mRNA_P-littoralis_Contig75.156.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: D8LF23_ECTSI (Flagellar WD repeat-containing protein Pf 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF23_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 1.410e-184 Identity = 287/335 (85.67%), Postives = 300/335 (89.55%), Query Frame = 1
Query: 292 MQQEARTKEGGARRSGHNGXXXXXXXXXXXXXXXXXTAIITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
MQQEARTK+GGA+RSG G T ++TQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALR ELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGR+ TDLKRLKQHFKAY PTLKELERKYQLAMKEKMLMKLERDR KAK +AIEAQMKAMQEERGIS Q+ A GSR RPVRGPGQPGG++ LSPISAPPKNPQPTMGVKHK+DSKLPNE++V NPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWK+WSVPNCDLLMSG
Sbjct: 1 MQQEARTKDGGAKRSGQGGGGKDGSVDGARGSGPSETEVLTQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRHELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRMATDLKRLKQHFKAYEPTLKELERKYQLAMKEKMLMKLERDRTKAKIDAIEAQMKAMQEERGISQQETNARGAGGSRARPVRGPGQPGGQE-LSPISAPPKNPQPTMGVKHKHDSKLPNEDTVENPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKVWSVPNCDLLMSG 334
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A7S2BPZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BPZ4_9STRA) HSP 1 Score: 361 bits (926), Expect = 4.830e-113 Identity = 210/387 (54.26%), Postives = 260/387 (67.18%), Query Frame = 1
Query: 139 VDLDDERAVLEVVEFSDSEDEDFDYKAVEEDFS-DEEDGQHEDLSAALATLRMQQEARTKEGGARRSGHNGXXXXXXXXXXXXXXXXXTAIITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
++ +DE VLE VE SD E +D+ Y+ VEED DE+ D++ ALA L+ GG+ + ITQVRPSVVDDFIRNF+IKVG+ RTLDSFNTEWYELQAKG+L EEYTT VPDIYLRN+ELDEQVV LRQ+L KM+ I +AQGTWDKFRKERDFHRMHHKRVVQEK +L TDLKRL++H+ +Y PTL EL+RKY++AMKEKMLM+LERDR++A+ +E +K +QEE+ L P A P+ + G DSKLP ++SV NP+ +L F P V+RF LRK+F+GHLNSV+AVAFHPRK I+ATVSDD+TWK+WSVP+CDL+MSG
Sbjct: 1 MEAEDELEVLERVEISDDEGDDYKYEGVEEDLGFDEDXXXXXDITNALAALK---------GGSTQKSETAAMDSTAGYRS----------ITQVRPSVVDDFIRNFMIKVGMQRTLDSFNTEWYELQAKGKLSEEYTTPVPDIYLRNQELDEQVVNLRQQLDKMRDITAKAQGTWDKFRKERDFHRMHHKRVVQEKNKLTTDLKRLRKHYLSYEPTLTELQRKYEVAMKEKMLMRLERDRMRARVATLEQTVKQLQEEK-------------------------------LPPADAGPEKSRSKKG----RDSKLPPDDSVVNPYAELEFDAPPVDRFQLRKTFRGHLNSVAAVAFHPRKPILATVSDDQTWKLWSVPDCDLIMSG 333
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A7S2RK83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK83_9STRA) HSP 1 Score: 357 bits (915), Expect = 5.920e-113 Identity = 209/383 (54.57%), Postives = 257/383 (67.10%), Query Frame = 1
Query: 151 DERAVLEVVEFSDSEDEDFDYKAVEEDFSDEEDGQHEDLSAALATLRMQQEARTKEGGARRSGHNGXXXXXXXXXXXXXXXXXTAIITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKN-DSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
