prot_P-littoralis_Contig75.117.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.117.1
Unique Nameprot_P-littoralis_Contig75.117.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length151
Homology
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: D8LEZ8_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ8_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.210e-74
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0
Query:    6 STSSAP-RPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLE-EGK 150
            S SS+P RP  +   K  G KG RGRVKGSGS++QSLRAGLTFPV+RVARHLK+AKL+SRVGKGSAVYLAA+MEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLL DVTIAEGGVLPNIHS+LLPKK A KLE +GK
Sbjct:   19 SDSSSPLRPVHRNKGKTGGNKGGRGRVKGSGSISQSLRAGLTFPVARVARHLKEAKLASRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLADVTIAEGGVLPNIHSILLPKKVAAKLETDGK 165          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.090e-52
Identity = 91/127 (71.65%), Postives = 105/127 (82.68%), Query Frame = 0
Query:   25 KGSRGRVKGSGSVT-QSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTA-TKLEEG 149
            KG  GR K  G VT +S +AGL FPV+RV R+LK+ K ++RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNKLL +VTI+ GGVLPNIH+VLLPKKT   KL +G
Sbjct:    4 KGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKG 130          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A0W8DCN3_PHYNI (Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DCN3_PHYNI)

HSP 1 Score: 171 bits (432), Expect = 4.820e-52
Identity = 89/131 (67.94%), Postives = 108/131 (82.44%), Query Frame = 0
Query:   20 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 150
            K K   G RG+ KG GS T+S +AGL FPV RVAR+LK+ + + R+G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGK-KGKGS-TRSAKAGLQFPVGRVARYLKKGRYAQRIGGGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 132          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.100e-51
Identity = 87/125 (69.60%), Postives = 101/125 (80.80%), Query Frame = 0
Query:   25 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEG 149
            KG RG  +G    +QS +AGL FPV+R+ R+LKQ + + RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RI PRHIQLA+RNDEELN+LL +VTIA GGVLPNIH+VLLPKKTA K   G
Sbjct:    6 KGGRG-AEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKAAAG 129          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: UPI001425979E (late histone H2A.2.2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425979E)

HSP 1 Score: 169 bits (428), Expect = 1.620e-51
Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 0
Query:   25 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATK 145
            +G   + K   SV++S +AGL FPV R+AR+L++ K S R+G G++VY+AA++EYL AEILELAGNA RDNKK RI PRHIQLAIRNDEELN+LL DVTIA+GGVLPNI SVLLPKKTATK
Sbjct:    4 RGKGAKAKSVKSVSRSQKAGLQFPVGRIARYLRKGKFSQRIGSGASVYMAAILEYLSAEILELAGNAARDNKKSRIVPRHIQLAIRNDEELNRLLSDVTIAQGGVLPNIQSVLLPKKTATK 124          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A0W8DCQ0_PHYNI (Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DCQ0_PHYNI)

HSP 1 Score: 169 bits (427), Expect = 2.860e-51
Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 0
Query:   20 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 150
            K K   G RG+  G  S T+S +AGL FPV RVAR+L++ + + R G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGKKTGKSS-TRSAKAGLQFPVGRVARYLRKGRYAQRTGSGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 133          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: H3GAL3_PHYRM (Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3GAL3_PHYRM)

HSP 1 Score: 168 bits (426), Expect = 4.060e-51
Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 0
Query:   20 KAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 150
            K K   G RG+  G  S T+S +AGL FPV RVAR+L++ + + R G G+ VY+AAV+EYLCAEILELAGNA RD+KK RI PRHIQ+A+RNDEELNKLL DVTIA GGV+PNIHSVLLPKK+A+  ++GK
Sbjct:    4 KGKAATGGRGKKTGKSS-TRSSKAGLQFPVGRVARYLRKGRYAQRTGSGAPVYMAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASAGKKGK 133          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: H2A_PLAFA (Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 RepID=H2A_PLAFA)

