQVTNQVLAELGVEMDQQMVGLDAP 190
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A7S1BMU4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMU4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.090e-28
Identity = 74/180 (41.11%), Postives = 114/180 (63.33%), Query Frame = 1 
Query:    4 FHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGG----NKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKM 531
            + K KP  K AA++ +R VRS +R +D+E+R L+R E++L+A+IKK AK G    N  AL+ L+KQLV  R QKD+L  ++++I  +   A + ++                  N+AV  ++ +  M +F  +NE M++ E++ +DAL DAFDG+ VEEEAD V +Q++AELGLE+ GKM
Sbjct:    4 WRKPKPTAKEAARETKREVRSAQRGIDRELRELERQERTLLADIKKRAKTGGITKNDSALKALSKQLVHTRGQKDRLQESKSQIGSMALKATAMSSQVAAAQAVGKVTQAMGNANQAVDIKKLSAQMGEFMRQNEMMDLKEDLFNDALADAFDGDEVEEEADAVTDQILAELGLELSGKM 183
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A024UK03_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK03_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.380e-27
Identity = 71/181 (39.23%), Postives = 104/181 (57.46%), Query Frame = 1 
Query:    4 FHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAPT 546
            F K +  P+  AK+A+R +   +R+L++E   L+R EK L+A+IKK AK GN G  + LAKQL+QLR QKD++   ++ +  +G    S A                   ++ +      K++  F  ++E M M EEM+DD LIDAFD E VE E D VV+QV+ E+GL++   M DAPT
Sbjct:    4 FGKPEKTPRERAKEAKRGIAQSQRELEREKMALERQEKQLIADIKKAAKEGNTGGTKILAKQLIQLRQQKDKMTMLKSNLGSIGLQTTSMAAQMTMVAAIEKTTKTMASTSKQMDMNRFQKVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLGSLMADAPT 184
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: A0A7S2FW30_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW30_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.240e-27
Identity = 71/179 (39.66%), Postives = 107/179 (59.78%), Query Frame = 1 
Query:   10 KKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAPT 546
            KK+P P+   +  +R  +  +RD+++EI  LDR EK LVAEIK  AK   +  ++ LAKQ+VQLRAQ+D++   +A +  VG  A++ A               X  VN  +     +K M  F  + E M + EE+MD+AL DAFD + +E+EAD +V + +AE+G+++D KM DAPT
Sbjct:    7 KKEPTPRELGRSVKRTTQKSQRDIEREIAGLDRQEKQLVAEIKVAAKKNQEKTVKILAKQVVQLRAQRDKMIGMKAHVGAVGMQASTMAATAGAMQAVGSASKAXGAVNAQMDAAGMSKAMMDFQRQIEVMGVKEELMDEALADAFDDDEIEDEADDIVARTLAEIGVDLDAKMADAPT 185
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BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Match: W4H7G6_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7G6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.150e-26
Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = 1 
Query:    4 FHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAKGGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATXXXXXXXXXXXXXXXKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVNQVMAELGLEMDGKMMDAPT 546