DE V+E VE SDSEDE+F Y+ V D E++ EDL++ALA+++ + K G R+ +TQVRP+VVDDFIRNFLIKVG+ RTLD FN EWYEL+AKGRLGEEYT+ VPDIY+RNEELDEQV LRQ+L KM+ I +A+GTWDKFRKERDFHRMHHKRVVQEK +LVTDLKRL++H +Y PT+KEL+RKY++AMKEKMLM+LERDR+KA+ +EA +K +QEE P P+P + K DSKLP +E V NPF DL F P VERF LRK+F+GHLNSVS +AFHPRK I+ATVSDD+TWK+WSVP+C+L+MSG
Sbjct: 24 DEVDVIEEVEVSDSEDEEFPYENVA-DMGFEDEDXXEDLASALASIQGKPREAVKTGVDPRA------------------------VTQVRPAVVDDFIRNFLIKVGMQRTLDVFNGEWYELKAKGRLGEEYTSAVPDIYMRNEELDEQVSQLRQQLEKMREITAKAKGTWDKFRKERDFHRMHHKRVVQEKNKLVTDLKRLRKHTVSYDPTIKELQRKYEVAMKEKMLMRLERDRMKARVATLEAAVKQLQEEE------------------------------------KPEVEPEPQKPRRKKGKDSKLPPDEGVVNPFADLEFDAPPVERFQLRKTFRGHLNSVSGLAFHPRKPILATVSDDQTWKLWSVPDCELIMSG 345
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A7S3ZNS2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNS2_9STRA) HSP 1 Score: 328 bits (841), Expect = 2.930e-99 Identity = 167/296 (56.42%), Postives = 213/296 (71.96%), Query Frame = 1
Query: 409 ITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
+TQVRP VVDDFIRNFLIKVG++RTLD+FN+EWY+LQ KG+L E YT VPDIY+RN++LDE+VVAL+Q+L KM+ I E+AQGTWDKFRKERDFHRMHH+RVVQEK +L TDL+RL++H+ +Y PTLK+L++KY++AMKEKML +LERDR+KA+ +EAQ++ +Q E+ K DSKLP +SV NP+ L F PP +ER+ LR++FKGH+N+VSA AFHP K I+ATVSDD TWK+WSVPNCDL+MSG
Sbjct: 84 LTQVRPEVVDDFIRNFLIKVGMSRTLDNFNSEWYDLQQKGKLAEVYTDTVPDIYVRNQDLDERVVALQQQLDKMRIITEKAQGTWDKFRKERDFHRMHHRRVVQEKAKLTTDLQRLRKHYLSYEPTLKDLQKKYEVAMKEKMLTRLERDRIKARVHTLEAQVQQLQAEKXXXXXXXXXXX---------------------------------XXXXKRGADSKLPPRDSVPNPYASLTFDPPGIERYQLRRTFKGHVNAVSAAAFHPHKPILATVSDDATWKLWSVPNCDLVMSG 346
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A6U4DU09_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DU09_9STRA) HSP 1 Score: 320 bits (819), Expect = 7.900e-96 Identity = 169/296 (57.09%), Postives = 210/296 (70.95%), Query Frame = 1
Query: 409 ITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
IT V+P+VVDDFIRNFLIK GL RTLD FNTEWYELQ+ G+L EEYT VPDIY RN ELDEQ V LR+EL +M+AI E+AQGTWD+FRKERDFHRMHH+RVVQEK RLVTDLKRLK+H+K+Y P LKEL KY+ AMKEKML+KLERDR+KA+ +E Q+ ++QE+ A +P R K + + LP ++S+ NP+L L F P VE F+++K+FKGHLN++S++AFHP+K I+ T SDD TWKIWSVPNC+L+MSG
Sbjct: 82 ITNVKPTVVDDFIRNFLIKTGLRRTLDEFNTEWYELQSTGKLSEEYTNVVPDIYERNMELDEQCVVLRKELERMKAITEKAQGTWDRFRKERDFHRMHHQRVVQEKNRLVTDLKRLKKHYKSYEPLLKELRHKYETAMKEKMLVKLERDRMKARVGVLETQLASLQEQXXXXXXXAQT-------EKPRR---------------------------KKRGPAVLPPDDSLVNPYLGLEFTAPLVESFSMQKTFKGHLNAISSLAFHPKKPILCTTSDDMTWKIWSVPNCELIMSG 343
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A836CMA9_9STRA (Flagellar WD repeat-containing protein Pf 20 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMA9_9STRA) HSP 1 Score: 313 bits (802), Expect = 4.350e-93 Identity = 206/379 (54.35%), Postives = 248/379 (65.44%), Query Frame = 1
Query: 211 YKAVEEDFSDEEDGQHEDLSAALATLRMQQEARTKEGGARRSGHNGXXXXXXXXXXXXXXXXXTAIITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSR-----------------VRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDLLMSG 1296
