prot_P-littoralis_Contig753.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig753.16.1
Unique Name	prot_P-littoralis_Contig753.16.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	477

Homology

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 3.800e-52
Identity = 316/466 (67.81%), Postives = 320/466 (68.67%), Query Frame = 0

Query:   16 AVEDLPASALHPLIHSFLSECGLSATAAALREETGKSSKKLAKGQKSLGEGCNDLLEIVNLHRKRHAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGKNLSTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRKVEPAPVQDSSSXXXXXXXXXXXXXXXXXXXXXXXXXDDCSSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVPKVLTPYKGPA---SNGVANG-GMKTPVKGAEEEAGAEANXXXXXXXXXXXXXXX-SRTQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 476
            AVEDLPASALHPL+HSFL ECGLSATAAALREETGKSSKKL K Q +LG GC DLLEIVN HRKR AA                     XXXXXXXX                                                          G    +  KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WVPK LTP K      SNGVANG GMKTP KG          XXXXXXX         SRTQGEAFKRVQD+ WVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:    9 AVEDLPASALHPLVHSFLLECGLSATAAALREETGKSSKKLGKQQAALGGGCKDLLEIVNAHRKRLAAEAAKAGGDDVQEDMEHTKKESXXXXXXXXK---------------------------------------------------------GKANGVKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVPKALTPNKAGXXGDSNGVANGDGMKTPAKGGXXXXXXXXXXXXXXXXTGKKSTGGKSRTQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 411

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.510e-50
Identity = 113/143 (79.02%), Postives = 116/143 (81.12%), Query Frame = 0

Query:  338 AWVPKVLTPYK--GPASNGVANG-GMKTPVKGAE-EEAGAEANXXXXXXXXXXXXXXXSRTQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 476
            AWVPK LTP K  G  SNGVANG GMKTP KG +         XXXXXXX        SR+QGEAFKRVQD+ WVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:  378 AWVPKDLTPNKAGGGVSNGVANGDGMKTPAKGGQGXXXXXXXXXXXXXXXGKKSTGGKSRSQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 520

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S3Y1Y8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y8_HETAK)

HSP 1 Score: 104 bits (259), Expect = 8.270e-22
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 0

Query:  393 RTQGEAFKRVQDDNWVGGLKK-GFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 475
            R QGEAFKRV  D W   +K     DN+YEGTFG  GYG KASE L KVRGKDFRHEKTKKKRG+YRGG+I++ S S+KF +SD
Sbjct:  158 RVQGEAFKRVCSDTWGSAIKHDALKDNSYEGTFGGDGYGAKASEVLLKVRGKDFRHEKTKKKRGNYRGGQITLASNSIKFANSD 241

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A4D9D037_9STRA (SRP40_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D037_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.120e-20
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0

Query:  393 RTQGEAFKRVQDDNWVGGLKKG-FDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFD 472
            R  GEAF+RV D+ W   +K     DN+Y GTFG GGYG KASEKL  VRGKDFRHEKTKKKRGSYRGG IS+ S+S+K+D
Sbjct:  391 RVSGEAFRRVDDEYWGQQIKDDRLKDNSYAGTFGSGGYGAKASEKLMTVRGKDFRHEKTKKKRGSYRGGTISLESHSIKYD 471

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A836CH62_9STRA (SRP40, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH62_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.990e-20
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0

Query:  396 GEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDD 473
            GEAF+RV+D+ WV  L  G D N YE TFGQ GYG+KA + L  VRGKDFRHEKTKKKRGSYRGG I+M S S KFD+
Sbjct:  443 GEAFRRVKDEEWVDKLANGTDTNHYEDTFGQDGYGYKAHQVLINVRGKDFRHEKTKKKRGSYRGGTITMASNSFKFDE 520

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A061RD47_9CHLO (SRP40_C domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD47_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.020e-19
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0

Query:  394 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 475
            T  +AF+RV+++ W+G  KKG  DN+Y GTFG  G+G+KA E L KVRGKDFRHEKTKKKRGSYRGG+I + S S KF+  D
Sbjct:  201 TAXKAFQRVREEEWIG--KKGSWDNSYTGTFGAQGWGYKAQEVLGKVRGKDFRHEKTKKKRGSYRGGKIELGSNSFKFESDD 280

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A8JCQ6_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JCQ6_CHLRE)

HSP 1 Score: 94.0 bits (232), Expect = 1.620e-19
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 0

Query:  394 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 475
            T G+AF+RV+ + W+G  KKG  DN YE TFGQ G+G+KA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:   34 TAGKAFQRVKAEEWLG--KKGAIDNRYEATFGQAGWGYKAQQVLGAVRGKDFRHEKTKKKRGSYRGGNIDPHATFSTKFESDD 114

