mRNA_P-littoralis_Contig75.159.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig75.159.1
Unique NamemRNA_P-littoralis_Contig75.159.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A6H5JS43_9PHAE (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS43_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 5.420e-74
Identity = 115/182 (63.19%), Postives = 144/182 (79.12%), Query Frame = 1 
Query:  787 MFIMDFFGADEPHANLRVPLVQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQLISRLANLVELHSTVAPEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEE 1332
            MFI+D+FG+DEPHANL VPL +HLTAFPI A   RTFLGY+V+  ++  P  +  T+R+QGVIWGK  +       R+LI  LA++VELHSTVAPEDA I HDNIVYHG+L Q+EW +LL+ESKF+IGLG PL GPSAVDA+ AGC Y+NP+F  P K I++SQHP++AQ VGEPYVCS+E+
Sbjct:    1 MFILDYFGSDEPHANLGVPLKRHLTAFPITAEHQRTFLGYQVDPKRNKIPLSKPATKRRQGVIWGKTKDKL--FGNRRLILALADMVELHSTVAPEDAFIMHDNIVYHGYLPQDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFFRPEKKIYNSQHPFLAQRVGEPYVCSFEQ 180
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S3UWN5_HETAK (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWN5_HETAK)

HSP 1 Score: 238 bits (606), Expect = 4.420e-71
Identity = 131/317 (41.32%), Postives = 196/317 (61.83%), Query Frame = 1 
Query:  508 GQGMRVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQLIGRQDRMFIMDFFGADEPHANLRVPL-VQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQLISR-LANLVELHSTVAPEDARI-THDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIF 1449
            G+  R L+FTMDS++  V  S+ GG AGEI+++ +L + L E G  V+ A S+ +F+R     D YS +IVD WT+A KGW  K  L+GR+  ++++ FFG  +   NL++ L  Q LTAFP   +    F+GY    +     +     ++ QGV+WGK A+  +   G++ + R +A+L ELH+T+  +D        +V H HL    W+ LL ESKF++GL  PL GPSAVDA++ GC++INPV+S P  + ++SQHPY+A +VGEPYVC+   ++I +   C  KAL   L P +P++LTKE +  R+R IF
Sbjct:    7 GRPPRALIFTMDSITSYVEGSRKGGPAGEILIRTALEHGLRELGFAVDTATSDAEFDRLGKQRDDYSVLIVDPWTYAKKGWVPKTPLVGREKDVYVLSFFGT-QGLKNLKIDLRTQVLTAFP--TAPHNDFIGYFYTDNSLAARAAAVGKKKPQGVLWGKNAKYLK---GKEAVIRAVADLCELHTTIPEKDLPAGLRGALVVHQHLDPNGWHSLLAESKFLLGLEDPLLGPSAVDAVSNGCMFINPVYSKPKLDFYTSQHPYIADTVGEPYVCNTRLQEISSVEKCVQKALGSSLKPFIPKDLTKEQYLIRLRNIF 317
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S3YPU8_9EUKA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPU8_9EUKA)

HSP 1 Score: 213 bits (541), Expect = 6.640e-62
Identity = 118/293 (40.27%), Postives = 180/293 (61.43%), Query Frame = 1 
Query:  583 AAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQLIGRQDRMFIMDFFGAD-EPHANLRVPLVQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQL-ISRLANLVELHSTVAPEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYE-EKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIFE 1452
