mRNA_P-littoralis_Contig75.117.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig75.117.1
Unique Name	mRNA_P-littoralis_Contig75.117.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: D8LEZ8_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ8_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 5.740e-68
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 2

Query:   80 STSSAP-RPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLE-EGK 514
            S SS+P RP  +   K  G KG RGRVKGSGS++QSLRAGLTFPV+RVARHLK+AKL+SRVGKGSAVYLAA+MEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLL DVTIAEGGVLPNIHS+LLPKK A KLE +GK
Sbjct:   19 SDSSSPLRPVHRNKGKTGGNKGGRGRVKGSGSISQSLRAGLTFPVARVARHLKEAKLASRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLADVTIAEGGVLPNIHSILLPKKVAAKLETDGK 165

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.050e-46
Identity = 91/127 (71.65%), Postives = 105/127 (82.68%), Query Frame = 2

Query:  137 KGSRGRVKGSGSVT-QSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTA-TKLEEG 511
            KG  GR K  G VT +S +AGL FPV+RV R+LK+ K ++RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNKLL +VTI+ GGVLPNIH+VLLPKKT   KL +G
Sbjct:    4 KGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKG 130

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A0W8DCN3_PHYNI (Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DCN3_PHYNI)

HSP 1 Score: 171 bits (432), Expect = 1.600e-46
Identity = 89/131 (67.94%), Postives = 108/131 (82.44%), Query Frame = 2

Query:  122 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 514
            K K   G RG+ KG GS T+S +AGL FPV RVAR+LK+ + + R+G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGK-KGKGS-TRSAKAGLQFPVGRVARYLKKGRYAQRIGGGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 132

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.420e-46
Identity = 87/125 (69.60%), Postives = 101/125 (80.80%), Query Frame = 2

Query:  137 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEG 511
            KG RG  +G    +QS +AGL FPV+R+ R+LKQ + + RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RI PRHIQLA+RNDEELN+LL +VTIA GGVLPNIH+VLLPKKTA K   G
Sbjct:    6 KGGRG-AEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKAAAG 129

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: UPI001425979E (late histone H2A.2.2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425979E)

HSP 1 Score: 169 bits (428), Expect = 4.900e-46
Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 2

Query:  137 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATK 499
            +G   + K   SV++S +AGL FPV R+AR+L++ K S R+G G++VY+AA++EYL AEILELAGNA RDNKK RI PRHIQLAIRNDEELN+LL DVTIA+GGVLPNI SVLLPKKTATK
Sbjct:    4 RGKGAKAKSVKSVSRSQKAGLQFPVGRIARYLRKGKFSQRIGSGASVYMAAILEYLSAEILELAGNAARDNKKSRIVPRHIQLAIRNDEELNRLLSDVTIAQGGVLPNIQSVLLPKKTATK 124

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A0W8DCQ0_PHYNI (Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DCQ0_PHYNI)

HSP 1 Score: 169 bits (427), Expect = 8.480e-46
Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 2

Query:  122 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 514
            K K   G RG+  G  S T+S +AGL FPV RVAR+L++ + + R G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGKKTGKSS-TRSAKAGLQFPVGRVARYLRKGRYAQRTGSGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 133

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: UPI001CB89F2A (histone H2AX n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB89F2A)

HSP 1 Score: 169 bits (427), Expect = 1.160e-45
Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 2

Query:   92 APRPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK*G 520
            AP+    A  +    KG RG+ K + SV++S +AGL FPV R+AR LK  K + RVG G+ VYLAAV+EYL AE+LELAGNA RDNKK RI PRHIQLA+RNDEEL+KLL  VTIA GGVLPNIHS LLPKK  +  E+G+ G
Sbjct:    2 APKAAATATAEGDAKKGGRGKAKNTKSVSRSSKAGLQFPVGRIARFLKAGKYAQRVGGGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKGGSGKEKGEIG 144

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: H3GAL3_PHYRM (Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3GAL3_PHYRM)

HSP 1 Score: 168 bits (426), Expect = 1.180e-45
Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 2

Query:  122 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 514
            K K   G RG+  G  S T+S +AGL FPV RVAR+L++ + + R G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGKKTGKSS-TRSSKAGLQFPVGRVARYLRKGRYAQRTGSGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 133

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A5J4Y0U0_9CHLO (Histone H2A n=3 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0U0_9CHLO)

