mRNA_P-littoralis_Contig753.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig753.16.1
Unique NamemRNA_P-littoralis_Contig753.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.150e-50
Identity = 316/466 (67.81%), Postives = 320/466 (68.67%), Query Frame = 2 
Query:  251 AVEDLPASALHPLIHSFLSECGLSATAAALREETGKSSKKLAKGQKSLGEGCNDLLEIVNLHRKRHAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGKNLSTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRKVEPAPVQDSSSXXXXXXXXXXXXXXXXXXXXXXXXXDDCSSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVPKVLTPYKGPA---SNGVANG-GMKTPVKGAEEEAGAEANXXXXXXXXXXXXXXX-SRTQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 1633
            AVEDLPASALHPL+HSFL ECGLSATAAALREETGKSSKKL K Q +LG GC DLLEIVN HRKR AA                     XXXXXXXX                                                          G    +  KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WVPK LTP K      SNGVANG GMKTP KG          XXXXXXX         SRTQGEAFKRVQD+ WVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:    9 AVEDLPASALHPLVHSFLLECGLSATAAALREETGKSSKKLGKQQAALGGGCKDLLEIVNAHRKRLAAEAAKAGGDDVQEDMEHTKKESXXXXXXXXK---------------------------------------------------------GKANGVKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVPKALTPNKAGXXGDSNGVANGDGMKTPAKGGXXXXXXXXXXXXXXXXTGKKSTGGKSRTQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 411
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.420e-49
Identity = 113/143 (79.02%), Postives = 116/143 (81.12%), Query Frame = 2 
Query: 1217 AWVPKVLTPYK--GPASNGVANG-GMKTPVKGAE-EEAGAEANXXXXXXXXXXXXXXXSRTQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 1633
            AWVPK LTP K  G  SNGVANG GMKTP KG +         XXXXXXX        SR+QGEAFKRVQD+ WVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:  378 AWVPKDLTPNKAGGGVSNGVANGDGMKTPAKGGQGXXXXXXXXXXXXXXXGKKSTGGKSRSQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 520
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S3Y1Y8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y8_HETAK)

HSP 1 Score: 106 bits (265), Expect = 4.360e-22
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 2 
Query: 1382 RTQGEAFKRVQDDNWVGGLKK-GFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 1630
            R QGEAFKRV  D W   +K     DN+YEGTFG  GYG KASE L KVRGKDFRHEKTKKKRG+YRGG+I++ S S+KF +SD
Sbjct:  158 RVQGEAFKRVCSDTWGSAIKHDALKDNSYEGTFGGDGYGAKASEVLLKVRGKDFRHEKTKKKRGNYRGGQITLASNSIKFANSD 241
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A4D9D037_9STRA (SRP40_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D037_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.990e-20
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 2 
Query: 1382 RTQGEAFKRVQDDNWVGGLKKG-FDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFD 1621
