mRNA_P-littoralis_Contig743.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig743.16.1
Unique NamemRNA_P-littoralis_Contig743.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JBA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA3_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 1.970e-147
Identity = 236/379 (62.27%), Postives = 275/379 (72.56%), Query Frame = 3
Query:   33 LFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREE-DNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPN--RHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS-TKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
            L+   P+ FGL D TP +SEWQ+FLKNRQ+RDGV  VLCQYI +  G IR+K     QLEWAEHC+  +RL++DGEP++S  + TTTGY SW+N  DG E  EE DNG+GEGELQALHH Y V  QQ          S +GSREGQ    R PV VEVVSVDTD+WVAALLA+A +P TRNVRVVVR+  G+ DQAAVTC+DVL++F  LT L +WP  FT LQKCLPVIAAYMLCGTDFTPT FG TSFFMF++YF+   N ENHRF+KALG    +DG V GV L REELIKFVALAYF K +  F    PG+QV+P+V+P    G   D T+ WV AIH RTSE  YG G +  AAPNYDV +LCVLRM WLVEYW
Sbjct:  359 LYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIHRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWYNDVDGAEIPEEKDNGLGEGELQALHHVYQVCLQQQ---------SREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGA-VDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYW 726          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KQE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE5_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 1.140e-143
Identity = 237/379 (62.53%), Postives = 276/379 (72.82%), Query Frame = 3
Query:   33 LFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREE-DNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPN--RHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS-TKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
            L+   P+ FGL D TP +SEWQ+FLKNRQ+RDGV  VLCQYIR+  G IR+K     QLEWAEHC+  +RL++DGEP++S  + TTTGY SW+N  DG E  EE DNG+GEGELQALHH Y V  QQ          S +GSREGQ    R PV VEVVSVDTD+WVAALLA+A +P TRNVRVVVR+  G+ DQAAVTC+DVL++F  LT L +WP  FT LQKCLPVIAAYMLCGTDFTPT FG TSFFMF++YF+   N ENHRF+KALG    +DG V GV L REELIKFVALAYF K +  F    PG+QV+P+V+P    G   D T+ WV AIH RTSE  YG G +  AAPNYDV +LCVLRM WLVEYW
Sbjct:  853 LYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIRRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWYNDVDGAEIPEEKDNGLGEGELQALHHVYQVCLQQQ---------SREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGA-VDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYW 1220          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KUZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ3_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 2.070e-119
Identity = 195/354 (55.08%), Postives = 230/354 (64.97%), Query Frame = 3
Query:   96 QDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGVVTGVDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADATEPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW 1157
            QDFLKNRQH DGVF VLCQYIR  +  IR K  N   +   E C+  LRL +DGEP++S  +L T  + SWHN  D     +E NGIGEGELQALHHAYLV R   PL+GE  G+SS+ ++EGQ    PV VEVVS+  D+WVAALLA+A+YP  R VRVVVRQ  G+ND+A V CIDVL++FE L  + NWP  FT LQ+CLPVIA+YML GTDFTPT+ GL+SFFMF++YF+L+ NAENH+FVKALG+               ELI+                                G G  D T  WV AI ERT+EKWYG GNLS AAPNYD  ELCVLRM WLVEYW
Sbjct:  157 QDFLKNRQHHDGVFSVLCQYIRGKFESIRAKKSNNTAMTPWEDCLGNLRLLIDGEPILSQDFLETLHFKSWHNDKDSLIIGDEGNGIGEGELQALHHAYLVGRTAGPLTGEGGGSSSENNQEGQGETPPVRVEVVSIHRDVWVAALLAYALYPHIRIVRVVVRQQSGLNDEAVVNCIDVLELFEALAKMENWPHSFTGLQRCLPVIASYMLNGTDFTPTLSGLSSFFMFQSYFELAKNAENHQFVKALGT---------------ELIE-------------------------------DGEGEVDDTRRWVEAIQERTAEKWYGAGNLSKAAPNYDAAELCVLRMSWLVEYW 464          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.620e-77