Y+ +D +D +L+AALA L+ +++A GAR S GXXXXXXXXXXXXXXXX +TQ RP+V DDFIRNFLIK G+ R LD+FNTEW+ELQAKGRLG E+TT+VPDIYLRNEEL EQV LR +L +MQ + ERA+GTWDKFRKERDFHR+HHKRVVQEK RLVTDLKRLK+H+KAY PTL EL+RKYQ AMKEKML+KLERDR V + G G GG A SP+ QP MG + +ND++LP +S L P ERFALR+S+KGHLN+V+A+AFHPRK I+AT SDDETWKIWS+P+C+L+MSG
Sbjct: 10 YQRCADDLPASDDDSDNELTAALAALQQRRDAL----GARDSA-KGXXXXXXXXXXXXXXXXAPYAVTQSRPAVPDDFIRNFLIKAGMARALDAFNTEWFELQAKGRLGPEHTTRVPDIYLRNEELGEQVAELRAQLARMQEVTERARGTWDKFRKERDFHRLHHKRVVQEKQRLVTDLKRLKKHYKAYEPTLAELQRKYQTAMKEKMLLKLERDRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVGELSGSGG-GGTAATSPLR------QPAMGGRRRNDARLPANDSAGAEALR-AHAPCEAERFALRRSYKGHLNAVAALAFHPRKQIIATASDDETWKIWSLPDCELIMSG 375
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A7S4E4I8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4I8_9STRA) HSP 1 Score: 283 bits (723), Expect = 6.890e-85 Identity = 147/273 (53.85%), Postives = 191/273 (69.96%), Query Frame = 1
Query: 409 ITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIV 1227
+TQVRP VVDDFIRNFLIKVG++RTLD+FN+EWY+LQ KG+L E YT VPDIY+RN++LDE+VVAL+Q+L KM+ I E+AQGTWDKFRKERDFHRMHH+RVVQEK +L TDL+RL++H+ +Y PTLK+L++KY++AMKEKML +LERDR+KA+ +EAQ++ +Q E+ K DSKLP +SV NP+ L F PP +ER+ LR++FKGH+N+VSA AFHP K I+
Sbjct: 84 LTQVRPEVVDDFIRNFLIKVGMSRTLDNFNSEWYDLQQKGKLAEVYTDTVPDIYVRNQDLDERVVALQQQLDKMRIITEKAQGTWDKFRKERDFHRMHHRRVVQEKAKLTTDLQRLRKHYLSYEPTLKDLQKKYEVAMKEKMLTRLERDRIKARVHTLEAQVQQLQAEKXXXXXXXXXXX---------------------------------XXXXKRGADSKLPPRDSVPNPYASLTFDPPGIERYQLRRTFKGHVNAVSAAAFHPHKPIL 323
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A2R5G3B1_9STRA (Flagellar WD repeat-containing protein Pf20 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3B1_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.070e-80 Identity = 151/291 (51.89%), Postives = 205/291 (70.45%), Query Frame = 1
Query: 412 TQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNCDL 1284
T VRP+VVDDF R+FLIKVGL RTLD+FNTE YELQAKG+L EE VPDIYLRNE+LD QV LR +L + + +A++AQ TWDKFRKERDFH+++HKRVVQEK R++ ++KRLK+H++ Y PT+++L KY+ AMKEKMLMK+ERD+ +A+N +E Q++ +++ AAG + +GP G A + S + P+ K K D+ P+ + +N PFLD + P V+ K+F+GHLN+VSA+A+HP K +VAT SDD+TWK+WSVPN DL
Sbjct: 113 TVVRPAVVDDFFRSFLIKVGLERTLDAFNTEMYELQAKGKLNEELVGAVPDIYLRNEKLDGQVKDLRDQLARTKQVADKAQSTWDKFRKERDFHKLNHKRVVQEKNRMIQEIKRLKKHYQTYEPTIQQLRHKYEAAMKEKMLMKIERDKYRARNSTLELQLQTIED-------GEAAGPSRSAIETSHKGPS--GSYMASTEASR--ASQVPSKSPKRKVDNGFPSVDPIN-PFLDTSYDKPAVKNMQAIKTFEGHLNAVSALAYHPTKQVVATASDDQTWKLWSVPNGDL 391
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: T0QL97_SAPDV (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QL97_SAPDV) HSP 1 Score: 279 bits (713), Expect = 2.030e-80 Identity = 153/292 (52.40%), Postives = 202/292 (69.18%), Query Frame = 1