            R  GEAF+RV D+ W   +K     DN+Y GTFG GGYG KASEKL  VRGKDFRHEKTKKKRGSYRGG IS+ S+S+K+D
Sbjct:  391 RVSGEAFRRVDDEYWGQQIKDDRLKDNSYAGTFGSGGYGAKASEKLMTVRGKDFRHEKTKKKRGSYRGGTISLESHSIKYD 471
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A061RD47_9CHLO (SRP40_C domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD47_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 5.060e-20
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 2 
Query: 1385 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 1630
            T  +AF+RV+++ W+G  KKG  DN+Y GTFG  G+G+KA E L KVRGKDFRHEKTKKKRGSYRGG+I + S S KF+  D
Sbjct:  201 TAXKAFQRVREEEWIG--KKGSWDNSYTGTFGAQGWGYKAQEVLGKVRGKDFRHEKTKKKRGSYRGGKIELGSNSFKFESDD 280
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A836CH62_9STRA (SRP40, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH62_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.650e-20
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 2 
Query: 1391 GEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDD 1624
            GEAF+RV+D+ WV  L  G D N YE TFGQ GYG+KA + L  VRGKDFRHEKTKKKRGSYRGG I+M S S KFD+
Sbjct:  443 GEAFRRVKDEEWVDKLANGTDTNHYEDTFGQDGYGYKAHQVLINVRGKDFRHEKTKKKRGSYRGGTITMASNSFKFDE 520
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A8JCQ6_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JCQ6_CHLRE)

HSP 1 Score: 96.3 bits (238), Expect = 5.790e-20
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 2 
Query: 1385 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 1630
            T G+AF+RV+ + W+G  KKG  DN YE TFGQ G+G+KA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:   34 TAGKAFQRVKAEEWLG--KKGAIDNRYEATFGQAGWGYKAQQVLGAVRGKDFRHEKTKKKRGSYRGGNIDPHATFSTKFESDD 114
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S1T5X8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5X8_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 2.680e-19
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 2 
Query: 1385 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEI-SMNSYSVKFDDSD 1630
            T  +AF+RV+++ W+G  KKG  DN+Y GTFGQ G+G+KA E L KVRGKDFRHEKTKKKRG+Y+GG+I +M S S+KF+  D
Sbjct:  208 TAAKAFQRVKEEEWLG--KKGAWDNSYVGTFGQDGWGYKAQEVLGKVRGKDFRHEKTKKKRGTYKGGKIDNMGSNSIKFESDD 288
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A7S3QVY0_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QVY0_DUNTE)

HSP 1 Score: 100 bits (250), Expect = 4.710e-19
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 2 
Query: 1394 EAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 1630
            +AF+RV+ + W+G  KKG  DN+YEGTFGQ G+GFKA + L  VRGKDFRHEKTKKKRG+YRGG I  +S+S KFD  D
Sbjct:  304 KAFQRVKAEEWLG--KKGAWDNSYEGTFGQDGWGFKAQQALGAVRGKDFRHEKTKKKRGTYRGGVIDGSSHSYKFDSDD 380
