mRNA_P-littoralis_Contig749.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig749.16.1
Unique NamemRNA_P-littoralis_Contig749.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 9.470e-138
Identity = 186/246 (75.61%), Postives = 209/246 (84.96%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFR-FKTGILFNSREKMDNAWFTACTIHNM 735
            +VLGVLQVLGRGNC ADVA FSLMS++TAE+SFHRFC CFA GLW  W+RL EG+ L++VES Y   G+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAEND TVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIE  FGRLKGRFR FKTGILF  R K+D+AWFTAC IHNM
Sbjct:  210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 455          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 3.860e-136
Identity = 181/246 (73.58%), Postives = 209/246 (84.96%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFR-FKTGILFNSREKMDNAWFTACTIHNM 735
            +VLGVLQVLGRGNC ADVA+ SLMS+ TAEKSFHRFCDCF+ GLWHQWV L EG+ LK+V   Y   G PGAV S DCTH++W  C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAEND TVVKRDLSV R++ EEPWASYK+ ++ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS  QQEWSKRFES+RKDIE  FGRLKGRFR FKTGILF +REK+DNAWFTAC IHNM
Sbjct:  112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNM 357          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.330e-126
Identity = 166/223 (74.44%), Postives = 189/223 (84.75%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFR-FKTGILFNSREKMDNAWFTACTIHNM 735
            MS++TAE+SFHRFC CFA GLW  W+RL EG+DL++VES Y   G+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAEND TVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIE  FGRLKGRFR FKTGILF  R K+D+AWFTAC IHNM
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 223          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 5.270e-125
Identity = 173/246 (70.33%), Postives = 193/246 (78.46%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFR-FKTGILFNSREKMDNAWFTACTIHNM 735
            QVLGVLQ LGRGNC ADVA FSLMS++TAE+SFHRFC CFA GLW  W+RL EG+DL++VES Y   G+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAEND TVV                 YKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+E  FGRLKGRFR FKTGILF  R K+D+A FTAC IH M
Sbjct:    5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTM 234          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 7.780e-96
Identity = 126/223 (56.50%), Postives = 169/223 (75.78%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFR-FKTGILFNSREKMDNAWFTACTIHNM 735
            MS +TAEKSFH FC+ F+  LW  WV+L  GD+LK+VE ++ + G+PGA+ S DCTH  W     SE  ++ GKEGY +VV EA CDH GRIIA+TK YPG+END T+++RD S+ RI+ EEPW+S KY++Y  DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIE  +GR+KGRFR FK GIL+ +R+ +DN WFTAC +HNM
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNM 223          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.470e-89
Identity = 123/184 (66.85%), Postives = 147/184 (79.89%), Query Frame = 1
Query:    4 VLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 555
            VLGVLQVLGRGNC ADVA+ SLMS+ TAEKSFHRFCDCF+ GLWHQWV L EG+ LK+V   Y     PG V S DCTH++   C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAEND TVVKRDLSV R++ EEPWA YK+ ++ L+G ++ HTGGWLIVDGGYHRV  +   Y
Sbjct:  101 VLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.710e-79
Identity = 120/210 (57.14%), Postives = 150/210 (71.43%), Query Frame = 1
Query:  109 CDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFRFKTG-ILFNSREKMDNAWFTACTIHNM 735
            C+ F+ GLW  WV+L  GD+LK+VE IY + G+PGA GS DCTH  W  C +SE N H GKEGYTS+V E  CDH+GRIIA+TK  PGAEND TV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIE  FGR+KGR+R   G ILF++R+K DNA FTAC +HNM
