|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 1266 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1236 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791541.4363-CDS-P-littoralis_Contig746:50578..51600 | 1680791541.4363-CDS-P-littoralis_Contig746:50578..51600 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig746 50579..51600 - |
| 1680791541.4487884-CDS-P-littoralis_Contig746:52231..52445 | 1680791541.4487884-CDS-P-littoralis_Contig746:52231..52445 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig746 52232..52445 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791541.473786-UTR-P-littoralis_Contig746:52445..52474 | 1680791541.473786-UTR-P-littoralis_Contig746:52445..52474 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig746 52446..52474 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig746.14.2 >prot_P-littoralis_Contig746.14.2 ID=prot_P-littoralis_Contig746.14.2|Name=mRNA_P-littoralis_Contig746.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=412bp
MVPPTLPSGYAAEEVAAVKYGDVSGDLEDLIGSGEDFYGSSICDLDIADI
VAAFGDHDIDPTSLDDSSCANGEFVDPYQLFMMDLAQEEHNSTDTGDISS
DSCTALPKSTAPAPAPPSPSPSTIFSGMAATMGLGARPPTAPTTTACSAT
AAAMVVTPAPASAPAVASMATSPVSIPRRSTNGAAIVDAAGTKAAAATRA
ATLAVSTAPTPAVPVPTISATAAATAVSPALAPAPAVGPSAASPMPIPRC
SATGASSGDAAMTTREATEVVSAAPAPAVPAAACSATAAATVVRVVPAPA
SAVRSLVRSSVSIPCCLANGASLGDAAMTTAGTAKRAATMGLGARPPTAP
TTTACSATAAAMVVTPAPAPAPAVASMATSPVSIPRRSTNGAAIVDAAGT
KAAAATRAATLA back to topmRNA from alignment at P-littoralis_Contig746:50579..52474- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig746.14.2 ID=mRNA_P-littoralis_Contig746.14.2|Name=mRNA_P-littoralis_Contig746.14.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1896bp|location=Sequence derived from alignment at P-littoralis_Contig746:50579..52474- (Pylaiella littoralis U1_48)
AGGAGGCATGCTCGCCACCTGCTGGCAAGATGGTGCCCCCCACGCTTCCC
TCTGGATACGCGGCGGAGGAAGTGGCGGCGGTGAAGTACGGCGACGTCAG
TGGTGACCTCGAGGACCTCATCGGTTCCGGTGAGGATTTCTACGGTTCGT
CTATCTGCGACCTCGATATTGCCGACATCGTTGCTGCGTTCGGCGACCAT
GACATCGATCCAACGTCCCTCGACGACAGCAGCTGCGCCAACGGTGAGCG
ATACGAGTTGGAGTTTTTTGGGGGTGGTTGAGAATCCCCTTAGTTTTCCT
TCTCGTGGGACCCTCGCGTAGTTTTAGGTAAGACTGAAGAAGCGCTCGAA
GGTGGCCGGCTAGCCGTTGGGTATGTTTCTGTCGTACAGCTGAAGTTGCC
GCGGACAAGAAGCCCAGACCAGTGCAAGCAGGGAGTAGGAATCGGGTGGA
GACATCTATCTTCGCGTGTCGGGATCAACCTCTAGAAGTTGAAGGTTCCG
TTCGTACCGATGATGACTCTGTTAGAATTGGCGTGATCACACAGCATACT
AAACAAACGTCCCGTGCCAAGTGAGCGAGCTTTCCTGACGAGTATTGCGG
ATGTCCTGATGGAACGAGTGCAGCTCTACACACGTCAACTTTCCATTCCC
ACGTTCGTTTGGACAACTCCACGCTGTCGCTTTTGTAATCTATCAGCATC
CCGTTGCCGCAAACAGTTCCATGCCAACGATGGTGTGTGGTTCCCCAGAG
AAAACAAACAAAGACGCGGTTCGTGTTGAATTTTTCACCTTGGCGTTCGT
CCCAAATTTCGGTAATCCCGGCAGCGTGTCATCGTCACACATCGCCATAT