            F K +  P+  AK+A+R +   +R+L++E   L+R EK L+A+IK+ AK GN G  + LAKQL+QLR QKD++   ++ +  +G    S A                   N+ +      +++  F  ++E M M EEM+DD LIDAFD E VE E D VV+QV+ E+GL++   M DAPT
Sbjct:    4 FGKPEKTPREQAKEAKRGISQSQRELEREKMALERQEKLLIADIKRAAKEGNNGGTKILAKQLIQLRQQKDKMTMMKSNLGSIGLQTTSMAAQMTMVSAMEKSTKTMAATNKQMDMNRFQQVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLASLMADAPT 184
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig754.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ70_ECTSI6.830e-9177.93Similar to chromatin modifying protein 2B n=2 Tax=... [more]
A0A835YLS1_9STRA5.490e-4050.82Chromatin modifying protein-like protein 2B n=1 Ta... [more]
A0A4D9D707_9STRA3.730e-3544.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2EVL5_TRICV1.370e-3145.79Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5KR86_FISSO3.140e-2943.65Charged multivesicular body protein 2B n=2 Tax=Fis... [more]
A0A7S2VFB0_9STRA6.520e-2944.62Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1BMU4_9STRA3.090e-2841.11Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A024UK03_9STRA2.380e-2739.23Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2FW30_9STRA7.240e-2739.66Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W4H7G6_9STRA1.150e-2638.67Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig754contigP-littoralis_Contig754:24910..29801 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJ70
Preferred nameCHMP2B
PFAMsSnf7
Model size2070
Max annot lvl2759|Eukaryota
KEGG koko:K12192
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000815,GO:0000819,GO:0000920,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005829,GO:0006810,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019725,GO:0019904,GO:0022402,GO:0022411,GO:0022607,GO:0031090,GO:0031410,GO:0031982,GO:0032501,GO:0032509,GO:0032510,GO:0032886,GO:0032984,GO:0032991,GO:0033043,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040017,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044248,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046605,GO:0046755,GO:0046907,GO:0048284,GO:0048285,GO:0048518,GO:0048524,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050877,GO:0050890,GO:0051128,GO:0051179,GO:0051234,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060249,GO:0061024,GO:0061025,GO:0061763,GO:0061919,GO:0065007,GO:0065008,GO:0070050,GO:0070507,GO:0070925,GO:0071840,GO:0071985,GO:0090169,GO:0090174,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901673,GO:1902115,GO:1902186,GO:1902188,GO:1903047,GO:1903900,GO:1903902,GO:1904896,GO:1904903
Exons5
Evalue4.39e-99
EggNOG OGsCOG5491@1|root,KOG3231@2759|Eukaryota
Ec32 ortholog descriptionSnf7 family protein
Ec32 orthologEc-02_004980.1
