mRNA_P-littoralis_Contig75.154.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A6H5JMI1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI1_9PHAE) HSP 1 Score: 311 bits (798), Expect = 5.130e-102 Identity = 160/196 (81.63%), Postives = 175/196 (89.29%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWEDQLDINKQMVHGKKSCAETVYASELVKSGVYF 818
MAFFGLTALGPQN FQVSLLDFSYLDVFTA D EKAF++VD+EKRG + S+QVEAFLTELYHGKPK+ DLARF+EK K+ EG E RVTL++IQS M QL+KEVEE+TNQAKWHKGSGSD +SNQ+FRE VRRHEYIARGPRERYARTVTAVQEHGW+DQLDINKQMVHGKKSCAETVYASELVKSGVYF
Sbjct: 1 MAFFGLTALGPQNSFQVSLLDFSYLDVFTALDIEKAFNIVDQEKRGHIHSDQVEAFLTELYHGKPKACDLARFMEK-------KSSFEGQENRVTLDDIQSTMTQLRKEVEEETNQAKWHKGSGSDLSSNQNFREKVRRHEYIARGPRERYARTVTAVQEHGWQDQLDINKQMVHGKKSCAETVYASELVKSGVYF 189
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: D8LF25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF25_ECTSI) HSP 1 Score: 147 bits (370), Expect = 7.100e-39 Identity = 77/110 (70.00%), Postives = 90/110 (81.82%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEV 560
MAFFGLTALGPQN FQV+LLDFSYLDVFTA D EKAF++VD +KRG++ S+QVEAFLTELYHGKP + DLARF+EK K + EG E RVTL++IQS MAQL+KE
Sbjct: 1 MAFFGLTALGPQNSFQVALLDFSYLDVFTALDMEKAFNIVDHQKRGYIHSDQVEAFLTELYHGKPIACDLARFMEKKKSL-------EGQENRVTLDDIQSTMAQLRKEA 103
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A7S2V2Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y5_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.780e-36 Identity = 78/196 (39.80%), Postives = 122/196 (62.24%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWEDQLDINKQMVHGKKSCAETVYASELVKSGVYF 818
MAFFGLT+LGPQ+ F SLLD L++F+ D E AF VDR+ GF++ ++EA L E+Y G +++ F+ K T +G +++ E S + +L++EVEEQ + G S F+SN +RE + +H + GP ++Y + +TA QE+GW+ + ++++ GKKSC ET+YA+ELVKSG+Y+
Sbjct: 1 MAFFGLTSLGPQDSFATSLLDTINLNIFSDEDFETAFKKVDRDGSGFIERNEIEALLREVYRGDCPRNEVEMFMAKFD------TNQDG---KISWEEFVSTLCELRQEVEEQEKAKEQRVGPASQFSSNLEYRENMHKHTRLNTGPTDKYNQPMTASQEYGWQHK-EVDQAPRAGKKSCEETLYAAELVKSGMYY 186
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A836CBM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM4_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.280e-23 Identity = 75/198 (37.88%), Postives = 102/198 (51.52%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWEDQLDINKQMV--HGKKSCAETVYASELVKSGVYF 818
MAFFGLTALGPQN F SL S L +F+ D AF+ V E G L + V A L LY G D ARF + + E G G + + I A+ QL+ ++ + W + TSN+ +R VRRH + P+E+YA + A Q+ GW+ + H KKSC ET +A+E+VKSG+YF
Sbjct: 1 MAFFGLTALGPQNTFACSLKGASDLQIFSDEDWRLAFEAVAVE--GALRRDDVTALLEALYRGPAPVDDAARFAK-----AAEAALGSGWDA-LACAQILRAVQQLRADMAQLQADEAWRARASCGTTSNEEYRNRVRRHCGLHLAPQEQYAVPLKAAQDLGWQQRPPGEGAAAGAHSKKSCEETKFAAEMVKSGMYF 190
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A7S2TRH2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRH2_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 1.020e-20 Identity = 66/199 (33.17%), Postives = 106/199 (53.27%), Query Frame = 3
Query: 234 AFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGK-PKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWE--DQLDINKQMVH-GKKSCAETVYASELVKSGVYF 818
+FFGL ALGP + F +LL + FT + EKAF +D++ G++ ++V LT LY K P ++ F+ K + K G ++T E + A+ +LK +V+++T + S +S +H+ RGP++ YA +T QE GW+ + + NK H K SC ETV+ASE++KSG+Y+