HSP 1 Score: 167 bits (424), Expect = 1.450e-45
Identity = 83/121 (68.60%), Postives = 99/121 (81.82%), Query Frame = 2

Query:  146 RGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEE 508
            +G+  G   V++S +AGL FPV R+AR+LK+ K ++R+G G+ VYLAAV+EYL AE+LELAGNA RDNKK RI PRHIQLA+RNDEEL+KLL  VTIA GGVLPNIHSVLLPKKT  K EE
Sbjct:    6 KGKTAGKKQVSRSSKAGLQFPVGRIARYLKKGKFATRIGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGGVTIAAGGVLPNIHSVLLPKKTGKKAEE 126

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BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: H2A_PLAFA (Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 RepID=H2A_PLAFA)

HSP 1 Score: 167 bits (424), Expect = 1.750e-45
Identity = 84/121 (69.42%), Postives = 95/121 (78.51%), Query Frame = 2

Query:  137 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATK 499
            KG  GR K S   + S +AGL FPV R+ R+LK+ K + RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNK L  VT A GGVLPNIH+VLLPKK+  K
Sbjct:    4 KGKTGRKKASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPKKSQLK 124

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEZ8_ECTSI	5.740e-68	82.99	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
A0A7S2CIK1_9STRA	1.050e-46	71.65	Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687...	[more]
A0A0W8DCN3_PHYNI	1.600e-46	67.94	Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=...	[more]
A0A835ZBB6_9STRA	3.420e-46	69.60	Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
UPI001425979E	4.900e-46	69.42	late histone H2A.2.2-like n=1 Tax=Anneissia japoni...	[more]
A0A0W8DCQ0_PHYNI	8.480e-46	65.65	Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 Re...	[more]
UPI001CB89F2A	1.160e-45	62.24	histone H2AX n=1 Tax=Erigeron canadensis TaxID=729...	[more]
H3GAL3_PHYRM	1.180e-45	65.65	Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3G...	[more]
A0A5J4Y0U0_9CHLO	1.450e-45	68.60	Histone H2A n=3 Tax=Trebouxia sp. A1-2 TaxID=26089...	[more]
H2A_PLAFA	1.750e-45	69.42	Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 Re...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig75	contig	P-littoralis_Contig75:385229..393199 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LEZ8
Preferred name	H2AFY
PFAMs	Histone,Histone_H2A_C,Macro
Model size	2023
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K11251,ko:K16617
KEGG Pathway	ko04217,ko04974,ko05034,ko05322,map04217,map04974,map05034,map05322
Hectar predicted targeting category	other localisation
GOs	GO:0000122,GO:0000182,GO:0000228,GO:0000775,GO:0000785,GO:0000786,GO:0000790,GO:0000792,GO:0000793,GO:0000803,GO:0000805,GO:0000976,GO:0000977,GO:0000979,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001739,GO:0001740,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005730,GO:0005813,GO:0005815,GO:0005856,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006342,GO:0006355,GO:0006356,GO:0006357,GO:0006469,GO:0006996,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007549,GO:0008104,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010385,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015630,GO:0016043,GO:0016458,GO:0016479,GO:0019207,GO:0019210,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0030234,GO:0030291,GO:0030856,GO:0030858,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033127,GO:0033128,GO:0033365,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034502,GO:0034613,GO:0034622,GO:0034728,GO:0040029,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045682,GO:0045684,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045840,GO:0045859,GO:0045876,GO:0045892,GO:0045931,GO:0045934,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051348,GO:0051569,GO:0051572,GO:0051641,GO:0051726,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060322,GO:0060341,GO:0061085,GO:0061086,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070199,GO:0070727,GO:0071103,GO:0071168,GO:0071169,GO:0071824,GO:0071840,GO:0071900,GO:0071901,GO:0072594,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098687,GO:0098772,GO:1901363,GO:1901836,GO:1901837,GO:1901987,GO:1901988,GO:1902275,GO:1902679,GO:1902749,GO:1902750,GO:1902882,GO:1902883,GO:1902884,GO:1903506,GO:1903507,GO:1903827,GO:1903828,GO:1904814,GO:1904815,GO:1905268,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
Exons	5
Evalue	1.98e-75
EggNOG OGs	COG5262@1\|root,KOG1756@2759\|Eukaryota
Ec32 ortholog description	Histone H2A variant
Ec32 ortholog	Ec-21_006160.1
Description	Histone H2A
Cds size	453
COG category	B
BRITE	ko00000,ko00001,ko00536,ko03036,ko04147

