mRNA_P-littoralis_Contig743.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5L2D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D3_9PHAE) HSP 1 Score: 501 bits (1291), Expect = 1.060e-170 Identity = 241/366 (65.85%), Postives = 290/366 (79.23%), Query Frame = 3
Query: 240 NVPELLVTFLDAFGHRYSDKKGAVEEELERSRASRKCLIAGVLTSFAFDSWYKNANTMGLFLKGQGIQRDGLDFLATNFKITQPDAHVYGLRSKLAGILGTESQMMKLIPVTNALVACSFDNLNLDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEV 1337
NVP L FLDA Y ++ A +++L R+R +RKCL+AGVLTSFA ++WYKNAN GLFLK Q IQRDGLDFLA+NFKI+Q D H++ LR++LA ILGTES+M KL+P+T AL+A SFDNLN+DV+RH G GGHVDLIAAIAYF VL +RE V + PP LD RDFG + R +IW +FR +V+AC R S K+DGDFE+ VA++VI+DA E MVGVE RRVPSDV+A YLGVVKLGTKTL DIIEYLDGLKQ LH G E GRRRAVIVGDQETF L+HKAK Y K+ WA+PW+GDWHLLEHTLDVMF KWGGF I+PLAK S C++ KLE K+YH RHNVF+G+++A W+AC+ EV
Sbjct: 40 NVPPELGAFLDALA--YPVEEDANDDDLVRARVARKCLLAGVLTSFAHETWYKNANISGLFLKDQWIQRDGLDFLASNFKISQTDNHLWKLRTRLADILGTESEMKKLVPLTAALMAASFDNLNVDVLRHWGAGGHVDLIAAIAYFHVLKTREKVTELQCVPPTLDFARDFGPDNERLMEIWGQFRRRVVACVRRDSVKSDGDFEVQVARQVIDDAHEERMVGVEDRRVPSDVKATYLGVVKLGTKTLPDIIEYLDGLKQVLHAGAEHGRRRAVIVGDQETFNLVHKAKQKYEVKYTWAIPWVGDWHLLEHTLDVMFLKWGGFGIMPLAKRSDCYNNKLEKKDYHNRHNVFIGIMEAAWRACVAEV 403
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5KQE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE5_9PHAE) HSP 1 Score: 513 bits (1320), Expect = 6.150e-166 Identity = 251/371 (67.65%), Postives = 294/371 (79.25%), Query Frame = 3
Query: 243 VPELLVTFLDAFGHRYSDKKGAVEEELERSRASRKCLIAGVLTSFAFDSWYKNANTMGLFLKGQGIQRDGLDFLATNFKITQPDAHVYGLRSKLAGILGTESQMMKLIPVTNALVACSFDNLNLDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEVEAPPAS 1355
VP +LV FLD Y + A + + +RASR+CL+AGVLTSFA D+WYKNAN +GLFLK QG+QRDGLDFLA + KITQ D H++ LR++LA ILGTE++M KL+P+T ALVA SFDNLNLDV+RH G+GGHVDLIAAIAYF VL SR V + SF PP LD RDFG ++ R IW +FR +V+AC R S K+DGDFE+ VA++VI+DA E MVGVEGRRVPSDV+ YLGV+K GTKTL DII+YLDGLKQ LHVG E+GRRRAVIVGDQETF LLHKAK Y KFAWA+PW+GDWHLLEHTLDVMF KWGGF IIPLAK S C++ KLE ++YH RHNVFVGVL+AVWKACI EV AS
Sbjct: 41 VPPVLVAFLDELA--YPSMEDANGDGVATARASRQCLLAGVLTSFAHDTWYKNANILGLFLKDQGMQRDGLDFLANSLKITQTDNHLWKLRTRLADILGTETEMKKLVPLTAALVAASFDNLNLDVLRHWGKGGHVDLIAAIAYFPVLASRGKVAELSFVPPRLDFARDFGVENERLLAIWSQFRHRVVACVRRDSAKSDGDFEVQVARQVISDADAERMVGVEGRRVPSDVKTTYLGVIKSGTKTLPDIIDYLDGLKQVLHVGAENGRRRAVIVGDQETFNLLHKAKQKYEVKFAWAIPWVGDWHLLEHTLDVMFLKWGGFGIIPLAKLSDCYNNKLEKRDYHNRHNVFVGVLEAVWKACISEVGGSSAS 409
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE) HSP 1 Score: 378 bits (970), Expect = 7.180e-118 Identity = 200/375 (53.33%), Postives = 249/375 (66.40%), Query Frame = 3
Query: 243 VPELLVTFLDAFGHRYS--DKKGAVEEELERSRASRKCLIAGVLTSFAFDSWYKNANTMGLFLKGQGIQRDGLDFLATNFKITQPDAHVYGLRSKLAGILGTESQMMKLIPVTNALVACSFDNLNLDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEVEAPPASHG 1361
+P L+V FL+ G++++ D +G V+EEL RSRASRKCL+AGVLTSFAF++W KNAN MG FLKGQG+QRDGL+FLA+ FKITQ D H++ +R+KLA +LGTE++M KLIP+ + LVA SFDN+N++V+RH G GGHVDL+A IAY+ VLTSR + + + TPP L RDF + R +IW FR +VL C TK DG FEM VAKR I D+ +GVEGR VPSDV A YLGVV LGTKT+ +I+EYL GL LHVG E GRRRAV+VGDQE FTL+HKA + C+DKKLE KNYHK HN FVG L+A+W+ CI EV+ S G