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNM 286          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.170e-71
Identity = 123/272 (45.22%), Postives = 156/272 (57.35%), Query Frame = 1
Query:    7 LGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHR----------------------------VPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFRFKTG-ILFNSREKMDNAWFTACTIHNM 735
            +G L+VL  G C  DVA FSLMS++TAE SFH FC+ F+ GLW  WV+L  GD+ K+                                N H GKEGYTS+V E  CDH+GRIIA+TK YPGAEND TV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY +                            +PLLI P KT+ +VE+ +WS+R ES+RKDIE  FGR+KGR+R   G +LF++R+K+DNAWFTAC +HNM
Sbjct:    1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNM 227          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 8.170e-71
Identity = 120/236 (50.85%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRL--REGDDLKQVESIYNQWG--------FPGAVGSADCTHVAWERCAY---SETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFRFKTG-ILFNSREKMDNAWFTACTIHNM 735
            MS++TAE SFH FC+ F+ GLW  W     +EG     VE  +   G        +PGA    D T +A ++  +    E     GKEGYTS+V E  CDH+GRIIA+TK YPGAEND TV+ R   + RI+ EEPW SYK+++Y  DGT +  TG W+IVDGGY ++PLLI P KT+ +VE+  WS+R ES+RKDIE  FGR+KG +R   G ILF++R K+DNAWFTAC +HNM
Sbjct:    1 MSRTTAETSFHHFCEKFSEGLWDTWNTHTGKEGYTSLVVECTWGHSGRIIAATKTYPGAEN--DKTVIARDKFIWRIRDEEPWKXGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNM 234          
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 9.640e-70
Identity = 111/246 (45.12%), Postives = 154/246 (62.60%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASYKYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIEYFFGRLKGRFRF-KTGILFNSREKMDNAWFTACTIHNM 735
            QVL  LQ+L RGN  AD+   S +S  T   +FHRFC  FA  L+ ++V L  G+DL++V   Y++ GFPGAVGS D TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA ND T+++ D +V RI+ +  +   KY++Y  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+E +FG LKGRFR  K  I F+ +E +DN +FT C +HNM
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig749.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE9.470e-13875.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE3.860e-13673.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE1.330e-12674.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE5.270e-12570.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE7.780e-9656.50Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE1.470e-8966.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K7N8_9PHAE1.710e-7957.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL5_9PHAE5.170e-7145.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JU81_9PHAE8.170e-7150.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE9.640e-7045.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig749contigP-littoralis_Contig749:106244..107794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size735
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.74e-51
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size735
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791544.0836565-CDS-P-littoralis_Contig749:106243..1067741680791544.0836565-CDS-P-littoralis_Contig749:106243..106774Pylaiella littoralis U1_48CDSP-littoralis_Contig749 106244..106774 +
1680791544.1018128-CDS-P-littoralis_Contig749:107590..1077941680791544.1018128-CDS-P-littoralis_Contig749:107590..107794Pylaiella littoralis U1_48CDSP-littoralis_Contig749 107591..107794 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig749.16.1prot_P-littoralis_Contig749.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig749 106244..107794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig749.16.1