            A+GE+ ++ +L + L   GV+  +  S+ +FER    +D YS + +D WTWA +GW++KP L G + +++I+DFFG D  P  N  VPL +HLTA+P+      TFLGY +  + S P   R+      GVIWGK  + +    G+ + ++++A++V L ST AP+DA   H NI   GHLS E W  LLR  KF++GLG PL GPSA+DA+AAG +++NP +  P  + + SQHP+   S  +  VC+++ E   +  + C  KA+  DL P VP ELT  ++  R+++IF+
Sbjct:    1 ASGEMTIRLALCDGLAAVGVECHVVRSDSEFEREGKSLDKYSLIFLDPWTWAARGWKMKPFLHGHEQKLYILDFFGGDGHPGLNPTVPLSRHLTAYPV--HPRNTFLGYFLPDAVSHPQGNRKKA----GVIWGKDPKYYH---GKHVFLTKVASIVPLVST-APQDALPAHPNITSVGHLSPEGWEALLRSHKFLLGLGDPLVGPSAIDAIAAGAMFLNPHYRQPKLDHYRSQHPFAESSTPDS-VCAFDLEGSGEDLVECVEKAVGQDLAPSVPTELTAASYMERLKSIFK 282
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S0W0V7_9CRYP (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0V7_9CRYP)

HSP 1 Score: 206 bits (524), Expect = 6.350e-55
Identity = 118/314 (37.58%), Postives = 178/314 (56.69%), Query Frame = 1 
Query:  520 RVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQLIGRQDRMFIMDFFGADEPHA----NLRVPLVQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQLISRLANLVELHSTVAPEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIF 1449
            +VL+FTMDS+S  V+ S  GG +GEI+V+++L   L   GV   +A +E  F         Y  +I+D WTWA +G + KP L     ++F++DFFG     A    N R+     LTA+P   +   +FLG+ V+ +        R  + +QGVIWGK A  F+      ++  LA L  +H T+  E     H+NI +HG L+ ++W+RLL ESK+  GLG PL+GPSA+DA+AAGC+Y +P F  P    ++SQ+P+++  VG P+VC  +         CAL AL   + PL+  + T++ H+ R+  IF
Sbjct:  179 KVLIFTMDSLSTRVSASNRGGPSGEIVVRKALAQGLLGFGVSSVVADTESKFTEHMKHAGEYCMIILDLWTWAARGGKAKPFLKPHMKKVFLLDFFGNASTSATVFGNSRI-----LTAYP---TARFSFLGWFVKEAP-------RRKKLRQGVIWGKQASYFKDRW--PVVLALARLSSIHLTIKREKGMPEHENITWHGTLNSDQWFRLLAESKYFAGLGNPLAGPSAIDAIAAGCVYFDPTFKEPPLPTYTSQNPFLSSRVGAPHVCVVQMGSRSEYERCALAALTGSVQPLIVADYTEKEHSERISKIF 475
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7R9YA05_9STRA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA05_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.630e-50
Identity = 118/324 (36.42%), Postives = 181/324 (55.86%), Query Frame = 1 
Query:  520 RVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQLIGRQDRMFIMDFFG-ADEPHANLRVPLVQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQLISRLANLVELHSTVAPEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWP-------TKN----IFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALKALEYD-LPPLVPQELTKEAHATRVRTIFE 1452
            +VL+FT DSM     +      AGEI ++ SL  AL + G  V+ A +E +F         YSA I+D WTWAG   + +  L GR+D ++I+D+FG A  P   ++V +   LTAFP+PA    TF+GY VE      P  R   ++ QGV  GK  E +      + +  +A+ V++ +T++P +  ++H NI + GH + EE+ +LL  S+F+I  G  L+ PSA+DA+A GC+YIN V++ P       T+      + S+HPY+ + VG PYVC+  E ++D  + C  +A+    L P VP   T  A+  R+ T+FE
Sbjct:   22 KVLLFTTDSMKGYSTRGNV--PAGEIRMRWSLAIALGDLGAVVDTATTEEEFRWLAEQHAAYSAYILDPWTWAGSSRQPREFLQGREDSVYILDYFGRASFPSDGVQVDMKHVLTAFPLPAKN--TFIGYGVEQ-----PLAR--DKKTQGVFLGKLHE-YSPRYRMETLKAIADKVKIVTTISPGETLLSHPNIEFLGHKTPEEFDQLLATSRFLITFGDTLNEPSAMDAVANGCVYINTVYNKPRSINADLTRGDYGVAYRSEHPYLGERVGPPYVCTAREGELDDYMHCVDEAMRVGPLDPFVPHPFTDSAYRQRISTVFE 333