Query: 403 AIITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNC 1278
A+ TQVRPSVVDDFIRNFLIK+ + RTLD+FNTEWYEL AKG+L EE VPDIYLRN+ LD+QV ALR++L + + I E+A+GTWDKFR +RD H+MHH+RVVQEK L+ +K+L+++ AY P L EL KY++AMKEKMLM+LERDR AK +A+EAQ++A++++ D+ + S + V G + K K D+KLP E + N P D F P ++R L K+F+GHLNS++AVAFHP+ +VATVSDDETWK+WS+PNC
Sbjct: 100 AMSTQVRPSVVDDFIRNFLIKIAMPRTLDTFNTEWYELMAKGKLKEEDIGVVPDIYLRNQALDDQVKALRKQLDETKKITEKAKGTWDKFRHQRDVHKMHHQRVVQEKNLLMDKIKKLRKNIAAYEPLLAELRSKYEVAMKEKMLMRLERDRCMAKADALEAQVRALEQK------DSKSANSKSSPAKSVLGGTK-----------------------KKKTDTKLPAENAAN-PNADKRFDPIQIKRVELVKTFQGHLNSIAAVAFHPKNPVVATVSDDETWKLWSMPNC 361
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Match: A0A1V9Y4S7_9STRA (Flagellar protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y4S7_9STRA) HSP 1 Score: 277 bits (708), Expect = 9.000e-80 Identity = 153/291 (52.58%), Postives = 202/291 (69.42%), Query Frame = 1
Query: 406 IITQVRPSVVDDFIRNFLIKVGLTRTLDSFNTEWYELQAKGRLGEEYTTKVPDIYLRNEELDEQVVALRQELTKMQAIAERAQGTWDKFRKERDFHRMHHKRVVQEKGRLVTDLKRLKQHFKAYGPTLKELERKYQLAMKEKMLMKLERDRVKAKNEAIEAQMKAMQEERGISDQDAAAGYGVGSRVRPVRGPGQPGGEQALSPISAPPKNPQPTMGVKHKNDSKLPNEESVNNPFLDLVFQPPTVERFALRKSFKGHLNSVSAVAFHPRKAIVATVSDDETWKIWSVPNC 1278
I TQVRPSVVDDFIRNFLIK+ + RTLD+FNTEWYEL AKG+L EE VPDIYLRN+ LD+QV ALR++L + + I E+A+GTWDKFR +RD H+MHH+RVVQEK L+ +K+L+++ +Y P L EL KY++AMKEKMLM+LERDR AK EA+EAQ++A++++ S GS+V P + S +S K K D+K+P E VN P D F ++R L K+F+GHLNS++A+AFHP+ ++ATVSDDETWK+WS+PNC
Sbjct: 94 ISTQVRPSVVDDFIRNFLIKISMPRTLDTFNTEWYELMAKGKLKEEDIGVVPDIYLRNQALDDQVKALRKQLDETKKITEKAKGTWDKFRHQRDVHKMHHQRVVQEKNILMDKIKKLRKNIASYEPLLAELRTKYEVAMKEKMLMRLERDRCIAKAEALEAQVRALEQKDSKS---------TGSKVSPSK-----------STMSG---------SKKKKVDTKIPAENGVN-PNADKRFDSVQIKRVELVKAFQGHLNSIAAIAFHPKNPVIATVSDDETWKLWSMPNC 354 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.156.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.156.2 >prot_P-littoralis_Contig75.156.2 ID=prot_P-littoralis_Contig75.156.2|Name=mRNA_P-littoralis_Contig75.156.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=632bp MSTVDLDDERAVLEVVEFSDSEDEDFDYKAVEEDFSDEEDGQHEDLSAALback to top mRNA from alignment at P-littoralis_Contig75:547948..555684+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.156.2 ID=mRNA_P-littoralis_Contig75.156.2|Name=mRNA_P-littoralis_Contig75.156.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7737bp|location=Sequence derived from alignment at P-littoralis_Contig75:547948..555684+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:547948..555684+ >mRNA_P-littoralis_Contig75.156.2 ID=mRNA_P-littoralis_Contig75.156.2|Name=mRNA_P-littoralis_Contig75.156.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1896bp|location=Sequence derived from alignment at P-littoralis_Contig75:547948..555684+ (Pylaiella littoralis U1_48)back to top |