mRNA_P-littoralis_Contig75.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI) HSP 1 Score: 502 bits (1292), Expect = 9.480e-173 Identity = 251/327 (76.76%), Postives = 280/327 (85.63%), Query Frame = 2
Query: 209 MGIREFWLLTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATA-AXXXXXXXKTTECPVELVKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAGGLTVGVEGGGGGSGAPVAPSSGESLKPKSKARKKAD 1186
M REFWLLTS+ LVALRRALTV WIR+NKFL PDW+IRPV+DFRHKVVLIGDGFAEG+GDWVVMGG AGVTR+LEK+AGSDEKVRT W IINRGRAGS+S+DWLPSD KSLYH+ ++S AC+DAEIF+VALGTMDVV +CVGMPV+AMRKTALD FEE E+CDT+KN+REICDAL+A+GKKV+VCNVMTSGAGINRR GTAKR+NRQLALY KATA A PVE+VKMNNPRAAREDGRAFDGLHLNARGYRAFA AVY+ +GPMMVAVEWKVWK+KLA GLT G GA VAP SGE +PKSK+ KKAD
Sbjct: 1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGA------GGAAVAPISGEGFEPKSKSNKKAD 321
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.710e-38 Identity = 90/283 (31.80%), Postives = 147/283 (51.94%), Query Frame = 2
Query: 233 LTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
L + VA+R A W+R ++LT P L+ ++++HK+V+IGDGFA G GDW+ M G+++ L ++ ++K+R WQ+INRG + S+ W P+ + +DA+I +V +G++D + RK + E+ T+ N++ ICDAL+ GK+V V ++ A + T + N+ L Y ++T K + PV+L ++ P R D +AFDG H NA+ Y+ A L P++ AVEW WK +L G
Sbjct: 4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCEST---------KMDDLPVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQLEG 259
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.560e-37 Identity = 86/277 (31.05%), Postives = 143/277 (51.62%), Query Frame = 2
Query: 251 VALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
VA+R + W+R ++ P L+ +++ HK+V+IGDGFA G GDW+ M G++ + + ++K+R WQ+INRG + S+ W P+ + + + +DA++ +V +G+MD A RKT + D+ TL+N++ ICDAL+ GK+V V ++ S + + +N+ L + +TA T PV++ ++ P R D +AFDG H NA+ Y+ A L P++ AVEW WK +L G
Sbjct: 6 VAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTP--SISPDQ---TLRNIQAICDALRKKGKRVCVGSLCHSD--VVTECDGHRSINQALVDFCASTA---------TDAFPVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQLDG 255
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.440e-36 Identity = 90/281 (32.03%), Postives = 137/281 (48.75%), Query Frame = 2
Query: 242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDE-KVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
+ VA+R W+R+ ++ P LI P ++FRHK+V+IGDGFA G GDWV M G+ R + + +E KVR WQ+INRG + S+ W P+ + +DA+I +V +G+MD + R + + T+ N++ ICDAL+ GK+V + + S A N+QL Y T+ + PV++ ++ P R D +AFDG H N++ Y+ A L PM+ AVEW WK +L G
Sbjct: 7 YIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEYCNETSGD---------DLPVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQLDG 259
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.360e-35 Identity = 85/283 (30.04%), Postives = 134/283 (47.35%), Query Frame = 2
Query: 242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIV---CNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
+ V +R W+R +++ P L+ ++F HK+V+IGDGFA G GDWV M G+ + + K+ ++ K+R W++INRG S SADW P+ + + + +DAE+ +V +G++D+ + +TLKN++ ICDAL GK+V V C++ A RL + A E P+++ ++ P R D +AFDG H N++ Y+ A L P + AVEW WK KL G
Sbjct: 8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDI-----------------RRYPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENK--------AILDLCTDTSADELPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKLDG 259
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV) HSP 1 Score: 138 bits (347), Expect = 3.060e-33 Identity = 87/281 (30.96%), Postives = 133/281 (47.33%), Query Frame = 2
Query: 242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGA-GINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
+ V +R W+R+ +++ P I P S++RHK+V+IGDGFA G GD++ G+ + L + K+R WQ+INRG + S+ W P + + +DA+I +V +G+MD A R + E E+ TL+N++ ICDAL GK+V V + S IN + +L R + + E PV + P R + +AFDG+H N+ GY+ A D + P+ AVEW WK KL G
Sbjct: 7 YLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCV------------DTQHDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKLDG 258