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S2RPM8_9STRA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPM8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.800e-50
Identity = 89/170 (52.35%), Postives = 121/170 (71.18%), Query Frame = 1 
Query:  946 RVTRRQQGVIWGKAAESFEKSAGRQ-LISRLANLVELHSTVAPEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIFE 1452
            R  +++QGVIWGK  + F    G++ L+  LA+ VELH+TV+ +  +  H +IVYHGHL+ E W  LL ES+FMIGLG PL GPSAVDA+ AGC+YINP +S P K ++ SQHPY+A+ VGEPYVC+    D+ A   C  +AL  DLPP++P+ELT+  +++RV  IFE
Sbjct:   11 RTGKKRQGVIWGKDPKHF---MGKEALLKALADEVELHATVSGKPVK--HPSIVYHGHLTPEGWQSLLAESRFMIGLGNPLVGPSAVDAVVAGCMYINPKYSAPVKEVYHSQHPYLAEQVGEPYVCTANLNDVAAVKACVHQALSADLPPMIPRELTEAEYSSRVEAIFE 175
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S4KE09_GUITH (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KE09_GUITH)

HSP 1 Score: 174 bits (441), Expect = 6.990e-45
Identity = 125/356 (35.11%), Postives = 187/356 (52.53%), Query Frame = 1 
Query:  520 RVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMM-----DIYSAVIVDSWTW-----AGKGWRLKPQLIGRQDRMFIMDFFGADE---PHANLRVPLVQHLTAFPIPASQSRTFLGY---RVEASQSMPPSGRRVT--------------RRQQGVIWGKAAESFEKSAGRQLISRLANLVELHSTVAPEDARITHDNIVYH--GHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKN---------IFSSQHPYVAQSVGEPYVCSYE-----EKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIF 1449
            RVL+FTMDS+   +   K+GG AGEI V+ SL   LT  G ++++A  ++ F   +        + Y   I+D WTW     +G  +R +P L GR+  +FI+DFFG  +      +L  P  Q L+AFP   +   +FLG+       S++M  S +RV               ++ +GV+WGK  E  EK  G  +IS +    EL S + P+   +       H  G+ ++EE+  +L  SKF++GLG PLSGPSA+DA+  G +Y+NP  S+P KN          ++SQHPY+A+  G  YVCS+      E D      C  +AL   L P +P+  T+E + +RVR+IF
Sbjct:  172 RVLIFTMDSLKTTLEAVKSGGPAGEIFVRTSLETVLTSLGFKIDVADHDMSFAAYSNQALGAKCNYYRFFIMDPWTWIERAPSGMLYRARPILAGRERDVFILDFFGNKQLSLAGVSLNFPTEQRLSAFP--TNFGGSFLGFFYSNQTLSKAMEASKKRVVVMNETAGNASSTDGQQLRGVVWGKKPEYLEKGQG--IISAVLEKCELVSFL-PQMGNLQAKFPRLHNLGYKTKEEFREILASSKFLLGLGDPLSGPSALDAMMVGAMYLNP--SFPNKNSDYPEELKSFYTSQHPYMAEH-GGAYVCSFNMISRSEPDQAQLYQCVERALRSKLEPQIPRHFTREEYESRVRSIF 519
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S2U380_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U380_9EUKA)

HSP 1 Score: 133 bits (335), Expect = 4.330e-33
Identity = 75/187 (40.11%), Postives = 119/187 (63.64%), Query Frame = 1 
Query:  526 LVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQLIGRQDRMFIMDFFGAD-EPHANLRVPLVQHLTAFPIPASQSRTFLGYRVEASQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQ-LISRLANLVELHSTVAPEDA 1080
            LVFTMDS+   + +SK GGA+GE+ ++ +L + L   GV+  +A S+ +FER    +D Y  + +D WTWA +GW++KP L+G + +++I+DFFG D  P  N  VPL +HLTA+P+      TFLGY +    + P  G+R   ++ GVIWGK  + ++   G+Q  ++++A++  L ST AP+ A