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig75.117.1	prot_P-littoralis_Contig75.117.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig75 385293..391693 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791549.6447227-UTR-P-littoralis_Contig75:385228..385292	1680791549.6447227-UTR-P-littoralis_Contig75:385228..385292	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig75 385229..385292 +
1680791549.743479-UTR-P-littoralis_Contig75:391693..393199	1680791549.743479-UTR-P-littoralis_Contig75:391693..393199	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig75 391694..393199 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791549.6595056-CDS-P-littoralis_Contig75:385292..385327	1680791549.6595056-CDS-P-littoralis_Contig75:385292..385327	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig75 385293..385327 +
1680791549.6793919-CDS-P-littoralis_Contig75:389013..389103	1680791549.6793919-CDS-P-littoralis_Contig75:389013..389103	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig75 389014..389103 +
1680791549.692491-CDS-P-littoralis_Contig75:390024..390073	1680791549.692491-CDS-P-littoralis_Contig75:390024..390073	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig75 390025..390073 +
1680791549.7138624-CDS-P-littoralis_Contig75:390805..390865	1680791549.7138624-CDS-P-littoralis_Contig75:390805..390865	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig75 390806..390865 +
1680791549.7296772-CDS-P-littoralis_Contig75:391474..391693	1680791549.7296772-CDS-P-littoralis_Contig75:391474..391693	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig75 391475..391693 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig75:385229..393199+
coding sequence from alignment at P-littoralis_Contig75:385229..393199+

protein sequence of mRNA_P-littoralis_Contig75.117.1

>prot_P-littoralis_Contig75.117.1 ID=prot_P-littoralis_Contig75.117.1|Name=mRNA_P-littoralis_Contig75.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp
MSGNPSTSSAPRPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVS
RVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRI
TPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK
*