Sbjct: 8 SFFGLVALGPNDPFSHNLLKNMNMSKFTEEEFEKAFKSIDKDGNGYISIDEVRYLLTSLYSMKNPPEEEVKMFV---KFFDKNKDG------KITYEEFKEAVPKLKGKVQKETKV-----NHATTTNSVESLYRVRNKHKRNCRGPQQLYAAPMTTAQEVGWQTASKAEKNKNDPHMPKNSCEETVFASEMIKSGIYY 192
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A7S4DF25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DF25_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 1.740e-18 Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 3
Query: 234 AFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGK-PKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQT--NQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWEDQLDINK-----QMVHGKKSCAETVYASELVKSGVYF 818
+FFGL ALGP + F +LL + FT + EKAF +D++ G++ ++V LT LY K P ++ F++ + K G ++T E ++A+ +LK++V ++T N AK S +S +H R P++ YA +T QE GW+ K QM K SC ETV+ASE++KSG+Y+
Sbjct: 25 SFFGLVALGPNDPFSHNLLKNMNMSKFTEEEFEKAFKSIDKDGNGYISIDEVRYLLTSLYSMKSPPEEEVKMFVQ---LFDANKDG------KITFEEFKNAVPKLKEKVRKETKMNHAK-------TTNSAKSLHRVRNKHVRDCRAPQQLYATPMTTAQEVGWQTASKAEKNENDPQMP--KSSCDETVFASEMIKSGIYY 209
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A7S3GWS7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWS7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.580e-11 Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMK--IISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQEHGWEDQLDINKQMVHGKKSCAETVYASELVKSGVYF 818
MAFFGLTALGPQN F+V+ F Y+ VF D + A+ V+ + ++ L+HG +++ E + + +T ++L++ M +L++E +EQ+ + +F S +R++ + + + +T QE+GW Q D+ K G+ T +A+EL+K+G+Y+
Sbjct: 3 MAFFGLTALGPQNAFEVNSTTFRYIQVFDEQDFKDAWIKVNGPDALHVHRPRLPLVFKALFHGPVPANEQGPISEAFENGVFETPET--------ISLDSYLKIMVRLREEADEQSRAREGRPNPNCEFNSTSEMSLAIRKNAAMKHELQTKLTAPLTGTQEYGWSKQ-DL-KAPTAGRGGSDITKFAAELIKNGIYY 190
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Match: A0A482S0M9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0M9_9ARCH) HSP 1 Score: 64.3 bits (155), Expect = 1.170e-8 Identity = 45/160 (28.12%), Postives = 77/160 (48.12%), Query Frame = 3
Query: 231 MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSEQVEAFLTELYHGKPKSSDLARFIEKMKIISREKTGGEGGECRVTLENIQSAMAQLKKEVEEQTNQAKWHKGSGSDFTSNQSFRETVRRHEYIARGPRERYARTVTAVQE 710
MAFFGLTALGPQN F + + YL +F D A+ + + R F ++ A + L+HG +D+ +E + + + G V +A L+K+ E+ + +F S+QSFRE++R++ I + + + + +TA E
Sbjct: 1 MAFFGLTALGPQNAFAANAITRRYLQIFDEQDFHDAWKKANGD-RTFCAKNKIPAVMEALFHGPVPDNDMNPVVEAFESV-------DDGSGMVAFATFMRIIAHLQKDAEKAEHVHDGKPRPECEFISSQSFRESLRKNAAIKQNFQNKLSAPLTATME 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.154.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.154.2 >prot_P-littoralis_Contig75.154.2 ID=prot_P-littoralis_Contig75.154.2|Name=mRNA_P-littoralis_Contig75.154.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp MAFFGLTALGPQNCFQVSLLDFSYLDVFTASDTEKAFDLVDREKRGFLDSback to top mRNA from alignment at P-littoralis_Contig75:482787..491648+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.154.2 ID=mRNA_P-littoralis_Contig75.154.2|Name=mRNA_P-littoralis_Contig75.154.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8862bp|location=Sequence derived from alignment at P-littoralis_Contig75:482787..491648+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:482787..491648+ >mRNA_P-littoralis_Contig75.154.2 ID=mRNA_P-littoralis_Contig75.154.2|Name=mRNA_P-littoralis_Contig75.154.2|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig75:482787..491648+ (Pylaiella littoralis U1_48)back to top |