mRNA_P-littoralis_Contig748.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig748.14.1
Unique NamemRNA_P-littoralis_Contig748.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 1.660e-158
Identity = 242/349 (69.34%), Postives = 260/349 (74.50%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            A  F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G EGMAWAT+MKLR AL+KRAGE                  DLTSEQL SV A VFEELGNMDQTPVQHE+PVETTLEK GAKDARISTGGKEKERFTL LAVMA+G +V  RIIFKGTPF PPT SGKGKST PRK                              W D REC  WIS SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR  YTA++A AV D ++GKLKPP RG VSTWCKEAW   TP+ VKTCF ICGLTLALDGSEDHA
Sbjct:   24 ALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHA 372          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 3.130e-156
Identity = 239/375 (63.73%), Postives = 267/375 (71.20%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTG--------------------------GKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            A  F++KF +WY+RFRKR  FSIRRRTSVG +LP GHEGMAWATLMKLR ALL+RAGE                  DL+S QLE V   +F++LGNMDQTPVQ+EMPVETTLEK GAKDARI+TG                          GKEKERFTLCLAV A+G++VPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD RE  LWI +SWKLRPNNGS+++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL PPGRG V+TWCK AWA ITP+ VKTCFKICGLTLALDGSEDHA
Sbjct:  111 ALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 485          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 2.880e-155
Identity = 242/378 (64.02%), Postives = 264/378 (69.84%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLV-----------------------------KTCFKICGLTLALDGSEDHA 906
            A  F+ K N+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKLR AL++RAGE                  DLT EQL SV A VF+ELGNMDQTPVQHEMPVETTLEK GAKDARISTGGKEKERFTL LAVMA+G +V  RIIFKGTPFIPP  SGKGKST PRK                              W D REC  WIS SWKLRPNNGSI++QRP ILVLDDFKCH+DE +IA L++ ANTIVI+IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++A AV D ++GKLKPP RG VSTWCKEAW  ITP+ V                             KTCFKICGLTLALDGSEDHA
Sbjct:   24 ALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHA 401          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 4.420e-152
Identity = 238/350 (68.00%), Postives = 260/350 (74.29%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGG-KEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            A +F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKL  AL+KRAGE                  DL SEQL SV A VFEE+GNMDQ PVQHEMPVETTL+K GAKDARISTGG  EKERFTL LAV A+G +V  RIIF+GTPFIPPT SGKGKST+PRK                              W D REC  WIS SWKLRPNNGSI++QRP ILVLDDFKCH DE FIA L++ ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++  AV D ++GKLKPP RG VSTWCKEAW  ITP+ VKTC KICGLTLALDGSEDHA
Sbjct:  218 AIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 1.540e-149
Identity = 232/336 (69.05%), Postives = 254/336 (75.60%), Query Frame = 1
Query:   16 AKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLA 882
            +KF +WY+RF KR  FSIRRRTSVGQKLP GHEGMAWATLMKLR ALL+RAGE                  DL+S QLE V   +FEELGNMDQTPVQHEMPVETTLE  GAKDARI+TGGKEKERFTLCLAV A+G +VPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LWI +SWKLRPNNGSI++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGL PL QPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL PPGRG V+TWCK AWA ITP++VKTCFKICGLTLA
Sbjct:  183 SKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.950e-148
Identity = 236/357 (66.11%), Postives = 254/357 (71.15%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKL--------RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            A  F+ KFN+WY+RFRKR GFSIRRR SVGQKLP G+EGMAWAT+ KLR AL+KRAGE                  DLTSEQ  SV A VFEELGNMDQTPVQHEMPVETTLE  G KDARISTGGKEKERFTL LAVMA+G  V   IIFKGTPFIPPT SGKGKST PRK                              W   +EC  WI  SWKL        RPNNGSI++QRP ILVLDDFKCH+DE FIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++A AV D ++GKLKPP RG VSTWCKEAW  +T + V TCFKICGLTLALDGSEDHA
Sbjct:  178 ALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA 534          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 6.970e-147
