mRNA_P-littoralis_Contig743.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JBA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA3_9PHAE) HSP 1 Score: 449 bits (1155), Expect = 1.970e-147 Identity = 236/379 (62.27%), Postives = 275/379 (72.56%), Query Frame = 3
Query: 33 LFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREE-DNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPN--RHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS-TKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
L+ P+ FGL D TP +SEWQ+FLKNRQ+RDGV VLCQYI + G IR+K QLEWAEHC+ +RL++DGEP++S + TTTGY SW+N DG E EE DNG+GEGELQALHH Y V QQ S +GSREGQ R PV VEVVSVDTD+WVAALLA+A +P TRNVRVVVR+ G+ DQAAVTC+DVL++F LT L +WP FT LQKCLPVIAAYMLCGTDFTPT FG TSFFMF++YF+ N ENHRF+KALG +DG V GV L REELIKFVALAYF K + F PG+QV+P+V+P G D T+ WV AIH RTSE YG G + AAPNYDV +LCVLRM WLVEYW
Sbjct: 359 LYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIHRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWYNDVDGAEIPEEKDNGLGEGELQALHHVYQVCLQQQ---------SREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGA-VDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYW 726
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KQE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE5_9PHAE) HSP 1 Score: 451 bits (1160), Expect = 1.140e-143 Identity = 237/379 (62.53%), Postives = 276/379 (72.82%), Query Frame = 3
Query: 33 LFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREE-DNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPN--RHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS-TKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
L+ P+ FGL D TP +SEWQ+FLKNRQ+RDGV VLCQYIR+ G IR+K QLEWAEHC+ +RL++DGEP++S + TTTGY SW+N DG E EE DNG+GEGELQALHH Y V QQ S +GSREGQ R PV VEVVSVDTD+WVAALLA+A +P TRNVRVVVR+ G+ DQAAVTC+DVL++F LT L +WP FT LQKCLPVIAAYMLCGTDFTPT FG TSFFMF++YF+ N ENHRF+KALG +DG V GV L REELIKFVALAYF K + F PG+QV+P+V+P G D T+ WV AIH RTSE YG G + AAPNYDV +LCVLRM WLVEYW
Sbjct: 853 LYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIRRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWYNDVDGAEIPEEKDNGLGEGELQALHHVYQVCLQQQ---------SREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGA-VDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYW 1220
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KUZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ3_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.070e-119 Identity = 195/354 (55.08%), Postives = 230/354 (64.97%), Query Frame = 3
Query: 96 QDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
QDFLKNRQH DGVF VLCQYIR + IR K N + E C+ LRL +DGEP++S +L T + SWHN D +E NGIGEGELQALHHAYLV R PL+GE G+SS+ ++EGQ PV VEVVS+ D+WVAALLA+A+YP R VRVVVRQ G+ND+A V CIDVL++FE L + NWP FT LQ+CLPVIA+YML GTDFTPT+ GL+SFFMF++YF+L+ NAENH+FVKALG+ ELI+ G G D T WV AI ERT+EKWYG GNLS AAPNYD ELCVLRM WLVEYW
Sbjct: 157 QDFLKNRQHHDGVFSVLCQYIRGKFESIRAKKSNNTAMTPWEDCLGNLRLLIDGEPILSQDFLETLHFKSWHNDKDSLIIGDEGNGIGEGELQALHHAYLVGRTAGPLTGEGGGSSSENNQEGQGETPPVRVEVVSIHRDVWVAALLAYALYPHIRIVRVVVRQQSGLNDEAVVNCIDVLELFEALAKMENWPHSFTGLQRCLPVIASYMLNGTDFTPTLSGLSSFFMFQSYFELAKNAENHQFVKALGT---------------ELIE-------------------------------DGEGEVDDTRRWVEAIQERTAEKWYGAGNLSKAAPNYDAAELCVLRMSWLVEYW 464
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 2.620e-77 Identity = 138/286 (48.25%), Postives = 189/286 (66.08%), Query Frame = 3
Query: 3 KRKRKRTPEVLFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDG 860
K+K + P+ LF P F + D TP A+EWQ FL++RQHRDGVF LC++IR Y IR+K + LE+ E C+Q L+L++DGEPV+ + Y T Y+SW+NT + E NGIGEGELQALHHAY+ + G+ G +G + PV VEVVSVDTD+W+AALLA+AV+PSTR+VR++VRQ GV V CIDVLK+ + L+ + WP FT+LQ+ L +++A++L GTDFTP++ G T+ MF+ Y L +A NH FV LGS + +G
Sbjct: 740 KKKPRAPPQPLFTKAPTGFEIGDKTPDAAEWQTFLEDRQHRDGVFSALCKFIRHQYDTIRKKTSDGVGLEYGESCLQRLQLEVDGEPVLFSDYSRTKSYLSWYNTKELDIILLEANGIGEGELQALHHAYMTGKNNKESRGQG-GEVREGGVVVPTSEDPVTVEVVSVDTDVWMAALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLLQDLSAMRFWPSSFTNLQRVLSIVSAFVLNGTDFTPSLSGFTASSMFQAYNALK-DAGNHNFVLPLGSEQREG 1023