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BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Match: A0A150FVM7_GONPE (SRP40_C domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FVM7_GONPE)

HSP 1 Score: 100 bits (248), Expect = 1.000e-18
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 2 
Query: 1385 TQGEAFKRVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 1630
            T  +AF+RV+ + W+G  KKG  DN+YEGTFGQGG+GFKA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:  313 TAAKAFQRVKAEEWLG--KKGAIDNSYEGTFGQGGWGFKAQQVLGAVRGKDFRHEKTKKKRGSYRGGAIDPHATFSTKFESDD 393
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig753.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH06_ECTSI1.150e-5067.81LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JYW0_9PHAE4.420e-4979.02LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3Y1Y8_HETAK4.360e-2266.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D037_9STRA2.990e-2066.67SRP40_C domain-containing protein n=1 Tax=Nannochl... [more]
A0A061RD47_9CHLO5.060e-2062.20SRP40_C domain-containing protein n=1 Tax=Tetrasel... [more]
A0A836CH62_9STRA5.650e-2067.95SRP40, C-terminal domain-containing protein n=1 Ta... [more]
A8JCQ6_CHLRE5.790e-2060.24Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A7S1T5X8_9CHLO2.680e-1961.45Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S3QVY0_DUNTE4.710e-1964.56Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A150FVM7_GONPE1.000e-1862.65SRP40_C domain-containing protein n=1 Tax=Gonium p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig753contigP-littoralis_Contig753:39328..45731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FH06
Preferred nameSRP40
PFAMsSRP40_C
Model size2554
Max annot lvl2759|Eukaryota
KEGG koko:K10771,ko:K11294
KEGG Pathwayko03410,ko05130,map03410,map05130
KEGG ModuleM00296
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016893,GO:0016895,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046907,GO:0050896,GO:0051169,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0052720,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360
Exons7
Evalue6.23e-53
EggNOG OGsKOG2992@1|root,KOG2992@2759|Eukaryota
Ec32 ortholog descriptionSRP40, C-terminal
Ec32 orthologEc-26_003010.1
EC4.2.99.18
DescriptionRNA polymerase I core binding
Cds size1431
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig753.16.1prot_P-littoralis_Contig753.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig753 39533..44813 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791557.2818444-UTR-P-littoralis_Contig753:39327..395321680791557.2818444-UTR-P-littoralis_Contig753:39327..39532Pylaiella littoralis U1_48UTRP-littoralis_Contig753 39328..39532 +
