mRNA_P-littoralis_Contig750.1.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: D7FUV0_ECTSI (RJL, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV0_ECTSI) HSP 1 Score: 380 bits (977), Expect = 1.280e-130 Identity = 183/200 (91.50%), Postives = 188/200 (94.00%), Query Frame = 3
Query: 132 MPEGVTRWSSGGTRRKSKGVDDLYTSRAREAPQKKRWCVRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKAL 731
MPEG RW SGG RRKSKGVDDLYTSRAREAPQKK WCVR+KIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTV GE+ RINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWL+EAADFGAGGIP+AVCANKIDKRRVVSEEEGQRWA+DHGF YFETSA SG NVGA FS LFEKAL
Sbjct: 1 MPEGTARWPSGGMRRKSKGVDDLYTSRAREAPQKKLWCVRMKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGESVRINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLVEAADFGAGGIPMAVCANKIDKRRVVSEEEGQRWAKDHGFTYFETSACSGVNVGASFSNLFEKAL 200
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A836CR06_9STRA (RJL, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR06_9STRA) HSP 1 Score: 314 bits (804), Expect = 2.890e-104 Identity = 145/191 (75.92%), Postives = 168/191 (87.96%), Query Frame = 3
Query: 159 SGGTRRKSKGVDDLYTSRAREAPQKKRWCVRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKAL 731
+ G RR+S+G+DDLYT+RA EAPQKK WCVRIKIISMG+L GKSCLIKRFCEERFV+KYISTIGIDYGVKPVTV+G+ R+NFWDLSGHPDFFEIRNEFYKDSQGA+LV+DV+ R SFEEL+ WL EAA FGA G+P+ VCANK+DK+R V+EEEGQRWA++ G+ YFETSA SGANV AVF +LFE A
Sbjct: 13 AAGGRRRSRGIDDLYTTRAAEAPQKKHWCVRIKIISMGSLATGKSCLIKRFCEERFVTKYISTIGIDYGVKPVTVRGQQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVFDVSRRESFEELQDWLSEAAKFGAQGMPVVVCANKVDKKRAVTEEEGQRWARERGYPYFETSANSGANVAAVFGRLFEAAF 203
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A485LT00_9STRA (Aste57867_25121 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT00_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.240e-70 Identity = 104/159 (65.41%), Postives = 126/159 (79.25%), Query Frame = 3
Query: 246 VRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFE 722
+RIK+ISMG GVGKSCLIKR+CEE+FVSKYISTIGIDYGVKPV + G R+NFWDLSG P+F E+RNEFYKD+QGA+L++DV++R +F+ LE WL EAA +G G P VCANK+DK RVVSE+EG WA G+ YFETSA +GANV LF+
Sbjct: 28 LRIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVKINGTEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILIFDVSSRRTFDALESWLKEAAKYGGGKFPCVVCANKMDKTRVVSEDEGAAWASAKGYEYFETSAQTGANVAEALHCLFQ 186
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A7S2C7J5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7J5_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.280e-70 Identity = 99/164 (60.37%), Postives = 130/164 (79.27%), Query Frame = 3
Query: 249 RIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKALPTT 740
R+KI+SMG G GKSCLIKRFCE+RFVSKYISTIG+DYGVKP TV G ++NFWDLSG P+FF++RNEFYKD+QG VLV+DV +++SF+ L+ W+ EA +G P+ VCANK+D +R ++E EG+ WA+ +G+ Y+ETSA SGANV VF +F++AL T
Sbjct: 9 RVKIMSMGPAGAGKSCLIKRFCEQRFVSKYISTIGVDYGVKPHTVDGNTLKMNFWDLSGQPEFFDVRNEFYKDAQGCVLVFDVTDQSSFDALDGWVQEAKKYGLKSAPVVVCANKVDLKRAITEREGREWAESYGYAYYETSAQSGANVNEVFEYMFDEALKRT 172
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A812YQF8_SYMMI (Dnajc27 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQF8_SYMMI) HSP 1 Score: 227 bits (578), Expect = 2.170e-70 Identity = 103/163 (63.19%), Postives = 131/163 (80.37%), Query Frame = 3
Query: 249 RIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAG--GIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKAL 731
RIKI++MG GKSCL+KR+CEERF+SKYI+TIG+DYGVKPV + G + R+NFWDLSGH +FFEIRNEFYKD+QG +LVYDV+ R +F+EL+ WL EA FGA GIP+ +CANK+DKRRVVSE+EG+++A F YFE SA SGANV +F +LF+ +
Sbjct: 21 RIKILTMGGGNTGKSCLVKRYCEERFISKYIATIGVDYGVKPVQIDGVSVRVNFWDLSGHQEFFEIRNEFYKDAQGIILVYDVSTRETFQELDTWLNEAKKFGANIPGIPVVLCANKVDKRRVVSEDEGRQYATSKNFSYFEASASSGANVTEMFEQLFQSVI 183
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A067C8I9_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8I9_SAPPC) HSP 1 Score: 227 bits (578), Expect = 2.320e-70 Identity = 105/174 (60.34%), Postives = 131/174 (75.29%), Query Frame = 3
Query: 219 EAPQKKRWCVRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKALPTT 740