Descriptionvacuolar transport
Cds size642
COG categoryN
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig754.14.1prot_P-littoralis_Contig754.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig754 24910..28373 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.4740322-CDS-P-littoralis_Contig754:24909..249401680791558.4740322-CDS-P-littoralis_Contig754:24909..24940Pylaiella littoralis U1_48CDSP-littoralis_Contig754 24910..24940 +
1680791558.4928594-CDS-P-littoralis_Contig754:26266..263971680791558.4928594-CDS-P-littoralis_Contig754:26266..26397Pylaiella littoralis U1_48CDSP-littoralis_Contig754 26267..26397 +
1680791558.5080543-CDS-P-littoralis_Contig754:27101..272221680791558.5080543-CDS-P-littoralis_Contig754:27101..27222Pylaiella littoralis U1_48CDSP-littoralis_Contig754 27102..27222 +
1680791558.5253658-CDS-P-littoralis_Contig754:27611..277721680791558.5253658-CDS-P-littoralis_Contig754:27611..27772Pylaiella littoralis U1_48CDSP-littoralis_Contig754 27612..27772 +
1680791558.5411458-CDS-P-littoralis_Contig754:28175..283731680791558.5411458-CDS-P-littoralis_Contig754:28175..28373Pylaiella littoralis U1_48CDSP-littoralis_Contig754 28176..28373 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791558.5526493-UTR-P-littoralis_Contig754:28373..298011680791558.5526493-UTR-P-littoralis_Contig754:28373..29801Pylaiella littoralis U1_48UTRP-littoralis_Contig754 28374..29801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig754.14.1

>prot_P-littoralis_Contig754.14.1 ID=prot_P-littoralis_Contig754.14.1|Name=mRNA_P-littoralis_Contig754.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp
MFHKKKPDPKAAAKDARRAVRSGERDLDKEIRNLDRNEKSLVAEIKKTAK
GGNKGALRTLAKQLVQLRAQKDQLYSARAKIAGVGNAAASAATTASLAGV
MGNVAGVMKQVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFD
GEGVEEEADGVVNQVMAELGLEMDGKMMDAPTNAPAGVAAPSAAEDAKLD
AKTEQLLAQLGAL*
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mRNA from alignment at P-littoralis_Contig754:24910..29801+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig754.14.1 ID=mRNA_P-littoralis_Contig754.14.1|Name=mRNA_P-littoralis_Contig754.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4892bp|location=Sequence derived from alignment at P-littoralis_Contig754:24910..29801+ (Pylaiella littoralis U1_48)
ATGTTCCACAAGAAGAAGCCCGACCCCAAAGGTGAGACTTTCACCGCCCA
TCAATACGTCCACTGCGTGCGTGTGTGCGTGTGTGCGCGTCCTTTGTGCC
TTGGGGTATTATCTTTGTACGAAGTATTTCGTTGAAAAAACGAGTGCGGT
GAGATCTGTCGCTCTCTCGCCAACCCCTCTCCGCGGGCGTCGCTGTGCGC
TTGGTCGCGCGGCGGCCTTTGATTGTAAAGCACCAAAGCCGACTGGGACG
GAACGCATCGTACGCGCATCGGTTATCATAGAGTGGAGGGCTCAAACTTG
CAGCTGCCATCTTGTTCGACGAAGTTGCAGTTGACACGTCGACACCTATC
GCGAAGCGAAATCGCGATTTCTCGAAGAATTACGCCGCAGTTTTTCTTGC
CATCGATCTGGGAAAAAGTCTCGGAGGGCGGAGGGCTCCACATCGCACGA