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S1T5X8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5X8_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 5.550e-19
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0

Query:  394 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEI-SMNSYSVKFDDSD 475
            T  +AF+RV+++ W+G  KKG  DN+Y GTFGQ G+G+KA E L KVRGKDFRHEKTKKKRG+Y+GG+I +M S S+KF+  D
Sbjct:  208 TAAKAFQRVKEEEWLG--KKGAWDNSYVGTFGQDGWGYKAQEVLGKVRGKDFRHEKTKKKRGTYKGGKIDNMGSNSIKFESDD 288

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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S3QVY0_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QVY0_DUNTE)

HSP 1 Score: 98.6 bits (244), Expect = 8.080e-19
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 0

Query:  397 EAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 475
            +AF+RV+ + W+G  KKG  DN+YEGTFGQ G+GFKA + L  VRGKDFRHEKTKKKRG+YRGG I  +S+S KFD  D
Sbjct:  304 KAFQRVKAEEWLG--KKGAWDNSYEGTFGQDGWGFKAQQALGAVRGKDFRHEKTKKKRGTYRGGVIDGSSHSYKFDSDD 380

[Close]

BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A150FVM7_GONPE (SRP40_C domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FVM7_GONPE)

HSP 1 Score: 97.8 bits (242), Expect = 1.700e-18
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 0

Query:  394 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 475
            T  +AF+RV+ + W+G  KKG  DN+YEGTFGQGG+GFKA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:  313 TAAKAFQRVKAEEWLG--KKGAIDNSYEGTFGQGGWGFKAQQVLGAVRGKDFRHEKTKKKRGSYRGGAIDPHATFSTKFESDD 393

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FH06_ECTSI	3.800e-52	67.81	LisH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JYW0_9PHAE	1.510e-50	79.02	LisH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A7S3Y1Y8_HETAK	8.270e-22	66.67	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9D037_9STRA	2.120e-20	66.67	SRP40_C domain-containing protein n=1 Tax=Nannochl...	[more]
A0A836CH62_9STRA	4.990e-20	67.95	SRP40, C-terminal domain-containing protein n=1 Ta...	[more]
A0A061RD47_9CHLO	1.020e-19	62.20	SRP40_C domain-containing protein n=1 Tax=Tetrasel...	[more]
A8JCQ6_CHLRE	1.620e-19	60.24	Predicted protein n=1 Tax=Chlamydomonas reinhardti...	[more]
A0A7S1T5X8_9CHLO	5.550e-19	61.45	Hypothetical protein n=1 Tax=Tetraselmis chuii Tax...	[more]
A0A7S3QVY0_DUNTE	8.080e-19	64.56	Hypothetical protein n=1 Tax=Dunaliella tertiolect...	[more]
A0A150FVM7_GONPE	1.700e-18	62.65	SRP40_C domain-containing protein n=1 Tax=Gonium p...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 21..53 e-value: 6.4E-4 score: 29.0
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 21..53 score: 9.591198
IPR007718	Srp40, C-terminal	PFAM	PF05022	SRP40_C	coord: 399..471 e-value: 2.7E-24 score: 85.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..332
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 6..474

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig753	contig	P-littoralis_Contig753:39533..44813 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig753.16.1	mRNA_P-littoralis_Contig753.16.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig753 39328..45731 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig753.16.1 ID=prot_P-littoralis_Contig753.16.1|Name=mRNA_P-littoralis_Contig753.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp
MAPASSSSSSSAAAAAVEDLPASALHPLIHSFLSECGLSATAAALREETG
KSSKKLAKGQKSLGEGCNDLLEIVNLHRKRHAAAAAGEEENDVEVDMELT
KKVKRAKAAAAAAAEVVASSSSSSSSSSSSSSSSSSSSSSSSEEEEEQEE
KESDGDESSDEEEKEKPKANGSGKNLSTKKKKAVAAVAAADSSSSSSSSD
DDDDDDDDDDDDGDEESGEENEKEVEEKRPSKKRKAPAAEESAEEEEEEE
KKEKKLPPAKRRKVEPAPVQDSSSSSSSSSDSSDSSDSDSSDSSDSSDSD
DCSSSDEETDEEQEAKRAVVKASAEKERRKSSAAAAAAWVPKVLTPYKGP
ASNGVANGGMKTPVKGAEEEAGAEANGGEGASSTGKKSTGKSRTQGEAFK
RVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKT
KKKRGSYRGGEISMNSYSVKFDDSDG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006594	LisH
IPR007718	Srp40_C