Sbjct: 83 IPPLMVAFLNELGYQHAEVDVEGDVKEELWRSRASRKCLMAGVLTSFAFNTWNKNANAMGFFLKGQGLQRDGLEFLASIFKITQSDRHLWEMRTKLADVLGTEAEMRKLIPLPSVLVAASFDNVNMEVLRHWGIGGHVDLVAGIAYYHVLTSRGRMSELTHTPPKLLFARDFSSTTPRIVEIWGGFRSRVLQCVFGDFTKVDGYFEMRVAKRHIRDSAAGKALGVEGRCVPSDVIARYLGVVLLGTKTVEEIMEYLHGLHDVLHVGVEKGRRRAVVVGDQENFTLVHKA-------------------------------------------ADCYDKKLEGKNYHKWHNFFVGFLEALWRGCIGEVKETSQSGG 414
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5JCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT7_9PHAE) HSP 1 Score: 340 bits (873), Expect = 4.980e-108 Identity = 187/368 (50.82%), Postives = 228/368 (61.96%), Query Frame = 3
Query: 240 NVPELLVTFLDAFGHRYSDKKGAVE--EELERSRASRKCLIAGVLTSFAFDSWYKNANTMGLFLKGQGIQRDGLDFLATNFKITQPDAHVYGLRSKLAGILGTESQMMKLIPVTNALVACSFDNLNLDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEV 1337
+VP LL TFL+ G R K A E EE+E + ASRKCLIA ++TSFAFD+WYKNAN M +FLK +GIQRD LDFLA FKI Q D++VY ++ KLA LGT+ +M+K +P++ LVACSFDNLNLDV+RH G+GGHVDLIAAIAYF V SR+ V L RDFG R IW+ FR V++CAR+ TK DGDFEM +AK +I+DA + M+GV G RR + F K +L S + W + WHLLEHTLDV++RKWGGFA+IPLAK S CHDKKLE KNYHKRHNVFVGV++AVW+ACI EV
Sbjct: 94 DVPRLLATFLNELGPR---SKAAEEGNEEIENAVASRKCLIAAIVTSFAFDTWYKNANAMTIFLKSRGIQRDWLDFLARTFKIAQTDSYVYKVQKKLADSLGTKEEMLKRVPLSEGLVACSFDNLNLDVLRHWGKGGHVDLIAAIAYFAVSQSRQKVTSLRSERRKLGFRRDFGQDHPRILGIWESFRLNVVSCARKPYTKTDGDFEMRLAKVIIHDAPRKSMLGV--------------------------------------------GIRRPTL------FCTRRKPNTLRSLR-GWCRGSVIGWHLLEHTLDVLYRKWGGFAMIPLAKASDCHDKKLESKNYHKRHNVFVGVVEAVWQACISEV 407
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5KGL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL9_9PHAE) HSP 1 Score: 339 bits (869), Expect = 9.530e-105 Identity = 159/284 (55.99%), Postives = 204/284 (71.83%), Query Frame = 3
Query: 510 LRSKLAGILGTESQMMKLIPVTNALVACSFDNLNLDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEVEAPPASHG 1361
+R++LA LG+E +M KL+PV LVACSFDN+NLDV RH G HVDL+AAIAY SR + PP L+ VRDFGT + R W+RFR QVLAC +E + + DGDFE+ +A+RVI DA E VGVEGRR+P +V YLGV+ + TK + DI+ +LDGL+ +H+G E GR RAV+ GDQETFTL+HKAK + AK+ W LPWIGDWHLLEHTLDV+FRKWGG IIPLAK + + KKLE KNYHKR+ F +L+A+W AC+ E+++ ++ G
Sbjct: 1 MRTRLADRLGSEREMKKLVPVCAGLVACSFDNVNLDVNRHFGGSSHVDLVAAIAYHHTSASRRQRAELPQRPPKLNFVRDFGTSEPRMVLTWERFRAQVLACVQERAVEEDGDFEVRLARRVIRDAAPEERVGVEGRRIPEEVTTKYLGVIDVTTKVVKDIVTFLDGLQHVIHIGAEGGRGRAVVAGDQETFTLVHKAKKQFGAKYDWVLPWIGDWHLLEHTLDVLFRKWGGGCIIPLAKAADAYTKKLESKNYHKRYFAFRRILEALWGACVGEIKSQHSTDG 284
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5L7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q2_9PHAE) HSP 1 Score: 336 bits (862), Expect = 3.680e-104 Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 3
Query: 612 LDVVRH*GEGGHVDLIAAIAYFQVLTSREYVPDPSFTPPMLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVINDARGEGMVGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEVEAPPASHG 1361
+DV+RH G+GGHVDL+A IAY+ VLTSR + + + TPP L RDF + R KIW FR +VL C TK DGDFEM VAKR I D+ +GVEGR VPSDV A YLGVV LGTKT+ DIIEYLDGL LHVG E GRRRAV+VGDQETFTL+HK K L+ K+AW +PWIGDWHLLEHTLDV+FRKWGGFA+IPLAK + C+DKKLE KNYHKRHN FVG L+A+W+ACI EV+ P S G