Sbjct:   11 LVFTMDSIQSRIDESKRGGASGEMTIRLALCDGLAAVGVKCYVARSDSEFEREGKSLDKYVLIFLDPWTWAARGWKMKPFLLGHEQKLYILDFFGGDGHPALNPTVPLQRHLTAYPV--HPRNTFLGYFLP--DAAPVRGKR---KKAGVIWGKDPKYYQ---GKQSFLTKVASVAPLVST-APQSA 186
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: A0A7S3UVM7_HETAK (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM7_HETAK)

HSP 1 Score: 128 bits (321), Expect = 1.480e-31
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = 1 
Query: 1099 IVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAAGCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALKALEYDLPPLVPQELTKEAHATRVRTIF 1449
            +V H HL    W+ LL ESKF++GL  PL GPSAVDA++ GC++INPV+S P  + ++SQHPY+A +VGEPYVC+   ++I +   C  KAL   L P +P++LTKE +  R+R IF
Sbjct:   28 LVVHQHLDPNGWHSLLAESKFLLGLEDPLLGPSAVDAVSNGCMFINPVYSKPKLDFYTSQHPYIADTVGEPYVCNTRLQEISSVEKCVQKALGSSLKPFIPKDLTKEQYLIRLRNIF 144
[Close]
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Match: D8LF21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF21_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 9.830e-25
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 1 
Query:  517 MRVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLTNALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKG 747
            MRVL++TMDS+   VAKS  GG AGEII++ESLT  LTEAGV+VE+A S+ DFERR   M +Y+AV+VD WTWAGKG
Sbjct:    1 MRVLIYTMDSIQTTVAKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGVYNAVVVDPWTWAGKG 77
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JS43_9PHAE5.420e-7463.19Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S3UWN5_HETAK4.420e-7141.32Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S3YPU8_9EUKA6.640e-6240.27Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S0W0V7_9CRYP6.350e-5537.58Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7R9YA05_9STRA1.630e-5036.42Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S2RPM8_9STRA5.800e-5052.35Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S4KE09_GUITH6.990e-4535.11Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
A0A7S2U380_9EUKA4.330e-3340.11Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3UVM7_HETAK1.480e-3150.43Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
D8LF21_ECTSI9.830e-2566.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:577121..583180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_82563
Preferred nameMGAT5
PFAMsDUF4525,Glyco_transf_18
Model size1458
Max annot lvl2759|Eukaryota
KEGG koko:K00744,ko:K09661
KEGG ReactionR05991,R07621,R07622,R07623,R07624,R07625
KEGG Pathwayko00510,ko00515,ko01100,map00510,map00515,map01100
KEGG ModuleM00075