>prot_P-littoralis_Contig749.16.1 ID=prot_P-littoralis_Contig749.16.1|Name=mRNA_P-littoralis_Contig749.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=245bp
QVLGVLQVLGRGNCLADVAKFSLMSQSTAEKSFHRFCDCFAGGLWHQWVR
LREGDDLKQVESIYNQWGFPGAVGSADCTHVAWERCAYSETNIHKGKEGY
TSVVFEAICDHAGRIIASTKGYPGAENDNTVVKRDLSVNRIQHEEPWASY
KYEVYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRF
ESVRKDIEYFFGRLKGRFRFKTGILFNSREKMDNAWFTACTIHNM
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mRNA from alignment at P-littoralis_Contig749:106244..107794+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig749.16.1 ID=mRNA_P-littoralis_Contig749.16.1|Name=mRNA_P-littoralis_Contig749.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1551bp|location=Sequence derived from alignment at P-littoralis_Contig749:106244..107794+ (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTGGCGGA TGTTGCAAAATTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC ACCGTTTCTGCGACTGCTTCGCGGGGGGCTTGTGGCATCAGTGGGTTCGG CTGCGTGAGGGCGATGACCTCAAGCAAGTGGAGAGCATCTACAACCAGTG GGGTTTTCCGGGGGCCGTAGGGTCAGCCGACTGCACCCACGTGGCGTGGG AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC ACGTCGGTTGTGTTCGAGGCGATTTGTGACCACGCTGGCCGCATCATCGC GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAACACGGTGGTCAAGC GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC AAGTACGAGGTGTACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG GTGGCTGATCGTCGACGGGGGGTACCACCGGGTGAGTAAATTGTATGACG TGAGCGCAATGGTGTCGATGAAACCATGAGCGATTGTGAGGTGTGCAGGT ATAAATAGAAAGGAACCCCCCACGCCCTGCAAAGCACAAGTGTGGTGCCG AAGTGTTGCTGTTGTTTTTCCATGGAATACCCCTCGTGCATGCCTTGAGG GCAATGGTTTCCATTGGGTTGTTGCAGAGAGTTGCAGGTAAGAATAGAGA GTACCCCCCCCCCGCAAAGCATTGAGTCGTACCGAAGTGCTGCTGTTGTC TTTCCAAGAACCCCCTGCCTCCCCGTCGAAGGGGAACCAGCCCGCTGTTT TTTTCTCTAGCACACCTTTTACGCAGACCAGGGAACCACTTGCTCCTGTT CACTTTTGCATCTGATGTCGGATGTAGACCCCGCTGAACTAAGACCAGGT ATCCCATTTGTGGGCGCCCCCCCGACGTGTGTGTTGCCGGACATCAACGA TAATACCACGGGCCCACCACCTCGCATATTGGTCGCTTTTCACCCTCCTG ATCATGCACATTGCATCGCGATCTTGCGGTCTAGCGGCACGTAGCCCCGC CACTCGACAGAAGCATCTGATCAGCATCGATATGAGGTATCCGGTTGCTC TCATAATATCTCCGAGGATTTGTGGCTGCGGCCTACATTTTCTCTCCGGT TTGCAGTCAATCGAGAGTCCCACGTTTTTTTTTATGCATTACTTGTTTCG AGGTTTTAAAACTGAATTTCCGGATCGACGAAACATAGGCCCTTACCACA TTCCTTCTTCCCTTCTTTCGCCCCTGCTCTTATTGGCCGTACACCAGGTG CCCCTTCTCATATGCCCGTATAAAACGTACGCGAGCGTTGAACAGCAGGA GTGGAGCAAGAGATTCGAGTCAGTACGCAAGGACATCGAGTACTTTTTCG GAAGACTCAAGGGGCGGTTCAGGTTCAAGACCGGCATTTTGTTCAACAGT CGGGAGAAGATGGACAACGCCTGGTTCACGGCTTGCACCATTCACAACAT G
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Coding sequence (CDS) from alignment at P-littoralis_Contig749:106244..107794+

>mRNA_P-littoralis_Contig749.16.1 ID=mRNA_P-littoralis_Contig749.16.1|Name=mRNA_P-littoralis_Contig749.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=735bp|location=Sequence derived from alignment at P-littoralis_Contig749:106244..107794+ (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTGGCGGA
TGTTGCAAAATTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC
ACCGTTTCTGCGACTGCTTCGCGGGGGGCTTGTGGCATCAGTGGGTTCGG
CTGCGTGAGGGCGATGACCTCAAGCAAGTGGAGAGCATCTACAACCAGTG
GGGTTTTCCGGGGGCCGTAGGGTCAGCCGACTGCACCCACGTGGCGTGGG
AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC
ACGTCGGTTGTGTTCGAGGCGATTTGTGACCACGCTGGCCGCATCATCGC
GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAACACGGTGGTCAAGC
GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC
AAGTACGAGGTGTACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG
GTGGCTGATCGTCGACGGGGGGTACCACCGGGTGCCCCTTCTCATATGCC
CGTATAAAACGTACGCGAGCGTTGAACAGCAGGAGTGGAGCAAGAGATTC
GAGTCAGTACGCAAGGACATCGAGTACTTTTTCGGAAGACTCAAGGGGCG
GTTCAGGTTCAAGACCGGCATTTTGTTCAACAGTCGGGAGAAGATGGACA
ACGCCTGGTTCACGGCTTGCACCATTCACAACATG
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