mRNA from alignment at P-littoralis_Contig75:385229..393199+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig75.117.1 ID=mRNA_P-littoralis_Contig75.117.1|Name=mRNA_P-littoralis_Contig75.117.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7971bp|location=Sequence derived from alignment at P-littoralis_Contig75:385229..393199+ (Pylaiella littoralis U1_48)
GTTCAAGCTTTCTCTCAACATCAGCGTAAACACGCGCCAACATCACAACA
CCACACAACGCAGCATGTCGGGAAATCCCAGCACCTCCTCTGCTCCCAGG
TGCGTTGCATCACATCGGTCTCTGCCACACAAACGAAATAGACTATACCT
ATCATACCCAGTTGAAACACATGTTTTGCGGGCCTCGGCGCCTCCCGGTT
GCACTGTAAGTTAGACTACAGATCGAAATTTACCAGTTTTTTGGTACCCT
GCTGTGATCCCCGCCGGCCGCCTAGCATTGGTTGGACCAGGACGGAATAC
ACAGGAGGTTAGGCTGGGCGTATAGACGGGAACCGTTGTTGGTTGTTGGT
GAGGTATACAACAGAAAACGTGAACAAGACCGATGTCCGCGTCGGCATTG
ATTATTGCACTAGATAGACACGACTTTCAAAATTCGAAATTCCCGAGACA
GACTCATCTTGAGAAATCTAACGGAAAGCAGCTGTATGAGAACTCCCAGC
TGTCAGTTCTCAGCGCAAGTTTGTTCTTTGCACAAGTACATAACTGCTGT
TATGCTTTGTAGCGGCAAAGCAAATCAACGGCCCGATTCCCGATTGCCGG
CGGCGGCAGGGTACGTCAACAGGTATCATACGACATGTTTCCTCATTACA
GCGACGCTACGATACTCCGCCGCTTATATCGGATTATTTCGGATGAGAGA
AAGCAGCAGGGACACCCGTATGATAGCAGCAGTTTTCACACAAACTTCTA
CAGCAGGACAGGTCACATGTGTGGTCCCTACAGGAAAATTGCGATATACC
ATACTCCGGAGTATATTTTTTTATGCACTCGAGAAAAACTTATGGAACCA
CAACTCCTGGCATTCCTCCGCGTTGGATTCCTGGAATAGTGCAGATCCCT
AATTCGGCAGAACTGGAATAGGACAGCTGGCCTGTTTCCTACAGAGTGGC
GAAGTACGAGAGTTGTTCGTAGCTTCTTGCACTGGGGCCTTCGCGCCAAA
GTTCATGTAGGTGTGGTTCCAGGCTCAAATGGACCCAATATCCAAAACAC
TTTTCAAATATGGATCGTTCTTCGCTATACATATAAGAAACATAAAGTAA
GTACCGTACAGTAATCATGCGAGTCATCGCACCCCCGTATTAGCTTTTTG
CATTGCGTAGTGCTCCATAACCAGGAGAGTGCGAACACCAAACGACCCGT
CATACGAAAGCTCTCGACGAGATCTTTCCAAAACCACCCTTTTCGGCAGT
GGTACTCTCCTGGTTGTGGAGCAATACGGAATGCAAAAAGCTCACACGGG
GGTGCGATGACTCGCATGATTATGGTAGTACCATGATGGGTAGATTGCAT
ATATTTGTGGAATTCAAAACGGTATTCTTCTCTGTAGGAACGTAAAATCT
ACTGCTGCACGAAAAACATCAAATCGCCATCATCACTATGCGACGGATGA
TGCAAACAGTACAGATATAGATCGTAAACACTCAACTCTTGGTGTAACGT
GTGTCACACAAGACGACCACCAAATTGTCTTGTTGAGCCTGATACCCTCA
GGGGAGCTGCAACGGTACACTGGTTGTTGAGTATAGAAACACTGGTAGAC
GTACTTCACTCTTTGTGTTCGTTGCAATATCTGCTCCAGATCCTTGTCTG
GAGAGAGGCGAACACATTGATGTTTTTGTAAGTTACAAAAAAAAATCATA
CATACGTATCTACGTGCACTCGTATGATATGGTTTTGTACAGCTGTAGAC
CACAGCTCTCAACCCTCTGTGTAGCCAAGTAGATATCGGCGGTTTCGGCC
ATTTTGGACTGTGTTGCAATTATCGTTTTCTACTGCTGTAGTACAGATCC
CTAACTCGGCACCCCTCCACGCCCATCTATCCTTGTGTCAGCCAACACCG
CCAAAGTGTGGCTGTGTTTGGTCAAGTATTGCTCTGGGGCCTTTGGCGCA
AAGATGGCCCTCAAGCCTTGCGGTGCAACTGCCAGGGTGTTGACGTGACC
TCCCAACTCCGCACCGGCAGCGCAACCAATGTCAGCCCTACCATCAATCT
CAGCGCCCGCAATTTACACAAGCGCCAAGATACCGTAATCATGCGAGTCA
TCGCACCCCCGTGTTAGCTTTTTTGCATTCCGTATTGCTCCATAACCAGG
AGAGTGCGAACACCAAACGACCCGTCATACGAAAGCTCTCGACGAGATCT
TTCCAACACCACCCTTTTCGGCAGTGGTACTCTCCTGGTTGTGGAGCAAT
ACGGAATGCAAAAAAGCTAACACGGGGGTGCGATGACTCGCATGATTACG
ATAATGGCCCTCGCTCGAGCCCTTCCTCTTATTTCGCGCTGGTTCCTGCC
CTCGGCGCAGAGCTTGGTGGTGGTGGTGGTGGTTACTCTGTGCAGGCCTC