Sbjct: 1 MDVLRHWGKGGHVDLVAGIAYYHVLTSRGRMWELTHTPPKLLFARDFSSTTPRIVKIWRGFRSRVLHCVFGDFTKVDGDFEMPVAKRHIRDSAAGRALGVEGRCVPSDVIASYLGVVLLGTKTVEDIIEYLDGLHDVLHVGVEKGRRRAVVVGDQETFTLVHKVKKLHKDKYAWVVPWIGDWHLLEHTLDVLFRKWGGFALIPLAKAADCYDKKLEGKNYHKRHNFFVGFLEALWRACIGEVKETPQSGG 250
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5JPG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG5_9PHAE) HSP 1 Score: 147 bits (370), Expect = 6.480e-37 Identity = 67/116 (57.76%), Postives = 85/116 (73.28%), Query Frame = 3
Query: 993 IEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESGCHDKKLEVKNYHKRHNVFVGVLQAVWKACIEEVE 1340
+EYLDGL LHVG + + G + ++K+L+ K+AWALPWIGDWHLLEHT DV+FRKWGGFA+IPLAK + C+DKKLE K YHKRH+ FVG L+A+ +ACI EV+
Sbjct: 1 MEYLDGLHDVLHVGVDREGGARSLEGTRRPSPSCTRSKNLHEDKYAWALPWIGDWHLLEHTPDVLFRKWGGFALIPLAKAADCYDKKLEGKTYHKRHHFFVGFLEALRQACIGEVK 116
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A6H5L8B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B8_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 4.970e-7 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 1 ISNGVPIGRSHAHVITDGRSAPVVLYPYIHCMAQVASIVANMNEAVERANLKTRQPEEEVACLTKPRNAQEPDDNATMRL 240
IS PIGRS A I D R+ PV++YPYIH MAQ+ S+V N++ +E A + R+ + ++A + +P D T+RL
Sbjct: 45 ISEITPIGRSTATFIEDNRTNPVLVYPYIHSMAQIGSLVGNLHADIETARAEVRRLKRDLAHERGSNASNKPADIDTVRL 124
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Match: A0A8J9WDE6_BRALA (Hypp454 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9WDE6_BRALA) HSP 1 Score: 59.3 bits (142), Expect = 1.260e-5 Identity = 36/143 (25.17%), Postives = 72/143 (50.35%), Query Frame = 3
Query: 903 VGVEGRRVPSDVQAHYLGVVKLGTKTLGDIIEYLDGLKQALHVGPESGRRRAVIVGDQETFTLLHKAKSLYSAKFAWALPWIGDWHLLEHTLDVMFRKWGGFAIIPLAKESG----CHDKKLEVKNYHKRHNVFVGVLQAVWK 1319
+ +EG + +L + L +I L + A ++G R+ ++VGD +T+ LL K K Y ++F+WA ++GDWH+L++T +V+ + + + +A+E+ C KN+ H + V +A+++
Sbjct: 513 LAMEGNQDVQQSSIQFLDIFDLPCDNEDTMIHVLHQI--ATNMGIPEKRQSLILVGDGKTYDLLWKVKKKYPSEFSWAHLYMGDWHVLKNTQEVIMKIFWDSGLKEMAQETHGNGMCATSIGLCKNFRGTHIFLMNVWEAMFQ 653 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig743.19.1 >prot_P-littoralis_Contig743.19.1 ID=prot_P-littoralis_Contig743.19.1|Name=mRNA_P-littoralis_Contig743.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp MLDLVRDFGTQDGRTSKIWDRFRCQVLACARETSTKADGDFEMAVAKRVIback to top mRNA from alignment at P-littoralis_Contig743:34243..35727- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig743.19.1 ID=mRNA_P-littoralis_Contig743.19.1|Name=mRNA_P-littoralis_Contig743.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1485bp|location=Sequence derived from alignment at P-littoralis_Contig743:34243..35727- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig743:34243..35727- >mRNA_P-littoralis_Contig743.19.1 ID=mRNA_P-littoralis_Contig743.19.1|Name=mRNA_P-littoralis_Contig743.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig743:34243..35727- (Pylaiella littoralis U1_48)back to top |