mRNA_P-littoralis_Contig75.69.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5K5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M0_9PHAE) HSP 1 Score: 272 bits (695), Expect = 2.480e-90 Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 2
Query: 182 MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAH-SKAGGRGA 610
MSAAGSASQGTKRKNFN LEREEV+RHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNL+KLGLKAH S +GGRGA
Sbjct: 1 MSAAGSASQGTKRKNFNALEREEVIRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLEKLGLKAHYSASGGRGA 144
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5KRW0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW0_9PHAE) HSP 1 Score: 206 bits (523), Expect = 2.210e-63 Identity = 102/136 (75.00%), Postives = 118/136 (86.76%), Query Frame = 2
Query: 182 MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHS 589
MSAAGSASQG KRKNFNV EREEV+R+LLA+SEDGV +HG+Y AAEKYGC W+TIK +W KHE+RE +GDPS YIGN+RKG+SG KGID+E+LR RL +IPLNERTTQRRLAAALGIP+ TL NL LGL+AHS
Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLRAHS 136
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5KLV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV4_9PHAE) HSP 1 Score: 201 bits (511), Expect = 6.050e-60 Identity = 100/134 (74.63%), Postives = 116/134 (86.57%), Query Frame = 2
Query: 182 MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKA 583
MSAAGSASQG KRKNFNV EREEV+R+LLA+SEDGV +HG+Y AAEKYGC W+TIK +W KHE+RE +GDPS YIGN+RKG+SG KGID+E+LR RL +IPLNERTTQRRLAAALGIP+ TL NL LGL+A
Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLRA 134
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5L9I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I0_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.260e-49 Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 2
Query: 182 MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
MSAAGSASQ KRKNFN E+EEV+RHLL S++GVL +GA++ AAEK+GC W+T K +W +++ + AG S + N R GNSGRKG+ +E+LR RLRDIPLN+RTTQRRLAAAL IP TL +NL LGL+AHS A
Sbjct: 1 MSAAGSASQVAKRKNFNNSEKEEVIRHLLTGSKNGVLPYGAFKAAAEKFGCHWETNKRLWRRYDTQHKAGVSSPQLANRRNGNSGRKGVPIEELRERLRDIPLNDRTTQRRLAAALEIPLTTLHKNLKALGLRAHSNA 138
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5KHK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK2_9PHAE) HSP 1 Score: 167 bits (422), Expect = 5.180e-49 Identity = 88/138 (63.77%), Postives = 107/138 (77.54%), Query Frame = 2
Query: 182 MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
M AAGSASQ KRKNFN E EEV+R+LL S++GVLR+GA++EA EK+G W+TIK +W +++ + AG S I N RKGNSGR+GI LE+L+ R RDIPLNERTTQRRLAAAL IP+ TL RNL LGL+AHS A
Sbjct: 1 MPAAGSASQVAKRKNFNEEETEEVIRYLLPGSKNGVLRYGAFKEAGEKFGWYWETIKRLWMRYDTQHKAGVASPQIDNRRKGNSGRQGIPLEELKERPRDIPLNERTTQRRLAAALVIPKSTLHRNLKALGLRAHSNA 138
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5KBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK8_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.990e-23 Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 2
Query: 347 IKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
K +W ++E + AG IGN RKGNSGRKGI +++LR RLRDIPLN+RTTQRRLAAALGI TLF NL LGL+AHSKA
Sbjct: 17 FKRLWVRYEAQRKAGVARPKIGNLRKGNSGRKGIPIQELRERLRDIPLNDRTTQRRLAAALGIATTTLFDNLKALGLRAHSKA 99
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5JEL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL2_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 4.560e-21 Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 2
Query: 365 KHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
+++ + AG S I N RKGNSGRKGI LE+L+ RLRDIPLN+RTTQRRLAAALGIP+ TL RNL LGL+AHS A
Sbjct: 2 RYDTQHKAGVASPQIENRRKGNSGRKGIPLEELKERLRDIPLNDRTTQRRLAAALGIPKSTLHRNLKVLGLRAHSNA 78
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6H5JAZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ0_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.590e-18 Identity = 51/77 (66.23%), Postives = 57/77 (74.03%), Query Frame = 2
Query: 365 KHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
++ + AG S I N R GNSGRKGI LE+LR RLRDIPLN RTTQRRLAAALGIP+ TL RN LGL+AHS A
Sbjct: 2 RYYTQHKAGVASPKIENRRMGNSGRKGIPLEELRERLRDIPLN-RTTQRRLAAALGIPKSTLHRNPKALGLRAHSNA 77
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A6A4ZZT7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZZT7_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.810e-12 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 2
Query: 221 KNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGR-KGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHS 589
K+ N ER + LLA S++GVLR+GA+ A+ +GCSW+TI +WA G +A KGNSG + E++ ++ + ++R T R L IP+ TL ++ + LKA S
Sbjct: 24 KHLNDAERRQAYEMLLAGSDNGVLRYGAFAFTAQHFGCSWRTISRLWASARLSIRDGSLTAVTSTKIKGNSGTTRKRSKEEIELAIKSVAQHDRQTLRSLEVHSSIPKTTLINHMKESKLKAKS 147
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Match: A0A485KPF4_9STRA (Aste57867_10038 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPF4_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.250e-10 Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 2
Query: 218 RKNFNVLEREEVLRHLLANSEDGVLRH---GAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRK-GIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLDKLGLKAHSKA 595
R++ ERE ++R +L S + G Q A+KY C T++ V A AGD + IGN +KG GRK E ++ +L ++PL+ERTT R ++ GIP +L R L + +AHS +
Sbjct: 3 RRDLTNEEREAIIREVLLKSNGSYMTRLPKGFGQSLADKYLCGVSTVRKVIALARHSFDAGDMTVCIGNKKKGKVGRKMSYTKEQIKNKLLEVPLSERTTLRSISEKTGIPLGSLHRYLKQGLFRAHSSS 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.69.1 >prot_P-littoralis_Contig75.69.1 ID=prot_P-littoralis_Contig75.69.1|Name=mRNA_P-littoralis_Contig75.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp MSAAGSASQGTKRKNFNVLEREEVLRHLLANSEDGVLRHGAYQEAAEKYGback to top mRNA from alignment at P-littoralis_Contig75:265461..266175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.69.1 ID=mRNA_P-littoralis_Contig75.69.1|Name=mRNA_P-littoralis_Contig75.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=715bp|location=Sequence derived from alignment at P-littoralis_Contig75:265461..266175+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:265461..266175+ >mRNA_P-littoralis_Contig75.69.1 ID=mRNA_P-littoralis_Contig75.69.1|Name=mRNA_P-littoralis_Contig75.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=534bp|location=Sequence derived from alignment at P-littoralis_Contig75:265461..266175+ (Pylaiella littoralis U1_48)back to top |