CGTTTGCGGGTTCTACTGCTTCTTGTTTCTCCCCCGTTTCCCCCCCCCTC
TCTCCGTGCTTGGCAAGGATGTGTTTTCAGTTTGCCCGTTTGCTTTCTCG
ATTTTTTACCCGCGGTTTGCTTCTCTCCTATTTAGCTTCCGTTCCGGTTG
GTTTACACCTCGCCTAAAACAACCAACTGTGCCCTACAGCACACTACTAT
CCCCTGCTGCTATACGGCAGCATCATCCCGCTCTTTCTTGCAGCCCACTG
CTGGCAATGTGCAATGTTGTGCCCCAGAATGCGTACGGCGGCTGCTGCAC
TTCGTATGCGCCGAGTCGAAAATATACTCGTAACTACAGTGTTGTTCATT
GGTGTCGACTGGTGTCTCTCGCGGTGCTGCCCTCGCTTGCACATTGGAGG
AACCGGCGGACCGCACTCCTTGCGTGCGTCCCCCCCTGATATATCCCTTT
GACAATGCGAAAGCGTGGTTTATAGCTGTGTGTACTCATACTGTAGGGTA
TGAGAGGACACTTGACCGACCACGCCGATGAGGGGTAGCTGTGCTGGTGT
GTGTGTTTGATTGCGTGCATCAAATCGTTACTGGTATCGTATGTTTCAGC
CCAGTTTTATGGGCTCGTTCACCTTTTCTCGCGTGCGCCCTCCTGACGAG
GAGTGCCGCTGTGTGCACACCGCCATCATCCTGGGCCGGCACAGCGTATG
TGTGTGAGTGTGTCTGTGTGTGCGTCTGTGTGTGTGCGTTTGTGTGTGTT
TGTGTGTGTGCGTGTGTGCGTGTGTGTGTTTCGTCAGTTTCCAACCATGA
CGGTCGGCGGCAACTACTGCTGCGTTGACTCTCCTCGGATGTGCCGGACG
GATACAACGACCAAACCTATTAAACTGCTCGCATCCAACTTTCCCCCAAC
CACACAGCTGCGGCGAAAGATGCGAGAAGAGCGGTGAGGTCGGGAGAGCG
AGACCTTGACAAGGAGATCCGGAACCTAGATAGAAATGAGAAGTCTCTTG
TAGCGGAGATCAAGAAGACCGCCAAAGGTGGAAACAAGGTACCGCCGTGC
TATTGAGCAATTTTCGGCTCCGGCTTTGGCTTCACCGTTACCTCTATTTT
CTTCAAGCCCCGCCCGTCTGCCCACCCTTTTGCACGATTTGCGTGCAAGA
GGCCCACGTTTTGGAATCTCCTAATGTAGATGAAAAAGAATTTTGCGCAC
AAGTGGCTTGGGACTGCCATTTAGAATTGGCAGAGGGATGAATGCTGTGG
TACCTCGGGACGAAGTCGGGCTTCCGTGATGGGTTTTGCTCGTCAATGAT
CAAACAGCCATCATGCGTGTTGCACGCCTGGGTGGTGGCGCTTGAGAGGT
TTCCTGATTAAGCTCCGCTCACATGCAGCCCCCATATGTACATGTACATG
TGGAGGAGGTCCTTGAACGGTAACAATCTTCGTCGAACAGACGACGAGGT
TCTTGCAACACAGCAGTAGTATTTGGAGCCGGAAAATGAGTCAGCTATTT
CATACCTTGTCCGAACGATACTGCTGTGACCCGGCTGTAACCACGGTATG
TGAAGTGACTGAAATGCGTACCAGGCATTAGGCATGCGTATCACGGGAGG
AATGGTCTTTGCTCGGTTTCGAAACGGGTGGAATTTTTCGACTTCGACCG
TGCGACCGAAGTAGATAAATCTAGCCCCATGATATGATCCACCGTCCCAG
CCCACCCCTCGCGGCGTCTTCGTCGTTTTCTTTTCCGACCAGGGCGCATT
ACGAACACTCGCGAAGCAGTTAGTGCAGCTGCGAGCGCAAAAGGACCAGC
TGTACTCGGCGCGGGCCAAGATAGCGGGGGTAGGAAATGCAGCCGCGTCC
GCTGCGACGACAGGTACACATTTCAACGAGTTTTGAAACATTCCTGAAAC
GGAGACGTGTGAATAGAGGCATCTGTCTCCGACAGACGCTCGAGGGAGTG
TATCCGTTCGTCTAGGTTATCCTCGGGACCCTTATCGGCCACCTTGACGG
AGGGTTGCCTAGGTTTACATTGGCACATACGAAGAGTCTCTTTGCTTGTA
TCTGTACCTCAGTTTCGTTTTTTCCCGCTCAGTCTGGACACAGGAGCAGG
GAACGCTTTCGTCAGGAATTAAAAAAAAAAATCCCAACGCCTTTCTAGGT
TTCTTGCCAATCCACTTCATACAACGAAAGCCTGTTGTCCTCAGCAGTAC
CCCCCCGCCGCTGCCGCTGCCTCCGCCGCCGCCCTTTCTCGAATCTACGC
AGCGTCGCTGGCCGGGGTCATGGGTAACGTCGCGGGTGTGATGAAGCAGG
TGAACGAAGCGGTGAGCACCGAAGAAACGGCGAAGATCATGCAGCAGTTC
GCCGTGGAGAACGAGAAGATGAACATGTCGGAGGAGATGATGGACGACGC
GCTCATCGATGCGGTGAGTGAGCGCGAGAGGTGGCTTTCATTTTTTTTTA
AACATTCTTCCAGCCACCACAGAAACTATTTTGTAAATCGCGGTACTGCT
GTAACAAAATAAAAACTGCAGCAGCGTGTCTATGACCCACCTCCATTTGG
AACCATCAAAATCCAGAGAAAACATCGCGCACACTACCCCCCCCCCAGCA
CGTAACCCGCACCCACCCTCCTCCACCGGCGTTGACTCAACGCCCCCCTC
CCCCCTCCCTTCCGATTTTGGCTGTATTCGCCCTGCGCCCCCGAATCGAC