CTCCCGTCCCTTGAACTGATATAGGCGAATTCGTCGACCCCTACCAGCTT
TTCATGATGGATCTGGCCCAAGAAGAGCATAATTCAACCGACACCGGAGA
CATCAGCTCCGACTCGTGCACAGCGCTGCCCAAGTCAACTGCACCGGCAC
CGGCGCCGCCGTCGCCGTCGCCGTCGACAATCTTTTCAGGAATGGCGGCA
ACCATGGGTCTTGGTGCACGGCCGCCCACAGCACCGACGACGACCGCCTG
CTCAGCAACGGCGGCGGCCATGGTCGTCACCCCAGCGCCGGCATCAGCGC
CGGCGGTGGCGTCAATGGCGACATCACCCGTGTCAATTCCCCGCCGCTCC
ACCAATGGTGCGGCAATCGTGGACGCGGCGGGGACGAAGGCAGCAGCTGC
AACGAGAGCGGCAACCTTGGCTGTCAGCACAGCACCGACACCAGCAGTGC
CGGTACCCACAATCTCAGCAACGGCGGCGGCAACGGCCGTCAGCCCAGCG
CTGGCACCAGCGCCGGCGGTGGGGCCATCGGCGGCCTCGCCCATGCCGAT
CCCCCGCTGCTCCGCCACCGGTGCGTCGTCAGGTGACGCTGCGATGACGA
CAAGGGAGGCGACCGAGGTTGTCAGCGCAGCACCAGCACCAGCAGTACCA
GCAGCCGCCTGCTCGGCAACGGCGGCGGCAACGGTTGTCCGCGTAGTGCC
GGCACCAGCGTCGGCGGTGAGGTCATTGGTGAGATCGTCCGTGTCGATCC
CCTGCTGCCTTGCCAACGGTGCGTCGTTGGGCGACGCGGCGATGACGACG
GCGGGGACGGCAAAGAGGGCAGCAACCATGGGTCTTGGTGCACGGCCGCC
CACAGCACCGACGACGACCGCCTGCTCGGCAACGGCGGCGGCCATGGTCG
TCACCCCAGCGCCGGCGCCCGCGCCGGCGGTGGCGTCAATGGCGACATCA
CCCGTGTCAATTCCCCGCCGCTCCACCAACGGTGCGGCAATCGTGGACGC
GGCGGGGACGAAGGCAGCAGCTGCAACGAGAGCGGCAACCTTGGCT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig746:50579..52474- >mRNA_P-littoralis_Contig746.14.2 ID=mRNA_P-littoralis_Contig746.14.2|Name=mRNA_P-littoralis_Contig746.14.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1236bp|location=Sequence derived from alignment at P-littoralis_Contig746:50579..52474- (Pylaiella littoralis U1_48)
ATGGTGCCCCCCACGCTTCCCTCTGGATACGCGGCGGAGGAAGTGGCGGC
GGTGAAGTACGGCGACGTCAGTGGTGACCTCGAGGACCTCATCGGTTCCG
GTGAGGATTTCTACGGTTCGTCTATCTGCGACCTCGATATTGCCGACATC
GTTGCTGCGTTCGGCGACCATGACATCGATCCAACGTCCCTCGACGACAG
CAGCTGCGCCAACGGCGAATTCGTCGACCCCTACCAGCTTTTCATGATGG
ATCTGGCCCAAGAAGAGCATAATTCAACCGACACCGGAGACATCAGCTCC
GACTCGTGCACAGCGCTGCCCAAGTCAACTGCACCGGCACCGGCGCCGCC
GTCGCCGTCGCCGTCGACAATCTTTTCAGGAATGGCGGCAACCATGGGTC
TTGGTGCACGGCCGCCCACAGCACCGACGACGACCGCCTGCTCAGCAACG
GCGGCGGCCATGGTCGTCACCCCAGCGCCGGCATCAGCGCCGGCGGTGGC
GTCAATGGCGACATCACCCGTGTCAATTCCCCGCCGCTCCACCAATGGTG
CGGCAATCGTGGACGCGGCGGGGACGAAGGCAGCAGCTGCAACGAGAGCG
GCAACCTTGGCTGTCAGCACAGCACCGACACCAGCAGTGCCGGTACCCAC
AATCTCAGCAACGGCGGCGGCAACGGCCGTCAGCCCAGCGCTGGCACCAG
CGCCGGCGGTGGGGCCATCGGCGGCCTCGCCCATGCCGATCCCCCGCTGC
TCCGCCACCGGTGCGTCGTCAGGTGACGCTGCGATGACGACAAGGGAGGC
GACCGAGGTTGTCAGCGCAGCACCAGCACCAGCAGTACCAGCAGCCGCCT
GCTCGGCAACGGCGGCGGCAACGGTTGTCCGCGTAGTGCCGGCACCAGCG
TCGGCGGTGAGGTCATTGGTGAGATCGTCCGTGTCGATCCCCTGCTGCCT
TGCCAACGGTGCGTCGTTGGGCGACGCGGCGATGACGACGGCGGGGACGG
CAAAGAGGGCAGCAACCATGGGTCTTGGTGCACGGCCGCCCACAGCACCG
ACGACGACCGCCTGCTCGGCAACGGCGGCGGCCATGGTCGTCACCCCAGC
GCCGGCGCCCGCGCCGGCGGTGGCGTCAATGGCGACATCACCCGTGTCAA
TTCCCCGCCGCTCCACCAACGGTGCGGCAATCGTGGACGCGGCGGGGACG
AAGGCAGCAGCTGCAACGAGAGCGGCAACCTTGGCT back to top
|