Identity = 237/362 (65.47%), Postives = 255/362 (70.44%), Query Frame = 1
Query:    1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG------------------------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            A  F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKLR AL+KRAGE                  DLTSEQL SV A VFEELGNMDQTPVQHEMPVETTLEK GAKDARISTGG+EKERFTL LAVMA+G +V  RIIFKGTPFIPPT SGK KST PRK                                           W D REC  WI  SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ A T VI IPGGLT LLQPLDRMLNKQMKRLLRG YTA +A AV D ++GKL PP  G VSTWCKEAW  IT   V+TCFKICGLTLALDGSE HA
Sbjct:  206 ALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHA 566          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 6.570e-143
Identity = 228/352 (64.77%), Postives = 253/352 (71.88%), Query Frame = 1
Query:    1 AEE---FRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            AEE   FR KF NWY RFR+R G SIRRRTSVGQKLPTG+EG+A+ATLMKLR ALL+RAGE                  DL+  QLESVA  VFEELGNMDQTPVQ EMPVETTLEK GAKDARISTGGKEKERFTLCLAVMA+G +VPLRIIFKG PFIPP+ + +GK+TQPRKG                             W DA ECTLW+SESW  RPN+GS+IKQR SILVLDDF+               NT VILIPGGLTPLLQPLDRML+K+MKRL+R  YT + A A+ DPKTGKL+PPGRG VSTWCKE+WA IT + VK CFK+CGLTLALDGSED A
Sbjct:  194 AEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDA 531          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 4.820e-139
Identity = 214/329 (65.05%), Postives = 235/329 (71.43%), Query Frame = 1
Query:   61 FSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAG------------------EDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            F+IRR TSVGQKLP GHEGMAWATLMKLR ALL+RAG                  EDL+S QLE V   +FEELGNMDQTPVQHE PVE   +    +  R       +ERFTLCLAV A+G +VPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LWI +SWKLRPNNGSI++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL PPGRG V+TWCK AWA ITP+  KTCFKICGLTLALDGSEDHA
Sbjct:  168 FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHA 492          
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 6.860e-139
Identity = 232/394 (58.88%), Postives = 262/394 (66.50%), Query Frame = 1
Query:   10 FRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMY------------------------------------------------TAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 906
            FR KF NWY  FR+R GFSIRRRTSVGQKLPTG+EG+A+ATLMKLR ALL+RAGE                  DLT  QLESVAA VFEELGNMDQTPVQ EMPVETTLEKRG KDARISTGGKEK+RFT CLAVMA+G +VP RIIFKG PFIPP+ +G+ K+TQ RKG                             WCDARECTLW+SESW+ RPN+GS+IKQR SILVLDDF+CHR E+F+ DL+++ NT VILIPGGLTPLLQPLDRMLNK+MKRL+RG                                                  T + A A+ DPKTGKL+PPGRG VST  KE+WA ITP+ VK CFK+CGLTLALDGSED A
Sbjct:   96 FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDA 489          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig748.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.660e-15869.34DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE3.130e-15663.73DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE2.880e-15564.02DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE4.420e-15268.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE1.540e-14969.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.950e-14866.11DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE6.970e-14765.47DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE6.570e-14364.77DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE4.820e-13965.05DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE6.860e-13958.88Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig748contigP-littoralis_Contig748:119333..120599 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size906
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.25e-106
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size906
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791543.5013697-CDS-P-littoralis_Contig748:119332..1195011680791543.5013697-CDS-P-littoralis_Contig748:119332..119501Pylaiella littoralis U1_48CDSP-littoralis_Contig748 119333..119501 +
1680791543.5142844-CDS-P-littoralis_Contig748:119555..1197081680791543.5142844-CDS-P-littoralis_Contig748:119555..119708Pylaiella littoralis U1_48CDSP-littoralis_Contig748 119556..119708 +