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KUA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA8_9PHAE) HSP 1 Score: 147 bits (371), Expect = 6.810e-40 Identity = 70/122 (57.38%), Postives = 93/122 (76.23%), Query Frame = 3
Query: 480 PVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS 845
PV+VEV SVDTD+W+AALL++AV+PSTR+VR++VRQ G+ V CID+LK+F+ LT + NWP FT LQ LP+I+AY+L GTD+TPT+ GLT+ MF+ Y+D +A NH FV LGS
Sbjct: 7 PVIVEVFSVDTDVWIAALLSYAVHPSTRDVRIIVRQQSGMAVNTNVHCIDLLKLFQDLTAMRNWPSSFTKLQSVLPIISAYVLNGTDYTPTLSGLTASSMFQAYYDALKDAGNHNFVLPLGS 128
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KC27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC27_9PHAE) HSP 1 Score: 132 bits (333), Expect = 5.580e-34 Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 3
Query: 471 NRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFD 797
++ PV+VEV SVDTD+W+AALLA+AV+PSTR+VR++VRQ GV IDVLK+ + LT + NWP FT+LQ+ LP+I AY+L GTDFTPT+ GLT+ MF+ Y+D
Sbjct: 26 SKDPVIVEVFSVDTDVWIAALLAYAVHPSTRDVRIIVRQQSGVTGNTHAHGIDVLKLLQDLTAMRNWPSSFTNLQRVLPIIFAYVLNGTDFTPTLNGLTTSSMFQAYYD 134
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5L7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q2_9PHAE) HSP 1 Score: 141 bits (356), Expect = 3.520e-33 Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = 3
Query: 3 KRKRKRTPEVLFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRV 575
K+K + P+ F P F + D TP+A+EWQ FL++RQHRDGVF VLC++IR Y IR+K + LE+ E C+Q L+L++DGE V+S+ T Y+SW+NT + E NGIGEG G VEVVSVDTD+W+AALLA+AV+PSTR+VR+
Sbjct: 631 KKKPRAPPQPPFTKAPTGFEIRDKTPEAAEWQTFLEDRQHRDGVFSVLCKFIRHQYDTIRKKTSDGVGLEYGESCLQRLQLEVDGESVLSSDCSRTESYLSWYNTKELDIVLLEANGIGEG----------------------------GG-----------VEVVSVDTDVWMAALLAYAVHPSTRDVRI 782
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JPJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ8_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.160e-32 Identity = 60/113 (53.10%), Postives = 85/113 (75.22%), Query Frame = 3
Query: 525 AALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGV 863
AALLA+AV+PSTR+VR++VRQ GV V CIDVLK+F+ L+ + NWP FT+LQ+ LP+++A++L GTDFTPT+ GLT+ +F+ ++D +A NH FV LGS + +GV
Sbjct: 2 AALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLFQDLSAMRNWPSSFTNLQRVLPIVSAFVLNGTDFTPTLSGLTASSVFQAFYDALKDAGNHNFVLPLGSEQREGV 114
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JVH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH3_9PHAE) HSP 1 Score: 119 bits (298), Expect = 5.040e-29 Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 3
Query: 528 ALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS 845
ALLA+AV+PSTR+V ++VRQ GV V CIDVLK+F+ LT + +WP FT+LQ+ LP+I AY+L GTDFTPT+ GLT+ M + Y+D +A NH FV LGS
Sbjct: 34 ALLAYAVHPSTRDVHIIVRQQSGVTGNTNVHCIDVLKLFQDLTAMRDWPTSFTNLQRVLPIIYAYVLNGTDFTPTLSGLTASSMSQAYYDALKDAGNHNFVLPLGS 139
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5LLB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLB8_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.760e-26 Identity = 51/89 (57.30%), Postives = 70/89 (78.65%), Query Frame = 3
Query: 525 AALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTY 791
AALLA+AV+PSTR+VR++VRQ GV V CIDVLK+F+ L+ + NWP FT+LQ+ LP+++A++L GTDFTPT+ GLT+ MF+ Y
Sbjct: 2 AALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLFQDLSAMRNWPSSFTNLQRVLPIVSAFVLDGTDFTPTLSGLTASSMFQAY 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig743.16.1 >prot_P-littoralis_Contig743.16.1 ID=prot_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=145bp MLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGVVTGback to top mRNA from alignment at P-littoralis_Contig743:31793..32949- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig743.16.1 ID=mRNA_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1157bp|location=Sequence derived from alignment at P-littoralis_Contig743:31793..32949- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig743:31793..32949- >mRNA_P-littoralis_Contig743.16.1 ID=mRNA_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig743:31793..32949- (Pylaiella littoralis U1_48)back to top |