1680791557.3943715-UTR-P-littoralis_Contig753:44813..457311680791557.3943715-UTR-P-littoralis_Contig753:44813..45731Pylaiella littoralis U1_48UTRP-littoralis_Contig753 44814..45731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791557.297317-CDS-P-littoralis_Contig753:39532..396341680791557.297317-CDS-P-littoralis_Contig753:39532..39634Pylaiella littoralis U1_48CDSP-littoralis_Contig753 39533..39634 +
1680791557.3086863-CDS-P-littoralis_Contig753:40341..404191680791557.3086863-CDS-P-littoralis_Contig753:40341..40419Pylaiella littoralis U1_48CDSP-littoralis_Contig753 40342..40419 +
1680791557.321824-CDS-P-littoralis_Contig753:40956..415651680791557.321824-CDS-P-littoralis_Contig753:40956..41565Pylaiella littoralis U1_48CDSP-littoralis_Contig753 40957..41565 +
1680791557.3338945-CDS-P-littoralis_Contig753:42046..421961680791557.3338945-CDS-P-littoralis_Contig753:42046..42196Pylaiella littoralis U1_48CDSP-littoralis_Contig753 42047..42196 +
1680791557.35471-CDS-P-littoralis_Contig753:42406..425641680791557.35471-CDS-P-littoralis_Contig753:42406..42564Pylaiella littoralis U1_48CDSP-littoralis_Contig753 42407..42564 +
1680791557.3684886-CDS-P-littoralis_Contig753:43187..433531680791557.3684886-CDS-P-littoralis_Contig753:43187..43353Pylaiella littoralis U1_48CDSP-littoralis_Contig753 43188..43353 +
1680791557.382853-CDS-P-littoralis_Contig753:44645..448131680791557.382853-CDS-P-littoralis_Contig753:44645..44813Pylaiella littoralis U1_48CDSP-littoralis_Contig753 44646..44813 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig753.16.1

>prot_P-littoralis_Contig753.16.1 ID=prot_P-littoralis_Contig753.16.1|Name=mRNA_P-littoralis_Contig753.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp
MAPASSSSSSSAAAAAVEDLPASALHPLIHSFLSECGLSATAAALREETG
KSSKKLAKGQKSLGEGCNDLLEIVNLHRKRHAAAAAGEEENDVEVDMELT
KKVKRAKAAAAAAAEVVASSSSSSSSSSSSSSSSSSSSSSSSEEEEEQEE
KESDGDESSDEEEKEKPKANGSGKNLSTKKKKAVAAVAAADSSSSSSSSD
DDDDDDDDDDDDGDEESGEENEKEVEEKRPSKKRKAPAAEESAEEEEEEE
KKEKKLPPAKRRKVEPAPVQDSSSSSSSSSDSSDSSDSDSSDSSDSSDSD
DCSSSDEETDEEQEAKRAVVKASAEKERRKSSAAAAAAWVPKVLTPYKGP
ASNGVANGGMKTPVKGAEEEAGAEANGGEGASSTGKKSTGKSRTQGEAFK
RVQDDNWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKT
KKKRGSYRGGEISMNSYSVKFDDSDG*
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mRNA from alignment at P-littoralis_Contig753:39328..45731+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig753.16.1 ID=mRNA_P-littoralis_Contig753.16.1|Name=mRNA_P-littoralis_Contig753.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6404bp|location=Sequence derived from alignment at P-littoralis_Contig753:39328..45731+ (Pylaiella littoralis U1_48)
ACCATTATCCTCCATCTTGCGGTGTGTTGCTGCGTGTGCCTGAAACTGCC
GTAAGCCACAACACGTCCTGATTGTCGGTCGGTCGTGGCTTGTAAGATAG
ACCAGAGCCTCCACTCACGAGTTTAGCAGCACACCCCAAACCCTCAAACA
CCAACAACACCCACTACACGAAGACCCTTTTACCAATTACTCTCTCGTGG
TAGCCATGGCTCCGGCATCATCATCATCATCATCATCAGCAGCAGCAGCA
GCAGTTGAGGACCTCCCGGCCAGTGCTCTCCACCCTCTGATCCACTCCTT
CCTCTCGGTGAGACGTGAGCTATATATGTGCGTGTTCCAGGAGTTTGAGC
CGAAGCTCTCATTTCTAGTTGTGCTGTCGGCTTTTCTGGTTGACCTCGAG
AACCTTTCTTGGAGGAGGTTACCCTATCATATTATACTTCGAAGCATACT
GCTGCTGTACTGAGCGATTTCCAGCCGCGCAGTTTACTACAGTCTCGTGG
ACAACCAAACCAATCCATGTATGTGTGTTCGTCTGCTTGGTTGCATTGAT
TTCGGTGCGAGAGCCTTGGTGAAAGCAGGAATTCTTTGTCATGCACGCTG
CCGAGTCAATTTGTTTCTTCCTCTTGCTTCACGGAGGTTTTACACGAGAG
GCACTGGTTCCTTCTGTGGACCAGTCTTGATCATGAACGTTTACTCGTAT
CATGTGATACGATAATGTGATGCGATAGACCACACCATCTGCCACGGCGG
TGCAGATACAAGTTAACCTTGAAGTGACTCGTCTACCGGAGCAGTGCCTT
TCGTGTAAACCTGAGCATCGAGCCAAGACTAATGTGGCGGGAATGTGCCT
CTTGACAGGTTTCCGGCCACGACCAAGAGACTCGAACCGAAACCACGTCA
ACGAAGCCGGCGTTCGTTTCGTTTTTTGTTTATATTTTTTTATGTCAACA
TGATGGCCTGATGGTTTTTCTCTTCTTTCTCTTTCTCTTCTATATCTCTT
TTTCGTTATGCCAGGAGTGCGGACTTTCGGCCACAGCGGCAGCCCTACGC
GAGGAGACCGGCAAGAGCTCGAAAAAGCTCGCAAAAGGACAGGTGTGTTT
GGATGTTTTTGCTTGGGCCGTGTTTGTGTTTTGAGTTCAAGCGCGTGTGC
GCAAATTTCTCCATGGTTTGGTGTATCGTGGATGGTTGGTATTTTTTTTC
TGGAGAGGGGGGGGGGGCTGAAAAAGTAAAATGCCCCCTTAAAGGTTTGC
CGAATCCCAATGCCAGTCTTGGTCGTTTCATCATTTTATGAGAAGAGGAA
ATATAAGTAGGGCTCTTTGAGGTTTTTTCTTTGTATGGAGAGCGTGCGGC
GTGTACACTTCTCTACCCTCTGCGCCTGCGCACGTCTGTCTATCTACTGC
CCGACAACTCGCCAAGCCTGTTGTCAAGCCTTGGCTACATGTGCCCCTTC
TCACTGCTGCTGCTGCTAGTTGCTGCTGTTGGTTGCTGCTGCGCAGCGTA
CACGCTCGTAGAAATCTTATTAATACTGTCATGTTTTGATTGTCGTTAGC
TGAAGTCTATCCCCCCTCCCGGCTGGTTCGTCTGATACACTTCCTGGCGG
CAAACTACACTGCTGTACGCACGGCACAGAAGTCGTTGGGTGAGGGTTGC
AACGACCTTCTAGAGATTGTGAACCTTCACCGCAAGCGTCACGCGGCGGC
AGCGGCGGGGGAGGAAGAAAATGATGTAGAAGTAGACATGGAACTTACCA
AGAAGGTAAAGAGAGCTAAGGCGGCGGCCGCAGCCGCGGCCGAGGTGGTG
GCTTCTTCTTCATCTTCATCTTCTTCTTCATCATCATCATCATCGTCATC
ATCATCATCATCCAGCAGCAGCAGTGAGGAGGAGGAAGAGCAAGAGGAAA
AAGAAAGTGATGGCGACGAAAGCAGTGACGAGGAGGAGAAGGAAAAGCCC
AAGGCTAACGGTAGCGGGAAGAATTTGTCGACAAAAAAGAAAAAGGCCGT
GGCGGCGGTAGCGGCTGCTGACTCTAGCAGCAGCAGCAGCAGCAGCGATG
ATGATGATGATGATGATGATGATGATGATGACGATGGTGATGAAGAAAGC
GGAGAAGAAAATGAAAAGGAGGTGGAGGAAAAGCGGCCGAGTAAGAAGAG
GAAGGCGCCGGCAGCTGAAGAATCTGCGGAAGAGGAGGAGGAGGAAGAGA
AAAAGGAGAAAAAGCTACCGCCCGCCAAGCGGAGAAAGGTATGAGACTAC
TCGCGGGTTTCACCCCCCGGGGTACGTACGTGAGAGGTGGGTTGTGGTTG
CCGACGTTCTCATGAGGCTGTACTGTACAGTAGCAAGGATAGGTTTTATG
GTGTGGCGCGCCAAGGTTGATTTGAGAGTCTTCTGTGAAGCCCGATGTAG
AACGGTTGCGCGAATCGCTCTTGTGTCAATACTCTATCTACCCCCCCCCC
CACCCTCCCCCCCCTTCCTCCATCATTTCACTGTAGGAAACAAAATTTAC
TCCCGGAATTTACACACGATGCGGTGCGGGTAGGTCACCCAAAGACGATA
AAAAATACACCAGCAGAGGAGCACACCGACCGCTCCTGACCCAAATACCA
AATAATAATTGGCATGTACATTCTCGCAATGCTCTGGAGCTCACTACCAG
CCGCAACAACAAGTTCCCGACGAAACGCCTCACCTCGTTTTTCCTCTTGC
TTTCCACGCTGTGTTGCAGGTGGAACCTGCTCCCGTTCAAGATAGCAGCA
GCAGCAGCAGCAGCAGCAGTGACAGCAGTGACAGCAGTGACAGCGATAGC
AGCGATAGCAGCGATAGCAGCGACAGCGACGATTGTTCCTCCTCGGACGA
AGAGACGGACGAAGAACAGGTGGGCAACAAAGCGAAAAAACTTCATTTTT
TCACTGCATGTATGTTTTATGTTTTCTTGTTTCCCTCGTTCCGTTCATTT
ATGTGTTTGTCGTTCCGTTTATTATTTACATCGTATTGTTTCGTTCTGTT
AGTGGTTTGGTTTGTGTTGTACCGTTGTCGACCTGTTTTTTCCGTCCACA
ACGTGCACAACGTGCCGTCGCCGTTTCAGGAAGCTAAAAGAGCGGTCGTG
AAAGCGTCGGCGGAGAAAGAGCGACGGAAATCCTCCGCGGCCGCCGCAGC
GGCGTGGGTTCCGAAGGTCCTGACGCCCTACAAAGGCCCCGCCTCCAACG
GCGTTGCCAACGGTGGCATGAAGACGCCGGTAAAGGGGTGAGCGTCGAAG
AAAAAAATCCCTGGTACATCATAGCTCTTTGTTGTCGGTCGGCTGATTGT
TTGGGAATGCGTGCGTGCGCACACAAGGCACTACTCAACGTGTGTAAGTT
GTCTTGACATTGAAAATATTTCCTTCCTCTGCCCAGTACCTTTTGATGTT
CATGCTGTTGACTCATGAGACATGGGGGGAACGATTTCTATGGTTACAGG
GCTAATACCTCCTTTCAAAAGACCAAAGGGCGTGTCAAGAGACAACGTCT
TGTCCTCTCAAAAATAGAGGGTACGGTAGTGACCGTTCGTTGCGCAAGGA
CATCCGACGGATGTACAAAACGTAGTCCCCCAGAGATCACACCACGCGAC
CAAAATATTTTACCTGGTGCGAAATACCGGCACTACCGTACAGTAGTAAT
CGTAATCGCGGGCACGCATGCTCGAGGTTGCTGTGAAGCACGAAGGCTGC
AGTCTCGGGGGTGACGTCAAAAACGTCAACCACGCAGTCACGAGCGAAAG
CATGGTAAATGTGCAATTACAAACTAAATGCTGCTGCCGTTGGCCACGCC
GACCGCCGATGCGTATGCGTGTGTGTGTGTGTGTTCGTGGTGCACCCGCT
GCATTTGCAGCGCGGAGGAGGAGGCAGGGGCGGAGGCTAACGGAGGCGAG
GGCGCGAGCAGCACCGGAAAGAAATCGACGGGGAAGTCAAGGACGCAGGG
AGAAGCGTTCAAGAGGGTCCAGGACGACAACTGGGTCGGGGGTCTGAAGA
AAGGGTTCGACGACAACACCTACGAGGTGTCTGTGTGTCTTGCGTGTCTT
GTGTGTCTTGTGTGCGTGTTGTTTGATTGACGTGTGGAGGAGACCGCGCG
GACGGGCGGACTGACCAACGAGGAAGTGCCAGTTTTCTGTGGCAGGTGGG
AAACCAAAAAGTTGTCCTGAACCCCGGGGGGGGGGCGGGTCTCCCCTCCA
GCAAAGGAAACTTTTTTTTCCCGTGCTTCTATCTCTTCGTCATTTACACA
TTTGAAAATCTGTTCCGAATTCAGTTACACTGCTGTTGCTGCTGACTTTA
TTTTTTTTTCGCCTTTATGATTTGTGTCTGTGTGCTTTTGTCGCTCCTCA
CGTCTGGCCCTGTTTTGGCACTTTGTGTGCTGGGTGGACGTTCAACGACT
CCACCCCTTGCCTCGCCTGAGTATTGTCAAGAAACGCCTCCTCTCACATC
AGACACATTGCACTTCGAAGTACGCCACATACACACACCCGTCCTCCACA
TTTCCTTCATAATCCCTCCAAATCCCTCCAAATCCGTGCGGAACAGCGCG
CATCGGGCCAAGGACCGCATGGGTTCAAGGCTTCACATGTTTTCGTGCCG
AGTATGCCCCCCACTTCGTTTTCACACTGTACTGTACGTAGCTTTGATTT
TCAAAGCTGCTTGTTACTGCCGAACTTTTCTTTCTTTGGGATTCGTACCC
CCTCCCCCCTTCCCCAACTTATACGGAAGACCCCCCCTTCCCACCCCCCA
AACAACGACGGCCCTGTCGCACACATCAGGCAGTAGCACCAAGCGGACTT
CGTCCCCTGGAGGACTCTACTCTCGACCAAATCGCACCACAGTGTCCAGC
CTGAATTTGCCGCTAATTCCGGCTGGAATCCTGTTGGGTTTGACCAGTCT
GATTTAGGAATTCGATCCAAACTCTGCGGCCGAAATTTCGCCGCAGAGAT
AAACAGCGCCCTCACACTTTTCCCTCGCCAACACCAAACCACAAGGAGGT
GGCGCGCTGCAGTAGACTATAGTAACGATTGGTATCCCCTGGGGCCAAAA
GTCTGCCTCTGGGCTGTCGCCTTTGCGTTCAAGCTGCTGTTTTTGGCTAC
GTTTGGGCTCTCTTGGGATTTCTGAGCGGGGAGGTTTTATCAGAACAAAA
AATGACCTTAACAAGAAACAACCTTCTTTTCGTTTCGTTGTTGACATCGA
CACCGGTCACGCTAGTAGTACCCCCCCCCCCCCTCCCCTCCCCTGCCCTC
CCCCCCCTCTCACGCCCCCTCCCCTTGGCGCCGCTACATATCACACCTCG
GTTTTTGTGGCGTGACAGGGCACGTTTGGACAGGGAGGGTACGGGTTCAA
GGCTAGCGAGAAGCTTTCGAAGGTGCGAGGGAAGGACTTCCGACACGAGA
AAACCAAGAAGAAGCGCGGCAGCTACCGGGGGGGAGAGATATCGATGAAC