1680791543.526284-CDS-P-littoralis_Contig748:119928..1200701680791543.526284-CDS-P-littoralis_Contig748:119928..120070Pylaiella littoralis U1_48CDSP-littoralis_Contig748 119929..120070 +
1680791543.5381775-CDS-P-littoralis_Contig748:120157..1205991680791543.5381775-CDS-P-littoralis_Contig748:120157..120599Pylaiella littoralis U1_48CDSP-littoralis_Contig748 120158..120599 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig748.14.1prot_P-littoralis_Contig748.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig748 119333..120599 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig748.14.1

>prot_P-littoralis_Contig748.14.1 ID=prot_P-littoralis_Contig748.14.1|Name=mRNA_P-littoralis_Contig748.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp
AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRA
ALLKRAGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAK
DARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKST
QPRKGWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAF
IADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAV
TDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSED
HA
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mRNA from alignment at P-littoralis_Contig748:119333..120599+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig748.14.1 ID=mRNA_P-littoralis_Contig748.14.1|Name=mRNA_P-littoralis_Contig748.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1267bp|location=Sequence derived from alignment at P-littoralis_Contig748:119333..120599+ (Pylaiella littoralis U1_48)
GCAGAGGAGTTCCGGGCCAAGTTCAACAACTGGTATCGGCGTTTCCGCAA GCGCCGCGGGTTTAGTATTCGCCGGCGTACCAGCGTGGGTCAGAAGCTGC CCACAGGACACGAGGGCATGGCGTGGGCAACGTTGATGAAGCTGCGGGCT GCTCTCCTGAAGCGCGCTGGTGAGATTTACGAGGAGCGCCACCCGTCCCC ACCTGGCGAGAGCCCCATCAAAGGGGAGGACCTGACTTCCGAGCAGCTGG AGTCGGTGGCCGCGACGGTTTTCGAGGAACTCGGCAACATGGACCAGACG CCTGTCCAGCACGAGATGCCGGTCGAAACGACTCTGGAAAAGCGTGGCGC CAAGGATGCTCGCATCAGCACCGGAGGTACGAGTCTAATCTATAGGTACT TCAACTTTTGTTTTGTGCTGTTGCTTGTCGGGATTTGGTCTCTCTCTAGG TCGACAAGAATTATGATTTTGGTCTACGCTGCTTTACTGTTTGTTCGCTG TTTTGGGTCGGCAGTTGGTCTCTGTCATAATATAAAACAACAGATGAACT GAAAAACTTTTCTCCCCTCGTCTACTTTGTACTGGTTCCCCCGCAGGCAA GGAGAAGGAACGCTTCACGCTCTGTCTTGCTGTCATGGCGAACGGCAGCA GGGTTCCACTACGGATTATCTTCAAGGGCACGCCGTTCATCCCTCCGACC AAGTCAGGGAAGGGCAAGAGCACTCAGCCGCGGAAGGGGTCGATCGCGGC AGAGATTGTCCCCGGGAACCGTACCAAGCACGGGCACCCCGCCGGCGGCA TGTCGTTTGGAGTGCAGGAGAAGAGCTGGTGCGACGCGCGGGAGTGCACC CTGTGGATCTCGGAGAGCTGGAAGCTGCGCCCCAACAACGGAAGCATAAT CAAGCAGCGCCCAAGCATCTTGGTGTTGGACGACTTCAAGTGCCACCGGG ACGAGGCTTTCATCGCCGACCTCCAGAAGAAAGCTAACACCATCGTCATC CTCATCCCGGGCGGTTTGACGCCGCTGCTACAGCCGCTGGACCGCATGCT CAACAAGCAGATGAAGCGGCTGCTGCGGGGGATGTACACCGCCCACACCG CCAAGGCAGTCACCGACCCCAAGACGGGGAAGCTGAAGCCGCCGGGACGT GGGCAGGTGTCGACGTGGTGCAAGGAGGCGTGGGCGCAGATCACTCCTGA CCTGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGCTTGCTCTTGATG GCAGCGAGGACCATGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig748:119333..120599+

>mRNA_P-littoralis_Contig748.14.1 ID=mRNA_P-littoralis_Contig748.14.1|Name=mRNA_P-littoralis_Contig748.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig748:119333..120599+ (Pylaiella littoralis U1_48)
GCAGAGGAGTTCCGGGCCAAGTTCAACAACTGGTATCGGCGTTTCCGCAA
GCGCCGCGGGTTTAGTATTCGCCGGCGTACCAGCGTGGGTCAGAAGCTGC
CCACAGGACACGAGGGCATGGCGTGGGCAACGTTGATGAAGCTGCGGGCT
GCTCTCCTGAAGCGCGCTGGGGAGGACCTGACTTCCGAGCAGCTGGAGTC
GGTGGCCGCGACGGTTTTCGAGGAACTCGGCAACATGGACCAGACGCCTG
TCCAGCACGAGATGCCGGTCGAAACGACTCTGGAAAAGCGTGGCGCCAAG
GATGCTCGCATCAGCACCGGAGGCAAGGAGAAGGAACGCTTCACGCTCTG
TCTTGCTGTCATGGCGAACGGCAGCAGGGTTCCACTACGGATTATCTTCA
AGGGCACGCCGTTCATCCCTCCGACCAAGTCAGGGAAGGGCAAGAGCACT
CAGCCGCGGAAGGGCTGGTGCGACGCGCGGGAGTGCACCCTGTGGATCTC
GGAGAGCTGGAAGCTGCGCCCCAACAACGGAAGCATAATCAAGCAGCGCC
CAAGCATCTTGGTGTTGGACGACTTCAAGTGCCACCGGGACGAGGCTTTC
ATCGCCGACCTCCAGAAGAAAGCTAACACCATCGTCATCCTCATCCCGGG
CGGTTTGACGCCGCTGCTACAGCCGCTGGACCGCATGCTCAACAAGCAGA
TGAAGCGGCTGCTGCGGGGGATGTACACCGCCCACACCGCCAAGGCAGTC
ACCGACCCCAAGACGGGGAAGCTGAAGCCGCCGGGACGTGGGCAGGTGTC
GACGTGGTGCAAGGAGGCGTGGGCGCAGATCACTCCTGACCTGGTCAAGA
CTTGCTTCAAGATCTGCGGGCTCACGCTTGCTCTTGATGGCAGCGAGGAC
CATGCG
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