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI) HSP 1 Score: 135 bits (341), Expect = 2.120e-32 Identity = 95/284 (33.45%), Postives = 137/284 (48.24%), Query Frame = 2
Query: 248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAG-VTRVLEKQAGSDEK----VRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
LVALR L + W + FL + ++P S F HKVV+IGD FA G+GD++ +GG G + + L+K D+K VR W IIN G GS +ADWL S K + S+ DA I I+ LG+ ++ R + E +N+ EICD L+ GK+V + V++ + + LN L + K+T+ T E PV L +++ RE +D H N++ YR A D L PMM AVEW WK +L+
Sbjct: 2 LVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEI------------RNSGTAEHE------IKRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTS---------TEEAPVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLS 258
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.980e-32 Identity = 93/280 (33.21%), Postives = 133/280 (47.50%), Query Frame = 2
Query: 248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAG-VTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
L LR L + W + FL + + P S F HKVV+IGD FA G+GD++ +G G + L+K D+KVR W IIN G GS +ADWL S K + S A D I I+ LG+ ++ R ++ D E ++ EICD L+ GK+V + V + + + LN L + K+T+ T E PV L +++ RE ++D H N++ YR A D L PMM AVEW WKA+L+
Sbjct: 2 LATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGSAEI------------RNSSSDGHEMKH------HLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTS---------TEEAPVILGPRLDTYAFRRESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQLS 254
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A3F2S1E0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1E0_9STRA) HSP 1 Score: 132 bits (332), Expect = 4.930e-31 Identity = 97/291 (33.33%), Postives = 137/291 (47.08%), Query Frame = 2
Query: 248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSL-----------YHKN-LRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
L+ LR LT+ W + F+ + I+P S F HKVV+IGD FA G+GD++ MG GV L+ ++KVR W IIN G GS +ADW+ S K + Y KN L S + DA I I+ LG+ A +R A E +N+ EICD L+ GK V + V + + + LN L + K+T+ T E PV +++N RE+ ++D H N++ YR A D L PMM A EW WK +L+
Sbjct: 7 LLPLRLFLTLVWWHICHFIAHALHVKGIKPSSQFFHKVVVIGDDFAAGIGDYITMGSAGGVAEYLKSIVAYNDKVRHNWAIINAGVPGSTTADWMMSSPKQVNTALVNISSLTYFKNALTSRSMGDASIVIIILGS------------AELRNPAAAGHE------MKRNLMEICDTLRKKGKHVCLATVASPDPLASETDCASSTLNTALEQFCKSTS---------TEEAPVIFGPRLDNYAFRRENALSYDKYHFNSQSYRLLARNTADFLVPMMTAEEWATWKEQLS 270
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN) HSP 1 Score: 131 bits (330), Expect = 1.170e-30 Identity = 91/294 (30.95%), Postives = 144/294 (48.98%), Query Frame = 2
Query: 233 LTSFFLVALRRALTVAWIRMNKFLTSP--DWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKT-------ALDNFEEDEMCDT---LKNVREICDALKADGKKVIVCNVMT-SGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKL 1072
+ S + ++R LT+ W+++ +++ D ++P F HK+V+IGD FA G+GD++V+GG AG+ + L +KVR W ++NRG GS + DWL + L S A +DAE+ IV LG+ + CV + + + ++ +D C KN+ ICD L+ GK V + + + S G + + LN L + +T K + PV L +++ RE AFD HL + GY+ A D L P+M VEWK WK +L
Sbjct: 1 MASAXVTSIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTKYMDDILSSKATRDAEVVIVVLGSQEY--RCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHKNLVAICDTLRKKGKHVCLATIASPSPLGQDEKIP----LNAMLEEFCAST---------KGDDTPVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.77.1 >prot_P-littoralis_Contig75.77.1 ID=prot_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp MGIREFWLLTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVback to top mRNA from alignment at P-littoralis_Contig75:286210..290606- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.77.1 ID=mRNA_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4397bp|location=Sequence derived from alignment at P-littoralis_Contig75:286210..290606- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:286210..290606- >mRNA_P-littoralis_Contig75.77.1 ID=mRNA_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig75:286210..290606- (Pylaiella littoralis U1_48)back to top |