AGCTACTCGGTCAAGTTCGACGACAGCGACGGATGATGACTCATCATATG
GTGGTGGCGATGGTGGTGGTGATGATGATGATGATGATGATGATGGTGGT
GAAAAAGCGATACAGTGGTGGTGATGACATGATGGTTATAGTGATGACAT
GATGATTATGAAGTCGTGATGGGTGATCGATAGGTGGGATGAAGGCGAAT
TATTGCTTTGTTACCCTACTGCTGTAGAGTATATGTAGTATTTTGCCCAA
TGGCCAAGCACGCATATCATGCAATGCCAGGACGGAGCCATGCGTGATCG
AGATTACACCGATCAGGCACATGCAAGCACCAAGAAGCACGAGTCGCGCA
GAGTTTGGGGGCTGCGCCGTTCTGGGTGATGAGGGTGCGGAGATGATCAC
CGGAAATTGTGCCAGCGGTCGGATCGAGACAGAAGATGTAAATCGAGTTA
CTTTTTTACAGCGCTGTGACATACCACCTACCGGGGCTTGCAATGTTCTG
CGGAATTGTGAGATGGCGCGGCAGTCCTCACGCACGCGTGAAAACGCTCG
ATCCTCACACGGAAGCAATGCAGTCCTGAGTGTGGGTCTCCTCTGTTGCA
GCAGTACTGCCGCTGTGCGGTTTGGTTTGTGTGTCTGGAATGCTCTCAAC
GCTGCTCAAGAACGGCAAAACTTGGTAGTTTTCGTCAAGGCCTGCAATGC
GGTGGGCGAAGAGGCGGCTTGACTTATGGACGTGGGAGTACAGCCGCGGT
TTGGTTCTGCGCGGCACTTTCGAGGATGGAAGCATGCTGTTTTTTGTGTG
TATGGTTCAATAGTAACGCCTTTTTCCCGCTGTATAACTCCCTCTAAGAA
TCGCAAAATGCCCTCCCGCTGTCACAAGATTGAGAGTTGGCTGCGACACG
GCGTGCTCCGTGAATGAGATACGGAGGCATCCCGTGCTTTTTTGTGAATG
GCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig753:39328..45731+

>mRNA_P-littoralis_Contig753.16.1 ID=mRNA_P-littoralis_Contig753.16.1|Name=mRNA_P-littoralis_Contig753.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig753:39328..45731+ (Pylaiella littoralis U1_48)
ATGGCTCCGGCATCATCATCATCATCATCATCAGCAGCAGCAGCAGCAGT
TGAGGACCTCCCGGCCAGTGCTCTCCACCCTCTGATCCACTCCTTCCTCT
CGGAGTGCGGACTTTCGGCCACAGCGGCAGCCCTACGCGAGGAGACCGGC
AAGAGCTCGAAAAAGCTCGCAAAAGGACAGAAGTCGTTGGGTGAGGGTTG
CAACGACCTTCTAGAGATTGTGAACCTTCACCGCAAGCGTCACGCGGCGG
CAGCGGCGGGGGAGGAAGAAAATGATGTAGAAGTAGACATGGAACTTACC
AAGAAGGTAAAGAGAGCTAAGGCGGCGGCCGCAGCCGCGGCCGAGGTGGT
GGCTTCTTCTTCATCTTCATCTTCTTCTTCATCATCATCATCATCGTCAT
CATCATCATCATCCAGCAGCAGCAGTGAGGAGGAGGAAGAGCAAGAGGAA
AAAGAAAGTGATGGCGACGAAAGCAGTGACGAGGAGGAGAAGGAAAAGCC
CAAGGCTAACGGTAGCGGGAAGAATTTGTCGACAAAAAAGAAAAAGGCCG
TGGCGGCGGTAGCGGCTGCTGACTCTAGCAGCAGCAGCAGCAGCAGCGAT
GATGATGATGATGATGATGATGATGATGATGACGATGGTGATGAAGAAAG
CGGAGAAGAAAATGAAAAGGAGGTGGAGGAAAAGCGGCCGAGTAAGAAGA
GGAAGGCGCCGGCAGCTGAAGAATCTGCGGAAGAGGAGGAGGAGGAAGAG
AAAAAGGAGAAAAAGCTACCGCCCGCCAAGCGGAGAAAGGTGGAACCTGC
TCCCGTTCAAGATAGCAGCAGCAGCAGCAGCAGCAGCAGTGACAGCAGTG
ACAGCAGTGACAGCGATAGCAGCGATAGCAGCGATAGCAGCGACAGCGAC
GATTGTTCCTCCTCGGACGAAGAGACGGACGAAGAACAGGAAGCTAAAAG
AGCGGTCGTGAAAGCGTCGGCGGAGAAAGAGCGACGGAAATCCTCCGCGG
CCGCCGCAGCGGCGTGGGTTCCGAAGGTCCTGACGCCCTACAAAGGCCCC
GCCTCCAACGGCGTTGCCAACGGTGGCATGAAGACGCCGGTAAAGGGCGC
GGAGGAGGAGGCAGGGGCGGAGGCTAACGGAGGCGAGGGCGCGAGCAGCA
CCGGAAAGAAATCGACGGGGAAGTCAAGGACGCAGGGAGAAGCGTTCAAG
AGGGTCCAGGACGACAACTGGGTCGGGGGTCTGAAGAAAGGGTTCGACGA
CAACACCTACGAGGGCACGTTTGGACAGGGAGGGTACGGGTTCAAGGCTA
GCGAGAAGCTTTCGAAGGTGCGAGGGAAGGACTTCCGACACGAGAAAACC
AAGAAGAAGCGCGGCAGCTACCGGGGGGGAGAGATATCGATGAACAGCTA
CTCGGTCAAGTTCGACGACAGCGACGGATGA
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