TCGCGATTACCGGCGGGTGTCACAGGGGGGGGCTGAACAATTGTACTACC
CGCGAATACAACACGCTTGCCATTTTGAAGACATTTTTTTTTCAATTCCT
GTAGGGACCAACACATGTGAGGTGCCATGTCGTTGCGTCCCTTGTGTTCG
TAGTCCAGTCGGGTGTCGTTTACAAGTACGAAGCGTCAGATCATGTTTTA
CCATACCACAAAAACTAGTACAAGTACTCGTAGTTGAAATATATACAGAG
AGAGAAGTACAGCAGTAACACAGTCGTATGAGCTGTCAAGTTGTACATCA
GTGATGGAGAGTAGTAACGTGCGGTAATCGCACACTATTCCACTTTCAGC
GATGCTGCTGTGCGTTCGGAGTGCAACTGCTGTAAGTCGTACAGCAGGAA
TAGACATCAGTGAGCGTAACCGTACACGACTGTGACAGGTCTTTCAGCAA
TACTCCTGCTGTGCGTTGTAGTGCATCTGTTACAGTCCCCATGATACGAG
ACGACAGCAGAAAAAGTTGGTACAAACCTGCGCACCAGCCAAGATAACCA
TATGATATCGCTGCATCGAGTCACAAGGCAACACAGAGTGAAGTTCTTGA
CGAGTAGACTTGGGGGGTGCTCCGGGCGGGTTACACCTTTCTGATGGTGG
TTCAACCCACGGGATCCGGAGTTACCGTGTGTGCGTGTGTGTAACGGTCC
CATCTATTCTGGACGCCACTCTATGATATGTCCTTTCGGAATACAACTGT
ATGATAGTAGGTACACGCTCCAGCCGGGGTCACACAGGGGGAAGTCAACA
CAGGAGTTTTTTTTTTTCTTCTCCACTTCCCCCACTGCGGTGCTTTGCTT
TGTGCTTTTGCCTTTCCTGGTCATTTTTTAACGTGCGCCGAGAAAATACG
GCAATAGCCTGGGTCGGCAGTCCTCGCCAAGGCGGTAGAGAACACGGCAT
AACTACTGCTGTGTGTACGTCGATGACCCCGGTCTGAATGAAGGCGGATC
CGCTCACCTACACACAGCAGTTTGAAATTGTTCGTCGTGATGTCTTCACA
GCAGTACGAGTATGGTAATAAAAAGACTGTCGACCGCCAGAGGCGCCCCT
GCCACCAGCTGAAGTGCCGCCCGTGATACACGCGTGCACTTTGGTATACT
GCTGTGCTGCTGTAGTAGCAAAGAGCCCTTTACAGCCCAAAAAGACGCCC
CCAACAATCGGGGAAAAAAACTGTATGATGGTGCATGCTGTACAGCAGCA
TCATCGAAATATACCGCTGTATATATTGCTGTTTGATCCCGCCAGTAAAT
CTTGGTCGCCGGCATGAAGCGCGTGATCTCCCCCTTTCCTGTTTACTCCT
GTTTAATGCTATTTTTTTCTCAAATCTCAACGCAGGCCTTTTCAGAAGGC
GCCGGTGAAAGCAAAGGGCCTCAAGGGGAGCCGGGGTAGGGTCAAGGGCA
GCGGGTCGGTCACCCAGTCGCTCAGGTGAGTCGCGTTCAGGTAGTGCCCT
CTATGATATTGTTGAGATTTCATCATGTGCTGTGACTTGTGTACATCTTC
TCCGCGTGCTTTCTTTGTTTCTCTCGGAAAGCCATCCAGAGTGCAGAGTC
TACGACAAAGAGAAACAAGAATTAGGCGCGCAAGCGCATCGCCACGTCGT
TTATACAACTTTCGCTAAAATTTGAAAACCGGAAAATTTGGGAACGTTAC
CGGATAGTGTGAGGTCGTCGGTATTTGCTGTCGGTGCTACTCTCGACCTC
TCTAGGCCCGTCATGTGACGTGAAATGCCACCCTAACCCGGATCAGATTT
GGTCAAATTCGTAGTCGACAGGTTCTCCGGAATGCCGGGACAGTAGTGTG
TTTGCAAACGCCTCCGAGATAGGCAACGAGGCTTTTCCCGTTGTACAGGA
ATAAGAAGGAAAGAATCGTCACGAGGGAAGGGGAATAATGTTTCACTAAG
GCCACGTTCCCCCGTGTGTCTCGGGTCCACTCTGTTGGTCATGTGTAGCT
GGCGATTTGCATGTTTCACATCATAGGACAGCGATGTTTCACAGGGCGGC
TAGTTCCCGTGCAGTTTGACCGGGGTTTCAACTTTGTTCTGCAGCGTATC
ATAAAATAAAACCAAGTGGGTGCGGCAGCGCCGTCTCTCATGATCTGTGA
TCGAATACGAAGGGGGGGGTTCGATGTGTTTGCATGTGACGAAGACTACT
TGCGCTGTGACACATCGTTTGAGAGGGTCATCTTGCCGGAGCGATCTGTG
CTCCGGGGTAAAATGTCTTGCTCACCTCCCGTGCGAATCATACTGTACCC
TCCTTCCCGCTATCTTGTCCGATCTCCTGTCTGTGGTGATCTTCTGGTGG
TGATGGATGCGGCGCGCTCCATCTGGTGTCGTGGTGACGTAACCAGGGCT
GGATTGACCTTCCCTGTTTCTCGCGTGGCGAGGCACCTCAAGCAGGTGCA
GAACTAGTCGTACAGCACCACGGCAAGACAAAACGGCAGAATCAATAGCG
CGTTGGTGGGGACTGCTGTGCAATACATCTTCCTTGTGTCATACATGTCG
CATTAAAAACAAGTTTAGCGTTGTGTGTTGGGTGGGCTGTAAACTCAGGT
CAAGTTCGTGTGTAGTCGTGTTGTTTGTATGAATAGCCGCGGTGTGCCCT
CACTTTGACACACGGACACGAGTCACATCCGTGTTGCGTATCAGTGCAAC
CAATACTTCTCATGGCTGCCGAGCCACTGCTACCGTCGGGGTGACGCCCT
TGTCGGAACATCTCCCTCTGAAATCTTCGCTGCGGGGGCACAAGGAAAGT