HSP 1 Score: 167 bits (424), Expect = 6.360e-51
Identity = 84/121 (69.42%), Postives = 95/121 (78.51%), Query Frame = 0
Query:   25 KGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATK 145
            KG  GR K S   + S +AGL FPV R+ R+LK+ K + RVG G+ VYLAAV+EYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNK L  VT A GGVLPNIH+VLLPKK+  K
Sbjct:    4 KGKTGRKKASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPKKSQLK 124          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: A0A5J4Y0U0_9CHLO (Histone H2A n=3 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0U0_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 7.470e-51
Identity = 83/121 (68.60%), Postives = 99/121 (81.82%), Query Frame = 0
Query:   28 RGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEE 148
            +G+  G   V++S +AGL FPV R+AR+LK+ K ++R+G G+ VYLAAV+EYL AE+LELAGNA RDNKK RI PRHIQLA+RNDEEL+KLL  VTIA GGVLPNIHSVLLPKKT  K EE
Sbjct:    6 KGKTAGKKQVSRSSKAGLQFPVGRIARYLKKGKFATRIGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGGVTIAAGGVLPNIHSVLLPKKTGKKAEE 126          
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Match: UPI001CB89F2A (histone H2AX n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB89F2A)

HSP 1 Score: 168 bits (425), Expect = 7.910e-51
Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = 0
Query:   10 APRPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVSRVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK 150
            AP+    A  +    KG RG+ K + SV++S +AGL FPV R+AR LK  K + RVG G+ VYLAAV+EYL AE+LELAGNA RDNKK RI PRHIQLA+RNDEEL+KLL  VTIA GGVLPNIHS LLPKK  +  E+G+
Sbjct:    2 APKAAATATAEGDAKKGGRGKAKNTKSVSRSSKAGLQFPVGRIARFLKAGKYAQRVGGGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKGGSGKEKGE 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ8_ECTSI1.210e-7482.99Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S2CIK1_9STRA3.090e-5271.65Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
A0A0W8DCN3_PHYNI4.820e-5267.94Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=... [more]
A0A835ZBB6_9STRA1.100e-5169.60Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
UPI001425979E1.620e-5169.42late histone H2A.2.2-like n=1 Tax=Anneissia japoni... [more]
A0A0W8DCQ0_PHYNI2.860e-5165.65Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 Re... [more]
H3GAL3_PHYRM4.060e-5165.65Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3G... [more]
H2A_PLAFA6.360e-5169.42Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 Re... [more]
A0A5J4Y0U0_9CHLO7.470e-5168.60Histone H2A n=3 Tax=Trebouxia sp. A1-2 TaxID=26089... [more]
UPI001CB89F2A7.910e-5162.41histone H2AX n=1 Tax=Erigeron canadensis TaxID=729... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 121..139
score: 73.03
coord: 79..92
score: 80.54
coord: 64..79
score: 70.89
coord: 35..57
score: 53.25
coord: 93..107
score: 76.19
IPR002119Histone H2ASMARTSM00414h2a4coord: 24..144
e-value: 4.7E-69
score: 245.4
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 23..147
IPR002119Histone H2ACDDcd00074H2Acoord: 29..141
e-value: 2.25221E-60
score: 180.224
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 22..148
e-value: 8.2E-57
score: 192.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 29..145
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 29..110
e-value: 5.2E-16
score: 59.2
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 113..145
e-value: 9.1E-19
score: 66.9
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 27..145
e-value: 1.6E-47
score: 160.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR23430:SF207HISTONE H2Acoord: 23..147
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 43..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:385293..391693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.117.1mRNA_P-littoralis_Contig75.117.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 385229..393199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.117.1 ID=prot_P-littoralis_Contig75.117.1|Name=mRNA_P-littoralis_Contig75.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp
MSGNPSTSSAPRPFQKAPVKAKGLKGSRGRVKGSGSVTQSLRAGLTFPVS
RVARHLKQAKLSSRVGKGSAVYLAAVMEYLCAEILELAGNACRDNKKKRI
TPRHIQLAIRNDEELNKLLCDVTIAEGGVLPNIHSVLLPKKTATKLEEGK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS