mRNA_P-littoralis_Contig75.33.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.150e-43 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 1
Query: 181 DDAFENMKSKSRRLLG-EPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSIC 447
DDAFE+MK+ S RLLG EPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLA+GF LTFGSLFRVAQLLTGNPRPFVLYFSLGS L+IC
Sbjct: 2 DDAFESMKASSMRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNIC 91
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.050e-22 Identity = 47/89 (52.81%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 187 AFENMKSKSRRLLGEPEE--KSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSIC 447
A+E+++ +RRLLG+ E K+ +E+EE VCS CPSL+++ RLIG+G CL +GF+LTFG+LFR+ +L+ GNP PFV+ +S+G+++SIC
Sbjct: 21 AYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISIC 109
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN) HSP 1 Score: 85.1 bits (209), Expect = 1.270e-15 Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 199 MKSKSRRLLGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSIC 447
M S L GEP ++ +++EE C CP LSW+ RLIG+ C A+G ++ GS R+ +L+ GNP+PF + +SLG++++IC
Sbjct: 1 MASTRSLLTGEPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAIC 83
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.190e-12 Identity = 31/74 (41.89%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 223 LGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSI 444
L E + K+ +E E+A+CS+CP L+++ R+ GY AC + F L+ GS R+ +L+ GNP PFV++++LG++++I
Sbjct: 10 LAEEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAI 83
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A2D4BV73_PYTIN (Vesicle transport protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV73_PYTIN) HSP 1 Score: 72.8 bits (177), Expect = 2.510e-11 Identity = 31/61 (50.82%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 262 EEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSI 444
+E V S+CPSLS+ R+IG+ C +GF+L+FGS FR+A+L+ GNP PF + +++G+LLS+
Sbjct: 24 KEEVNSICPSLSYHERVIGFLTCFLLGFLLSFGSTFRLAKLVHGNPGPFAIAYTIGNLLSL 84
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A7S2IBZ2_9STRA (Vesicle transport protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBZ2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.650e-10 Identity = 32/71 (45.07%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 235 EEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSIC 447
EEKS ++EE VC + P+L+ + R+IG +C+ G++L+FGS FR+A LL G P PFV+ +LG+++++C
Sbjct: 49 EEKSWQDQIEEEVCELFPALTLQQRVIGCISCMVFGYLLSFGSFFRLAGLLKGKPVPFVVAATLGNIIALC 119
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A8J5XM49_DIALT (Vesicle transport protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM49_DIALT) HSP 1 Score: 66.6 bits (161), Expect = 4.650e-9 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 235 EEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSICKKNVLPSESR 477
+EKS LQ+++E S+CPSL++ R+ G+G C+ G +L+ S+F +L+ G PR F + ++ G++L+IC L R
Sbjct: 43 QEKSELQQIQE---SMCPSLTYEQRMYGFGICICAGILLSLSSMFSFTKLVLGQPRDFAIKYTFGNVLAICSTGFLIGPGR 120
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A8J2SX58_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX58_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.820e-9 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 283 CPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSI------------CKKNVLPS 468
CP LS+ RL GY C++IGF+LT GSL R+ +LL G P+ FV+YF+ G+L +I CKK + P+
Sbjct: 25 CPKLSYNQRLTGYVLCMSIGFILTMGSLVRLKELLHGEPKNFVIYFTFGNLCAIASCFFLSGPKSHCKKMIDPT 98
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A7S0AI95_9STRA (Vesicle transport protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AI95_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.150e-9 Identity = 26/76 (34.21%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 220 LLGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSIC 447
L G P+ + +E+ + P+++W+ R+IG AC+A+G+ L+ G FR+ + + GNP PFV+ ++G+++S+C
Sbjct: 29 LPGRPQPQREKSRLEQVSDNYLPAMTWKQRVIGCLACMAVGYTLSLGGFFRLTEAMMGNPGPFVINSTIGNVISLC 104
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Match: A0A662WFW4_9STRA (Vesicle transport protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WFW4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.320e-9 Identity = 28/60 (46.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 265 EAVCSVCPSLSWRNRLIGYGACLAIGFMLTFGSLFRVAQLLTGNPRPFVLYFSLGSLLSI 444
E + ++CPSLS++ R+IG C +GF+L+ GS FR+A+L+ GNP PF + +++G++LSI
Sbjct: 32 EGLNTLCPSLSYQERVIGCVTCFMLGFLLSLGSTFRLAKLVHGNPAPFAIAYTIGNVLSI 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.33.1 >prot_P-littoralis_Contig75.33.1 ID=prot_P-littoralis_Contig75.33.1|Name=mRNA_P-littoralis_Contig75.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp MNFDDAFENMKSKSRRLLGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYback to top mRNA from alignment at P-littoralis_Contig75:109818..113518- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.33.1 ID=mRNA_P-littoralis_Contig75.33.1|Name=mRNA_P-littoralis_Contig75.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3701bp|location=Sequence derived from alignment at P-littoralis_Contig75:109818..113518- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:109818..113518- >mRNA_P-littoralis_Contig75.33.1 ID=mRNA_P-littoralis_Contig75.33.1|Name=mRNA_P-littoralis_Contig75.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=603bp|location=Sequence derived from alignment at P-littoralis_Contig75:109818..113518- (Pylaiella littoralis U1_48)back to top |