GGCCCGACATCAGGCGTGTACCGGTAGTAGACCCATTTCCAGTGGCGGCT
TTAATCGCGTCCTGGTAGAAGTGGGGTTGGAAGGAAAGGTTTCATGCTTC
AGTCCGTTTTCGCCACTTCTCCGTGAGAAGAAGCTGGCTCGCCCTAGTAT
CCAGACGAGAGGGACAGCAGTGCATCATGCTCATCCCTTTGCCGAGCGCT
TCGAGAGCTTACACCATTGTTGCTGCGACATTGCCGTGTTTTTTTGTTTT
TTTGAGCACTTGAAGATCCTTGTTGTTGATTTCGCCTCGTCAACCCCCCC
TTTCGATTCCACCACACGGCCATTGCCCGGGGGGCTGTGTGGTTGTTACT
GGCTTCGTGTCACTCCGTCCGTCGCAGGCAAAGCTCTCGAGCCGTGTGGG
CAAGGGGAGCGCCGTCTACCTGGCCGCCGTTATGGAGGTGCGGATCCAAC
TGTTTTTGTCGTTGTCGTCGCGAAAAGAAAATGCCTCTGCGCGCATCTGT
ACCGGTGCAGCCGCATTGGGGCAACTAAACCGAAACGAAACGTACCAACC
GAACCGAACCGAAATGAACCGAAACGAACCGGAGATCGCTTTTTTCTTCA
CGTGGAGTCATGTACTAATGACCTGCTTTGCCGGTCCTTCTCTCCACCCG
TCAGATACAGCATGGGTGCAGCACACCGGTATGATAGATTATGCGGCGGA
AGGCCGATGACATATCCGTCGTGCGTGTGCCGTTTTTAACCCCGCACGAA
AAAAGGGACGGCACACACTCACAGCACTTGTAGGAAGTAGCTTTTACGAT
ATTGCTCACTGACTCGCTTGCATCGCCGTGCGCCCCCGCGAAAGTTGGTC
GTCTTCGTGGGCTTCAGTCGCTCATAGTTTGTCCGTTAGTTTGCCACGCC
AAGATTGTCGTAGTGAGCTTCGGTCGCGCTCGGATTATCCGCTAGTTTGC
TATGTACGAATTTGCTACTCGTACCGTAGCCGCTGACGTAGGATCCCATT
CATCTCCCCGCTGCTGCTGTCCGCACCCAAACCAACCGAAAAACAGTATT
TGTGCGCCGAAATCTTGGAGCTGGCCGGCAACGCCTGCCGCGACAACAAA
AAGAAGCGTATCACTCCTCGCCACATTCAGCTGGCCATCCGCAACGATGA
GGAGCTCAACAAACTGCTGTGTGACGTCACCATCGCAGAGGGCGGAGTTC
TACCCAACATCCACTCGGTGCTTCTCCCCAAGAAGACCGCGACAAAGCTC
GAAGAAGGAAAATGAGGTGTATGTCCGAAACCCGGAGATAGAACGAGGGT
GTGTGTCCCCCGGATGTGGGGTTAGTTATCAGAGATTGTCGAGATCGGTC
GTTGAGTCACGGCCGTTCAACCAGGCAACACGAACAAACGGAAATCTCTC
TCTCTCTCTTCCTCTCTGTGCGTTCTGTCGTTGCCTCTGAGCGTGGTCGT
CAAACTCGTACAGGCTGTTCCATCGTCGCTTTGAGCTTTACGTATATAAG
GTTGCTGTCCCCCCTTTTTGCCGAGGAGGTGGCGGCGGCTGGCCTGCAGT
CGGACAATTTTGGTGTGTTTATTTTTTTATTTTGGATAGTGGTGGTCCCT
CTGTTCCAGGGTTGTCGCATTGGGCGTCGAAACAACATAGAGCTTATCAA
AGCGGCACACGTCGTTACACAGCCGCTGCTTGTTATATTGTCATGATAGG
TTTTTACAGTACGGAAGAAGCGCGTGTCGTGCTGAGAAGGCCGTCCTCAA
GTTCCCGCCTATTGAGCTGGTTTGTTGATTTCGTGAGGATGCTGATGGAC
TTAGTGGCGGGCCTTGAGTGGGGCAGCGGTAGAGACTGCCAGTTATTTTT
CGTGTTTTTTTGTGTGCGTGAACGCGGCGTTTATCGCATTGGCTTAGGCA
CACCCGCTCAGACAGCGTGTTTTCTTCTTCTCCTTTTTTTTTTTTTCACG
GGGGTACATAGTCGGTGTATGATATACTTCGTATAAAAGAGTTATAAATT
GTCGGCACGTGTCCGAAGAACGAGTTTAACATATACTTTTGTATCATGTA
GTAGTACCCTGGGGCTCCTTTTATCTATCTGCTTACCCCCCCGCAGTGGG
GACACTTACTTGCGAATGCCAGACAAAGGCCAAAACGTTTGTGTGGACGG
GGGAGTTGACGCGAATGGCCGGCGATTCATGCCGCGGACCCCCTCCGACA
ATCAGAGGTACCGAAGGTCCCCACGAGCTGTAGCCTGTGCCTGTTCTGTT
GAAAGAGCTTGGAAAAAGCTTGCATCAGACGTCATCTATGTCGTTCACAG
CTTTTTTATGGGAAATTTGTCTACTAACTGTATGATTTTCCGACAGGCCG
ACAGGATCCTGCCAGCTGTGCAGGGGGCAATGCATGAGGGGCATACAGGG
GGCTACGGTTTAAGAGAGCTGAGTGTAAGATAACTGCCGGTTCAAGAGGG
GTGGAATGGCTGGCACACCCCTCTCTTGAACCGTGTTTTTTTTTTCCCCT
CTTGAACCGCAGCCAAAAGATTCGGTTTAAAAGAAGAAAAGAAAATGCCG
GCTTAAGAGAGGTTTGTAGAATTTTTCTTGGCTTGGCACACCCTCTCAAA
ACCGTGTCCCCCACTGTAGGCGCTGACCGTAGGTAGCGAAGCTAGAGCAA
CAAAAACGAAGCCAACCTTGGGGGGCCGGACGCCCGGATGGTTAGACTCC
TGAGGCACAAGCGCGTAGTTTGAATCGGCAGCTAAAAAAAAAACAGACTT
CCCGTGTTGCGCGGAGCGTGT