+AP +RIK+ISMG GVGKSC+IKR+CEE+FV+KYISTIGIDYGVKPV + G R+NFWDLSG P+F E+RNEFYKD+QG +L++DV++R SFE L+ WL EAA FG G P VC NKIDK RVVSE+EG WA+ G+ Y+ETSA +GAN+ F LF + + T
Sbjct: 17 DAPTSAPPVLRIKVISMGDGGVGKSCVIKRYCEEKFVAKYISTIGIDYGVKPVRIGGAEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILLFDVSSRRSFEGLDAWLKEAAKFGGGKFPCVVCGNKIDKIRVVSEDEGMAWARARGYEYYETSAQTGANIADAFHSLFMQVVTKT 190
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A1V9YP76_9STRA (Ras family GTPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP76_9STRA) HSP 1 Score: 226 bits (577), Expect = 3.500e-70 Identity = 105/158 (66.46%), Postives = 126/158 (79.75%), Query Frame = 3
Query: 246 VRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLF 719
+RIK+ISMG GVGKSCLIKR+CEE+FVSKYISTIGIDYGVKPV + G R+NFWDLSG P++ E+RNEFYKD+QGA+L++DV++R SFE L+ WL EAA FG G P VC NKIDK RVVSE+EG+ WA+ G+ YFETSA +GANV LF
Sbjct: 28 LRIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVRIAGTDVRVNFWDLSGQPEYLEVRNEFYKDTQGALLLFDVSSRRSFESLDGWLREAAKFGGGKFPCVVCGNKIDKVRVVSEDEGKTWAKARGYEYFETSAQTGANVADALQTLF 185
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A024TXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXM7_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.270e-69 Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 3
Query: 246 VRIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFE 722
+RIK+ISMG GVGKSC+IKR+CEE+FVSKYISTIGIDYGVKPV V G R+NFWDLSG P+F E+RNEFYKD+QGA+L++DV++R SFE L+ WL EAA +G G P VCANK+DK R+V E+EG WA G+ YFETSA +GANV LF+
Sbjct: 25 LRIKVISMGDGGVGKSCVIKRYCEEKFVSKYISTIGIDYGVKPVKVNGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILMFDVSSRRSFEALDGWLKEAAKYGGGKFPCVVCANKVDKLRLVKEDEGAAWAAAKGYEYFETSAQTGANVAEALHHLFQ 183
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A8K1CFS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFS0_PYTOL) HSP 1 Score: 224 bits (570), Expect = 1.930e-69 Identity = 102/161 (63.35%), Postives = 127/161 (78.88%), Query Frame = 3
Query: 249 RIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKAL 731
RIKIISMG GVGKSC+IKRFCEE+FVSKYISTIGIDYGVKPVTV G+ R+NFWDLSG P+F E+RNEFYKD+QG +L++DV +R SFE ++ WL EAA FGAG P +C NK+D+ RVVSE+E + +A+ GF Y+ETSA +G N+ F LF + +
Sbjct: 7 RIKIISMGESGVGKSCVIKRFCEEKFVSKYISTIGIDYGVKPVTVLGQEVRVNFWDLSGLPEFLEVRNEFYKDTQGGILMFDVTSRKSFEAVDAWLREAAKFGAGRFPCVLCGNKVDRHRVVSEDEARAYARTKGFEYYETSACTGINIADAFMSLFTQVV 167
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Match: A0A2D4CEE6_PYTIN (Ras family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEE6_PYTIN) HSP 1 Score: 223 bits (567), Expect = 1.510e-68 Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 3
Query: 249 RIKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVKGEAARINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLIEAADFGAGGIPLAVCANKIDKRRVVSEEEGQRWAQDHGFLYFETSAYSGANVGAVFSKLFEKAL 731
RIKIISMG GVGKSC+IKRFCEE+FVSKYISTIGIDYGVKPV V G+ RINFWDLSG P+F E+RNEFYKD+QG +L++DV+NR SFE L+ WL EAA FGA P +C NK+D+ R VSE+E + +A+ GF Y+ETSA +G N+ F+ LF + +
Sbjct: 38 RIKIISMGDSGVGKSCVIKRFCEEKFVSKYISTIGIDYGVKPVLVLGQEVRINFWDLSGLPEFLEVRNEFYKDTQGGILMFDVSNRKSFEALDAWLREAAKFGAAKFPCVLCGNKVDRHRAVSEDEARAYARSRGFEYYETSACTGVNIHEAFTSLFTQVV 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig750.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig750.1.2 >prot_P-littoralis_Contig750.1.2 ID=prot_P-littoralis_Contig750.1.2|Name=mRNA_P-littoralis_Contig750.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=249bp MWRLHFRPMYTRIRTKYTCTLKCFNSLLSRSNNNHWTIYERHMPEGVTRWback to top mRNA from alignment at P-littoralis_Contig750:7326..10734- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig750.1.2 ID=mRNA_P-littoralis_Contig750.1.2|Name=mRNA_P-littoralis_Contig750.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3409bp|location=Sequence derived from alignment at P-littoralis_Contig750:7326..10734- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig750:7326..10734- >mRNA_P-littoralis_Contig750.1.2 ID=mRNA_P-littoralis_Contig750.1.2|Name=mRNA_P-littoralis_Contig750.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=747bp|location=Sequence derived from alignment at P-littoralis_Contig750:7326..10734- (Pylaiella littoralis U1_48)back to top |