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005795,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0030144,GO:0031090,GO:0031984,GO:0034645,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0070085,GO:0071704,GO:0098588,GO:0098791,GO:0140096,GO:0140103,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons7
Evalue7.8e-33
EggNOG OGs28M5P@1|root,2QTNG@2759|Eukaryota
EC2.4.1.155
Descriptionalpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
Cds size1440
COG categoryS
CAZyGT18
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.159.1prot_P-littoralis_Contig75.159.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig75 577121..583162 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791553.0007327-CDS-P-littoralis_Contig75:577120..5772431680791553.0007327-CDS-P-littoralis_Contig75:577120..577243Pylaiella littoralis U1_48CDSP-littoralis_Contig75 577121..577243 -
1680791553.0133204-CDS-P-littoralis_Contig75:577861..5780221680791553.0133204-CDS-P-littoralis_Contig75:577861..578022Pylaiella littoralis U1_48CDSP-littoralis_Contig75 577862..578022 -
1680791553.0246303-CDS-P-littoralis_Contig75:578944..5790301680791553.0246303-CDS-P-littoralis_Contig75:578944..579030Pylaiella littoralis U1_48CDSP-littoralis_Contig75 578945..579030 -
1680791553.0345407-CDS-P-littoralis_Contig75:579320..5794881680791553.0345407-CDS-P-littoralis_Contig75:579320..579488Pylaiella littoralis U1_48CDSP-littoralis_Contig75 579321..579488 -
1680791553.0474875-CDS-P-littoralis_Contig75:580108..5802831680791553.0474875-CDS-P-littoralis_Contig75:580108..580283Pylaiella littoralis U1_48CDSP-littoralis_Contig75 580109..580283 -
1680791553.0595047-CDS-P-littoralis_Contig75:580507..5806071680791553.0595047-CDS-P-littoralis_Contig75:580507..580607Pylaiella littoralis U1_48CDSP-littoralis_Contig75 580508..580607 -
1680791553.0730844-CDS-P-littoralis_Contig75:582535..5831621680791553.0730844-CDS-P-littoralis_Contig75:582535..583162Pylaiella littoralis U1_48CDSP-littoralis_Contig75 582536..583162 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791553.089134-UTR-P-littoralis_Contig75:583162..5831801680791553.089134-UTR-P-littoralis_Contig75:583162..583180Pylaiella littoralis U1_48UTRP-littoralis_Contig75 583163..583180 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig75.159.1

>prot_P-littoralis_Contig75.159.1 ID=prot_P-littoralis_Contig75.159.1|Name=mRNA_P-littoralis_Contig75.159.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=480bp
MGKMGKLRTPPLHGAMNVISSLLLFLTLGRLFFVLRPHGSKQSQETDNNR
VPDWLPTPQQQPQKGHPPTQRLTRQQDSRRKSNSQSVAHSAGRRGDAMPA
ELQTQFSNNLREGSGVGGYRKSGDNTHQRQRSTTRPVNRRSRREGRSSSS
SSNSHDSADNYAWGQGMRVLVFTMDSMSDIVAKSKTGGAAGEIIVKESLT
NALTEAGVQVEIAVSEIDFERRTGMMDIYSAVIVDSWTWAGKGWRLKPQL
IGRQDRMFIMDFFGADEPHANLRVPLVQHLTAFPIPASQSRTFLGYRVEA
SQSMPPSGRRVTRRQQGVIWGKAAESFEKSAGRQLISRLANLVELHSTVA
PEDARITHDNIVYHGHLSQEEWYRLLRESKFMIGLGLPLSGPSAVDALAA
GCIYINPVFSWPTKNIFSSQHPYVAQSVGEPYVCSYEEKDIDAAIGCALK
ALEYDLPPLVPQELTKEAHATRVRTIFEPL
