mRNA_P-littoralis_Contig750.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE) HSP 1 Score: 353 bits (907), Expect = 1.880e-116 Identity = 201/298 (67.45%), Postives = 235/298 (78.86%), Query Frame = 3
Query: 342 GVDLMDRHQLNRFESESRRIVKKGISHFLSPQLQVLVKEKPRIVLSEKADFAEMLSEEPSGRRIQELSMDLLRQSFMIRKRVVTAGVAAD-EHQEGGRNAVPPNVSMAHQTTNKFSPAFAVKAKQVAKQASKRPRPSSDDDD-ELTGSVGSSSVPTEAADL----KSAVKPLISRLVAMKWPD-WGNPFMTVFKKNNAPPRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQTAGGSSGGQQV-DKKQRFR 1211
GVD+MDRHQL+R+++ESRR ++KGISHFLSPQLQVL+KEKPRI L+EKA FAE+LSEE SGRRI+ELSMDL+R+SFMIRKRV A VPP++ A QTTNK SPAFA KAKQVAKQA KR RPSSD+ + E+ + G SS + AA L KS VKPLISRLVAMKWP WGNPF TVFKK+NAPPRYFEF+KR MNLTFIR+NLNKNKYT+V E+E DLELIV+NAL FNR DPV++FAL+LQ AFR EL +I++ L+DLAQQ GG SG + V DKKQR R
Sbjct: 10 GVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRRIEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXXVPPDMPAALQTTNKLSPAFARKAKQVAKQAMKRQRPSSDNGEGEMASASGYSSSASAAAPLSQEAKSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALQLQEAFRRELSVIKRNLEDLAQQR-GGVSGSEGVQDKKQRVR 306
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A3F2RFR5_9STRA (Bromo domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.830e-16 Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
+A+ L+ + PL++ L + W W GNPF+ F K+N P YF++VK M+LT ++E + + +Y+ +D+ D++L+ +NA FNR +PVH+ A+E++ + S+LP ++ DL Q+
Sbjct: 147 DASVLQKLLAPLVTELRGLTWAGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKIDQFTTDIKLMAANAKTFNRVGEPVHQMAIEIEQLYESKLPGYKKMFDDLQQE 274
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: M4BEQ4_HYAAE (Bromo domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ4_HYAAE) HSP 1 Score: 88.2 bits (217), Expect = 8.290e-16 Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
+AA L+ + PL++ L A+ W W GNPF+ F K+N P YF++VK M+LT ++E + + +YT +++ D++L+ +NA FNR +PVH+ A+E++ + S+L ++ +L Q+
Sbjct: 138 DAAMLQKLLAPLVAELRALTWAGWVVSGKAGNPFLQKFTKDNCKRLGVPNYFDYVKTPMDLTRMKEKVERAEYTKIEQFTTDIKLMAANAKAFNRVGEPVHQMAIEIERLYESKLSAYKKMFDELHQE 265
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: K3X1N2_GLOUD (Bromo domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1N2_GLOUD) HSP 1 Score: 86.3 bits (212), Expect = 5.580e-15 Identity = 45/128 (35.16%), Postives = 74/128 (57.81%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
+A+ L+ + PL++ L + W W GNPF+ + N P YF+FVK M+LT ++E + K +Y +D+ D++L+V+NA FNR +PVH+ A+EL+ + S+L + L DL Q+
Sbjct: 165 DASMLQKLLAPLVTELRGLTWVGWIVNGKAGNPFIQKITRENCKRLGVPNYFDFVKEPMDLTRMKEKVEKAEYVRIDQFTSDIKLMVANAKTFNRVGEPVHQMAIELEQLYVSKLAGYKTTLDDLQQE 292
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A8K1CEI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL) HSP 1 Score: 81.6 bits (200), Expect = 2.060e-13 Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
+A L+ + PLI+ L ++ W W GNPF+ K+N P YF+FV+ M+LT I+E + K +Y+ +D+ D++L+V NA FNR +PVH+ A EL+ + S++ ++L Q+
Sbjct: 165 DAQMLQKVLAPLITELRSLTWSGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRIDQFTVDIKLMVHNAKTFNRVGEPVHQMAGELEQLYESKVVAYGATFEELQQE 292
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A5D6YD80_9STRA (Bromo domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.680e-13 Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = 3
Query: 816 LKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
L++ + PL++ L + W W NPF+ + N P YF++VK M+LT ++E + K +Y V++ D++L+V+NA FNR +PV + A+EL+ + S+L R L+DL Q+