Coding sequence (CDS) from alignment at P-littoralis_Contig75:385229..393199+

>mRNA_P-littoralis_Contig75.117.1 ID=mRNA_P-littoralis_Contig75.117.1|Name=mRNA_P-littoralis_Contig75.117.1|organism=Pylaiella littoralis U1_48|type=CDS|length=453bp|location=Sequence derived from alignment at P-littoralis_Contig75:385229..393199+ (Pylaiella littoralis U1_48)
ATGTCGGGAAATCCCAGCACCTCCTCTGCTCCCAGGCCTTTTCAGAAGGC
GCCGGTGAAAGCAAAGGGCCTCAAGGGGAGCCGGGGTAGGGTCAAGGGCA
GCGGGTCGGTCACCCAGTCGCTCAGGGCTGGATTGACCTTCCCTGTTTCT
CGCGTGGCGAGGCACCTCAAGCAGGCAAAGCTCTCGAGCCGTGTGGGCAA
GGGGAGCGCCGTCTACCTGGCCGCCGTTATGGAGTATTTGTGCGCCGAAA
TCTTGGAGCTGGCCGGCAACGCCTGCCGCGACAACAAAAAGAAGCGTATC
ACTCCTCGCCACATTCAGCTGGCCATCCGCAACGATGAGGAGCTCAACAA
ACTGCTGTGTGACGTCACCATCGCAGAGGGCGGAGTTCTACCCAACATCC
ACTCGGTGCTTCTCCCCAAGAAGACCGCGACAAAGCTCGAAGAAGGAAAA
TGA