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mRNA from alignment at P-littoralis_Contig75:577121..583180-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig75.159.1 ID=mRNA_P-littoralis_Contig75.159.1|Name=mRNA_P-littoralis_Contig75.159.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6060bp|location=Sequence derived from alignment at P-littoralis_Contig75:577121..583180- (Pylaiella littoralis U1_48)
CCATGCTAGAGCACGCGGATGGGGAAAATGGGCAAACTTCGCACACCGCC
CTTACATGGCGCGATGAACGTCATATCATCCTTGCTTCTGTTCCTGACCT
TAGGAAGACTGTTCTTCGTTCTTCGCCCCCACGGAAGCAAGCAGTCACAA
GAAACTGATAATAATCGAGTGCCTGATTGGCTTCCTACGCCGCAGCAACA
GCCGCAAAAGGGTCACCCTCCCACGCAGAGGCTTACACGCCAGCAGGACA
GCCGACGCAAGTCTAACAGCCAGAGCGTGGCGCACAGTGCCGGTCGACGC
GGCGACGCGATGCCTGCAGAGCTTCAGACGCAGTTCTCGAACAACCTTCG
GGAAGGGAGCGGCGTCGGAGGATACCGCAAATCCGGGGATAACACACATC
AAAGACAACGGTCCACCACGCGACCCGTAAATCGGAGATCAAGAAGGGAG
GGCAGGAGCAGCAGTAGTAGCAGCAATAGCCATGATTCCGCCGACAACTA
CGCTTGGGGGCAAGGAATGAGGGTACTGGTCTTTACGATGGACTCGATGT
CTGACATAGTGGCAAAAAGCAAGACGGGGGGGGCTGCTGGGGAAATTATT
GTCAAGGAGAGCTTGACCAACGCATTGACGGAAGCCGGCGTTCAGGTGCG
ACATGGCTTTTGTGCTCTGGGTACGTACCGTACGACACCGTGGCATTTCA
CAGGGGTGTTTGGTGTTTTTGTAGGATTAAAAAAAAAGGTGTTTGCAGAC
CAGTGCTTTGTTCGATCGACGGTTGCAAACACTTCTCCTACAGTATTGTT
GTTGTTGTTGTTGTTGTTGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTCGTTGTTGTTGTCTTCACATTAAAAACCATTCCGATCTCTCCTCAGTA
CCTTCTAATGTCCGTACTCCACCGATCAGGTACGATTTCCGTGGTCACAG
GCTGCTTGCCCCAGAAGAGGTATGTAGTACTCGGGAGATCCCCTCAGTCC
ACCAAATAAAGGCACGACAAGGAGACTCCGGCAAAAACAAAAACGGACCC
CGAGAAATCACACAACGCTGTACAAAAATAGAACAAGATACAAGAAAACA
AGAAAAGGGAGCCTGGTCTGCTTGAGTTTATTGCTCCCTTTCGTATCGAG
TACTACGTAGCACCTGGCCAATGTTCAGAAGAAGCACATACACATATACT
GTATACTTGTACAGTATGCATTTACACGCTCACTTGCTCATCACAGGAGT
TTACCTGATATTTCTCAGTGATCGCCGTTTCTGCAAATTTACCTGTTACT
TTCGACCCATCCCACGATATAGGGGTCAATTTTCGGACACCCTGGATTGC
AACGTGCTTAATCAAGCGGCTACCTATACAGTTTCATAACTCTTCTATTT
TTCAATCGGGGGTACCCCCCCTATCGTGGGATGGGTCTTTCCGGCAATTA
CCGCAAAAAGCGGGATGGACAAGTATCACCCCCGGGGATCCGCAGAATAT
TTTCTCGAACGGTACCCGCGGGTTCTGCAGACCCCTGCACCATATACGTC
AGCGCTCGGAAGCTGCTGATAAAATGCTCAAATGGTACCGGAACACTTCT
TCTTGCGTTCCGACATGTCCAACAACACCAACCGGGGCAATCTGCATAAT
TTTAATATGAGAAGATAACATGGCACTGGTGCATAGAATCGAATATTTTT
AACTTTGGTACTTTTTACTTTTTACTTTCTACTCTTGCAATCTGTGATGC
CGTCAAGCTCGGTCAATGTTCCCAGGAGCATTCGTATGATAGCAGGTTCA
GGTCGTGTGCTCTAGTTGTGGTGAGGGTCTATCTTTGGTGGTGAGGTTCG
TGTGAAACGAGGGTCTGCTGTGGTGGTAAGAGGGGAGGGGGGGCATGGAG
GACGTAGGGGGGCCCGTGTAGCAGAGGGGGAGGGGGGCATCCATATCTAC
CGTGTTACCGCAGAATAACCGTGTTACTTTCCGCTAAAACAATTACCGGT
AATTACCGGTCATGCGGCAACGGCGATCCTTGATATTTCTAGGCGCACAA
AAACGGCATTCATTCTACACTGCTATATAGTGCATTCACATTCACATATG
ACATATTGCTGCTACACTAATTCGTGTGTAATTGGAGGTGCTGTAAAATA
TGTCAATCTCGCGACACGGGAGTCATTCGTGTCTGTATTTATCCTGCATA
CAGCGAGCTGTCAACACTGCTGGTGATTCAAATAGGATTGAGTTGTGTGT
TGCGATCACATTCAGGTCGTATGACGTGATGCATCGAAAGTCTCGAGAAA
AAGCAGCATTAAGTGTTACTGCACCACCTTCGCCTTGCTGTACAACGCTA