TGACCCTGCACCCCCCCCTCCGTCACCCGCTGCCCGTTTTGGTCCCCTCC
TTCCCATCGCATCGACGTCTGGTCTCGCCCCGTCCCGTCCCGCCGCATCC
CATCCCGTCTCGCCAGTTCGACGGGGAAGGGGTAGAAGAAGAGGCCGACG
GCGTCGTGAACCAAGTCATGGCTGAGCTTGGGTTGGAGATGGACGGAAAG
ATGATGGACGCTCCCACCAACGCCCCCGCGGGCGTTGCGGCCCCGTCGGC
GGCCGAGGACGCCAAGTTAGATGCCAAGACGGAACAGTTGTTGGCGCAGC
TGGGGGCTCTTTGACGATTGATGACAGTAGCGGTTTGGGGTTCGTTTTCT
TTGGGGGAGGGTATAATATTGTGGATGTTTGTTGTGTTGGAACCGGGAAA
ACGTTTGTGACGTTCACAAAGCAGCAGCTTGGGAGCGGGCGGGGCGGGGG
CGGGGGCGCCCTTGCCCTTTTTCAGTTATTGTGGTGCGTGGCGGGCAGGA
AATCGGTTGTGGGCTCTTCGCCGCTCTGTGATTTGGGGTTGGAGGTAGTT
GACCTGTTGCTTCGTGCGACTGCTTAGGCGCTAGTTTTGGATTATCGGCG
GGCGAGGTAGAGGGCAGCGTTGTTTTGTGTCGCCGACGGGGGGGGGGGCG
GGGTAGCAATCGGATTGCAGGCGTGTAGCTCGGGCCCCGTGCGATGATCG
GTCGGCGTGAGGGTGTCAAGTGAAAGCGAGACGTTCTGTCCGTTTACGCT
TGTTTTGATCGTTTGGGAATCGGTCGGATTGCCGTTTCTAGAAGTTGCGT
GTACGACGTAGTCAGGGTCTTTTCTTGGCTGGGGGGTGCAACTCCCTCAC
AACGCCATGCCAGGCGTCTATTGGGAGCTCCTGCTCCTGCTCTTTCGGCA
TTGCAGCATCAAACTTCACTATGTATATAGGCTTCGAAGTACGAAGTATA
ACGCTGCCCATGAAAGCATTTGCACGAGGCAGTGTGGTGGCACGTACTTT
CGATTTTCATTTTTGGGTCACAACGACCCCCGCTCGTCGTGTGCATGAAG
TGCTGTATCCTCATGGTACGTTGTCCTTGAGTGTGGTGTACGTGGTCCAC
GGGCGGCAAAAAAAAACAAGCCAAACGGTAGAGGGACCCCGGCTTTTGAC
GGCGAGATATCGTACTGATCGGCTCTCCTTCGTGTGTGTTTTGTTTGGTC
GTGGCTGCCCGCGCAGATGCCTGTATACCAGGCACGCTTTTGAAAGGTCG
CACCTGATGATAGCTGATGTTTGTCGGGATAGACTATGTGTGGCATGATA
CTTTGCATTCTTCTTTAGGGTGGTCTCAGCTGGGTTGTTGCTTGGATCGG
AGGTTGTAGAGAGGGCGTGTCGGTGTATTCCCAAAGAGTGCCGCGCGAGT
TAGGCGCGAAACAATGTCCCGCCCAGCAACAACTTTTTTTCTTGTACGTG
TCTGCTCGTAAAGAGTACTACTGCTGCATCGCCGTGTTCTTGCAATTGAA
TTTGTACGTGGTGCATGCCGGTGTGCATAACGAAGAGGAAGGATAGTTTT
CAAGTGTCTCGCTGCGTGAATGTACGTGCGCACACGCAACCTTTTCTTGC
GGTGTGCGCTCGGCTATGAACAACAGTAGTATCGTAGTATCCCGGCAATG
CGCGCGAACGACGGCCAAAATAGATGGGTGAACGAATATCTACAAATACA
TAAACGATGTGCATCCCATTTCCACGTCTATCATATACCTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig754:24910..29801+

>mRNA_P-littoralis_Contig754.14.1 ID=mRNA_P-littoralis_Contig754.14.1|Name=mRNA_P-littoralis_Contig754.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig754:24910..29801+ (Pylaiella littoralis U1_48)
ATGTTCCACAAGAAGAAGCCCGACCCCAAAGCTGCGGCGAAAGATGCGAG
AAGAGCGGTGAGGTCGGGAGAGCGAGACCTTGACAAGGAGATCCGGAACC
TAGATAGAAATGAGAAGTCTCTTGTAGCGGAGATCAAGAAGACCGCCAAA
GGTGGAAACAAGGGCGCATTACGAACACTCGCGAAGCAGTTAGTGCAGCT
GCGAGCGCAAAAGGACCAGCTGTACTCGGCGCGGGCCAAGATAGCGGGGG
TAGGAAATGCAGCCGCGTCCGCTGCGACGACAGCGTCGCTGGCCGGGGTC
ATGGGTAACGTCGCGGGTGTGATGAAGCAGGTGAACGAAGCGGTGAGCAC
CGAAGAAACGGCGAAGATCATGCAGCAGTTCGCCGTGGAGAACGAGAAGA
TGAACATGTCGGAGGAGATGATGGACGACGCGCTCATCGATGCGTTCGAC
GGGGAAGGGGTAGAAGAAGAGGCCGACGGCGTCGTGAACCAAGTCATGGC
TGAGCTTGGGTTGGAGATGGACGGAAAGATGATGGACGCTCCCACCAACG
CCCCCGCGGGCGTTGCGGCCCCGTCGGCGGCCGAGGACGCCAAGTTAGAT
GCCAAGACGGAACAGTTGTTGGCGCAGCTGGGGGCTCTTTGA
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