Sbjct: 167 LQTLLAPLVTELRGLTWAGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARVEQFTSDIKLMVANAKTFNREGEPVFQMAIELEQLYESKLVGYRATLEDLQQE 290
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A024G2N3_9STRA (Bromo domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G2N3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.600e-12 Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQ 1154
+A L+ + LI L + W W NPF+ ++N P YFE+VK M+LT ++E + K +Y +D+ D++ +V NA FNR+ +PVH+ ALEL+ + S+L R ++L Q
Sbjct: 161 DATMLQKILASLILELRDVTWTKWIVHGKPSNPFIQKITRDNCKRLGVPTYFEYVKEPMDLTRMKEKVEKAEYHKIDQFSHDVQQLVKNATTFNRTGEPVHQMALELEQLYFSKLKTYRSTFEELQQ 287
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A2D4BWE1_PYTIN (Bromo domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE1_PYTIN) HSP 1 Score: 79.0 bits (193), Expect = 1.640e-12 Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3
Query: 804 EAADLKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQQ 1157
+A L+ + PLI+ L + W W GNPF+ K N P YF+FV M+LT ++E + K +Y S+ + D++L+V NA FNR +PVH+ A+EL+ + +++ +L Q+
Sbjct: 164 DAQMLQKVLVPLIAELRGLTWSAWIVSGKPGNPFLQKITKENCRRLGVPNYFDFVAEPMDLTRVKEKVEKAEYYSIQQFTSDIKLMVQNAKTFNRVGEPVHQMAIELEQLYEAKVVSYAATFDELQQE 291
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: F0WKY4_9STRA (Uncharacterized protein AlNc14C138G7174 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKY4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.790e-12 Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 3
Query: 816 LKSAVKPLISRLVAMKWPDW------GNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQALQDLAQ 1154
L+ + PL+ L + W W NPF+ ++N P YFE+V M+LT ++E + K +Y +D+ D++ +V NA FNR+ +PVH+ ALEL+ + S+L R ++L Q
Sbjct: 175 LQKILAPLVMELRDVTWVKWIVHGKPSNPFIQKITRDNCKRLGVPTYFEYVTEAMDLTRMKEKVEKAEYHKIDQFSHDVQQVVKNATTFNRAGEPVHQMALELEQLYFSKLKTYRSTFEELQQ 297
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Match: A0A7S3YJB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJB1_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 7.510e-12 Identity = 32/111 (28.83%), Postives = 65/111 (58.56%), Query Frame = 3
Query: 819 KSAVKPLISRLVAMKWPDWGNPFMTVFKKNNAP----PRYFEFVKRQMNLTFIRENLNKNKYTSVDEIEEDLELIVSNALIFNRSFDPVHRFALELQAAFRSELPLIRQAL 1139
+ +KP+ L+A +W WGNPF V + N P YF+ ++ MNL +I+ ++K+KY + + + D++L++ NA+ +NR +PV A ++ ++ ++ ++ A+
Sbjct: 42 QGVLKPITEILLAKEWKKWGNPFTAVITRENCHKMDVPDYFDVIQTPMNLKWIKAKVDKHKYLTFQQFDADIDLMLENAMTYNREGEPVFAMAKVIRDVYKQKVADLQPAI 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig750.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig750.22.1 >prot_P-littoralis_Contig750.22.1 ID=prot_P-littoralis_Contig750.22.1|Name=mRNA_P-littoralis_Contig750.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp MATAEEQRSRNNGHNAGAAYLLTPAAELAALRDPTAGVDLMDRHQLNRFEback to top mRNA from alignment at P-littoralis_Contig750:60087..63241- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig750.22.1 ID=mRNA_P-littoralis_Contig750.22.1|Name=mRNA_P-littoralis_Contig750.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3155bp|location=Sequence derived from alignment at P-littoralis_Contig750:60087..63241- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig750:60087..63241- >mRNA_P-littoralis_Contig750.22.1 ID=mRNA_P-littoralis_Contig750.22.1|Name=mRNA_P-littoralis_Contig750.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig750:60087..63241- (Pylaiella littoralis U1_48)back to top |