TTGACAACTAAGAATAGTGTTCCGACCCCCAGGAGTGGAGAGCGACTTTT
TGTAGTATCCAAAACCGAGGACTGGAAATCCATTATTTCGCGAGTGGACA
ATCTTCGACTCGAAGCCGACGAGGAAAAAGGGATGGCCGAGACTTTCTCG
CTATTCAAATAAAGGCAAGCACCGAAAAGAAGAAAGGGGGAGGACTGACA
TCAAACACTGCTGTATTCGATAGGTGGAGATTGCCGTGTCCGAGATCGAC
TTCGAAAGGCGGACAGGCATGATGGACATCTACAGCGCTGTTATTGTCGA
CTCCTGGACCTGGGCAGGAAAAGGTACAGCGAGATAGGTCGGCAGGATGT
ACAACATGAGGAAAAGTTTCTTGGTTACTTCAATACTGGGTTGTAGGTCT
TGTCGCAATAATGCTGCAGCTGTGTATCCTTGCTCTTCACGACAACAACC
TTTACGTCGTAGATGTGGTGAATCGCAAAACATGTCGCGCGTGACTATAA
ATAAATTTGACGTAATGGCTTTCTCGACACTCCATTACGCCGTGCAGGCT
GGAGGCTCAAGCCGCAGCTCATAGGCCGACAAGACAGGATGTTTATTATG
GATTTTTTCGGCGCGGATGAGCCGCACGCCAACCTAAGAGTTCCACTTGT
TCAACACCTTACGGCCTTTCCGATCCCGGCGTCCCAGAGCCGTACGTTTC
TGGGGTACAGGGTAGAAGCTAGGTGAGTTTAACCGAGGACCTTGGGGACC
ACGATCGGCGATATCGACTGTTGTTACCGATTGGTGTCTTCGACGTTGCT
GCGGGGTGGTATTTCCTCGACCGGGTCCAGAATGCAGCAACACTACATAG
AACGCTTTATTAAGAAGATGAAACTACACGGGTACAAACTGAAGCGAAGG
AAGGGGATGAAGTGCCATCCTCTTCAGAACAACTTAGGAAATGCAATAGT
AGGGTGCGTTTCCTTGTCACAAAAGTTTTTAACACACCACACGGCCAAAC
ATGATGTATAAGGCGATGTAGACGATGCTGCAGAACACCGAGCTACACAG
CCTATCGTTATAATCACTATCTCAATCAGCGTTCGTTTCGGTAGACCGAC
GCCCCGTCTTCGAGTAGTGCAACAGCAGAACATAGGACCCTCCGTTGTCA
ATCCCTGAGTAGAAATGTGTTTTTGGGCAGATGTGGCCATCGGTTCACGT
GTGTGTTGACATTGGTGAGAAATGCGACAAGAGCCCGACCTTGAGCGCTC
GATAACGCAGCGTAGGACGAAGCTTACCGCAGCCCTCTGACCACTACCTC
CATCGCTTCTCCTGTGCTTTGTACTTCTCGTGGGCCGAGTAGTCAGAGCA
TGCCCCCGTCGGGTAGAAGGGTGACAAGACGACAGCAAGGTGTGATCTGG
GGCAAGGCCGCGGAGTCGTTCGAGAAATCCGCTGGCCGCCAACTTATCTC
TAGACTTGCGAACCTGGTGGAGCTCCACTCAACCGTTGCGCCCGAGGACG
CCAGAATAACGTAAGTGATGTGTACTGTCATACAAGCTTTGTCGTACAAT
AAACAAATCGTACAGCAGTAGGTAGGGCTGCTGTCATGAAGGGAGAGCGG
ACCAAGATGCGGAACGTTTCCCTGTGGCATGTAGATGAAATGACCGTCTG
ACACAATAATCTACGGATGGCGAGTAAATGTCTCACAGCACTACATTGGG
GGGCCATCTGCTTTTATATCGACCATGCGAGACATGTCCATAGCGCTCTC
ACCCAACGTTCGGGGGTTCGGTGCTGCTTTCCCGTCCAACTTGTCGGCAG
GCATGATAATATCGTGTACCACGGTCATCTATCTCAGGAGGAGTGGTATC
GCTTGCTGAGAGAGTCAAAATTCATGATCGGCCTAGGTGAGTGCTTCCGC
AAACGCTTGTTCCAGATTTGCCCGTATCCCCAATATATAGCCGGTCGCCC
CAGTAGTTCAGTTGGTAAAAAAATGAACTATGATCAACGTGGGCAGTTTT
GTTTTTCTGCCAACGTTGGCAGATTTAATATCGTGCCAACGGTATGTCAT
TAACTTCGACGCCACCGTCCTCATCTCGTGACACGAGCATTCAGTGGTCA
AAGTAGTAGTTCAGACGGTTTGCTGCGGCCGTGGGCTGCCCTACTGGGAG
GTTAATATCGTCGACCAAAAAACAAGTAGGCGGCGTCACACCTTGTCTCC
CCCTTTTCATTTGGCCGACGACATAGCTCCTAGTAGGACAGCCCAAGGCC
GTAGCAAACCGCCCCACCCTTTACTTTAGCCACCAGATGCTCGTGTCACG
AGATAAGGGCGATGGTGTCGAAATTGGTGGCAAACAGTTGGCAGGATATC
AAATCTGCCAACGTTGGCAGTGAAAAACACCTTGCCCACGTTGGCAGATT
TATCATTTTTGAAGTAAACGTATTTCTCGCGCTTTTGTTCTATTCTCAAT
AAGAATAAGCTGAGATGTACTTCGAGTATGATAGGCGGTAGATGCGTTCC
CTTGGCTCTCCATAGTTACTGTATACTCATTGTCACAGACTTGTGTACTG
AAACCACTTGACAGTATTTGGTATGGCTAGGTGGTAGCCCCAGTCTGCTA
TTTTTGTGAGAGGATTGGGTATGTTGGTGTTGTGTTCCGGACAATGTTTG
ATTGAATCGGTGCATACTTTCGGTACTGGGTGCGATGAACGACGGCTGGG
TTCGACATGCCGGCCATGCCCGCAAATTAATATGACAGTCCCGCCGTAGG
ATATGCCACATCTTAGACCGTTGTCGTCATCGGGGTGTCGCTTTCGCGTG
ACGTTCAGGTTTACCGCTCTCAGGACCGTCCGCTGTTGACGCTTTGGCGG
CCGGGTGCATCTATATCAACCCTGTCTTTTCATGGCCCACGAAGAATATC
TTCAGCTCGCAGCACCCTTATGTGGCTCAAAGCGTCGGGGAGCCGTACGT
TTGCTCCTATGAAGAGAAGGTAACCTGCACAGCTACAGCAACAACGGCAA
TGTGATGCGAGTGTTTCATTAGACATTGTTGTGGTATTTGTGTTTCACCA
TGGCTTGTGTCTTGCCTTGAGGAGGTATCATAACTGCGGCCGATCCGGGG
CAAAACTCTCCTTGGCACCAGCAGGAGTCACACTACTACGAAGTAGTTCT
CAAGTGCGCTGCAATGTAGTCCTATTCTGGCGCATCGTTGCAAAATGCGC
ACTGCACTACTTACACGATACGTGCAGTGCCGCAGACCCGCAGAGCTATG
ACACAACGACCATTCCAACAGCACGAAAAGGGACTAGTATCAACTAGAGA
GCCAGATTTTTTTTGGTTGATACGATGCCAACGACACCACCCGTGGATTT
CCGCTGGCTCTGGCATTGGTGTATATGTCGGCGTGCTAAAAATGACCGCG
ACCTTTACGTCTCTTTTACCCATATGTGTATCTCATTATCACCGTGCCAA
CCAATAAACTACGCTGCAGTGCGAGGTATCGAACATGACTCCAAGCTTTT
CTGATTTATGACATTACACATTGAAAGTAAAACAAAGCAGGTTCCGTGAA
GAAATGACGATATTTCCATTTGTTTTCGCTGACGCAGGATATCGACGCCG
CGATAGGGTGCGCCCTAAAAGCATTGGAGTACGACCTACCACCACTCGTG
CCGCAAGAGCTCACAAAGGAAGCTCACGCAACACGGGTTAGAACGATTTT
CGAGCCTTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig75:577121..583180-

>mRNA_P-littoralis_Contig75.159.1 ID=mRNA_P-littoralis_Contig75.159.1|Name=mRNA_P-littoralis_Contig75.159.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1440bp|location=Sequence derived from alignment at P-littoralis_Contig75:577121..583180- (Pylaiella littoralis U1_48)
ATGGGGAAAATGGGCAAACTTCGCACACCGCCCTTACATGGCGCGATGAA
CGTCATATCATCCTTGCTTCTGTTCCTGACCTTAGGAAGACTGTTCTTCG
TTCTTCGCCCCCACGGAAGCAAGCAGTCACAAGAAACTGATAATAATCGA
GTGCCTGATTGGCTTCCTACGCCGCAGCAACAGCCGCAAAAGGGTCACCC
TCCCACGCAGAGGCTTACACGCCAGCAGGACAGCCGACGCAAGTCTAACA
GCCAGAGCGTGGCGCACAGTGCCGGTCGACGCGGCGACGCGATGCCTGCA
GAGCTTCAGACGCAGTTCTCGAACAACCTTCGGGAAGGGAGCGGCGTCGG
AGGATACCGCAAATCCGGGGATAACACACATCAAAGACAACGGTCCACCA
CGCGACCCGTAAATCGGAGATCAAGAAGGGAGGGCAGGAGCAGCAGTAGT
AGCAGCAATAGCCATGATTCCGCCGACAACTACGCTTGGGGGCAAGGAAT
GAGGGTACTGGTCTTTACGATGGACTCGATGTCTGACATAGTGGCAAAAA
GCAAGACGGGGGGGGCTGCTGGGGAAATTATTGTCAAGGAGAGCTTGACC
AACGCATTGACGGAAGCCGGCGTTCAGGTGGAGATTGCCGTGTCCGAGAT
CGACTTCGAAAGGCGGACAGGCATGATGGACATCTACAGCGCTGTTATTG
TCGACTCCTGGACCTGGGCAGGAAAAGGCTGGAGGCTCAAGCCGCAGCTC
ATAGGCCGACAAGACAGGATGTTTATTATGGATTTTTTCGGCGCGGATGA
GCCGCACGCCAACCTAAGAGTTCCACTTGTTCAACACCTTACGGCCTTTC
CGATCCCGGCGTCCCAGAGCCGTACGTTTCTGGGGTACAGGGTAGAAGCT
AGTCAGAGCATGCCCCCGTCGGGTAGAAGGGTGACAAGACGACAGCAAGG
TGTGATCTGGGGCAAGGCCGCGGAGTCGTTCGAGAAATCCGCTGGCCGCC
AACTTATCTCTAGACTTGCGAACCTGGTGGAGCTCCACTCAACCGTTGCG
CCCGAGGACGCCAGAATAACGCATGATAATATCGTGTACCACGGTCATCT
ATCTCAGGAGGAGTGGTATCGCTTGCTGAGAGAGTCAAAATTCATGATCG
GCCTAGGTTTACCGCTCTCAGGACCGTCCGCTGTTGACGCTTTGGCGGCC
GGGTGCATCTATATCAACCCTGTCTTTTCATGGCCCACGAAGAATATCTT
CAGCTCGCAGCACCCTTATGTGGCTCAAAGCGTCGGGGAGCCGTACGTTT
GCTCCTATGAAGAGAAGGATATCGACGCCGCGATAGGGTGCGCCCTAAAA
GCATTGGAGTACGACCTACCACCACTCGTGCCGCAAGAGCTCACAAAGGA
AGCTCACGCAACACGGGTTAGAACGATTTTCGAGCCTTTG
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