Identity = 138/286 (48.25%), Postives = 189/286 (66.08%), Query Frame = 3
Query:    3 KRKRKRTPEVLFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDG 860
            K+K +  P+ LF   P  F + D TP A+EWQ FL++RQHRDGVF  LC++IR  Y  IR+K  +   LE+ E C+Q L+L++DGEPV+ + Y  T  Y+SW+NT +      E NGIGEGELQALHHAY+  +      G+  G   +G      +  PV VEVVSVDTD+W+AALLA+AV+PSTR+VR++VRQ  GV     V CIDVLK+ + L+ +  WP  FT+LQ+ L +++A++L GTDFTP++ G T+  MF+ Y  L  +A NH FV  LGS + +G
Sbjct:  740 KKKPRAPPQPLFTKAPTGFEIGDKTPDAAEWQTFLEDRQHRDGVFSALCKFIRHQYDTIRKKTSDGVGLEYGESCLQRLQLEVDGEPVLFSDYSRTKSYLSWYNTKELDIILLEANGIGEGELQALHHAYMTGKNNKESRGQG-GEVREGGVVVPTSEDPVTVEVVSVDTDVWMAALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLLQDLSAMRFWPSSFTNLQRVLSIVSAFVLNGTDFTPSLSGFTASSMFQAYNALK-DAGNHNFVLPLGSEQREG 1023          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KUA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA8_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 6.810e-40
Identity = 70/122 (57.38%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  480 PVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS 845
            PV+VEV SVDTD+W+AALL++AV+PSTR+VR++VRQ  G+     V CID+LK+F+ LT + NWP  FT LQ  LP+I+AY+L GTD+TPT+ GLT+  MF+ Y+D   +A NH FV  LGS
Sbjct:    7 PVIVEVFSVDTDVWIAALLSYAVHPSTRDVRIIVRQQSGMAVNTNVHCIDLLKLFQDLTAMRNWPSSFTKLQSVLPIISAYVLNGTDYTPTLSGLTASSMFQAYYDALKDAGNHNFVLPLGS 128          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5KC27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC27_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 5.580e-34
Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 3
Query:  471 NRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFD 797
            ++ PV+VEV SVDTD+W+AALLA+AV+PSTR+VR++VRQ  GV        IDVLK+ + LT + NWP  FT+LQ+ LP+I AY+L GTDFTPT+ GLT+  MF+ Y+D
Sbjct:   26 SKDPVIVEVFSVDTDVWIAALLAYAVHPSTRDVRIIVRQQSGVTGNTHAHGIDVLKLLQDLTAMRNWPSSFTNLQRVLPIIFAYVLNGTDFTPTLNGLTTSSMFQAYYD 134          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5L7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.520e-33
Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = 3
Query:    3 KRKRKRTPEVLFAHKPWSFGLEDATPQASEWQDFLKNRQHRDGVFHVLCQYIRQTYGHIREKGQNRKQLEWAEHCVQLLRLQMDGEPVMSAYYLTTTGYMSWHNTPDGTETREEDNGIGEGELQALHHAYLVSRQQPPLSGESDGTSSDGSREGQPNRHPVLVEVVSVDTDIWVAALLAFAVYPSTRNVRV 575
            K+K +  P+  F   P  F + D TP+A+EWQ FL++RQHRDGVF VLC++IR  Y  IR+K  +   LE+ E C+Q L+L++DGE V+S+    T  Y+SW+NT +      E NGIGEG                            G            VEVVSVDTD+W+AALLA+AV+PSTR+VR+
Sbjct:  631 KKKPRAPPQPPFTKAPTGFEIRDKTPEAAEWQTFLEDRQHRDGVFSVLCKFIRHQYDTIRKKTSDGVGLEYGESCLQRLQLEVDGESVLSSDCSRTESYLSWYNTKELDIVLLEANGIGEG----------------------------GG-----------VEVVSVDTDVWMAALLAYAVHPSTRDVRI 782          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JPJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.160e-32
Identity = 60/113 (53.10%), Postives = 85/113 (75.22%), Query Frame = 3
Query:  525 AALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGV 863
            AALLA+AV+PSTR+VR++VRQ  GV     V CIDVLK+F+ L+ + NWP  FT+LQ+ LP+++A++L GTDFTPT+ GLT+  +F+ ++D   +A NH FV  LGS + +GV
Sbjct:    2 AALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLFQDLSAMRNWPSSFTNLQRVLPIVSAFVLNGTDFTPTLSGLTASSVFQAFYDALKDAGNHNFVLPLGSEQREGV 114          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5JVH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH3_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.040e-29
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 3
Query:  528 ALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGS 845
            ALLA+AV+PSTR+V ++VRQ  GV     V CIDVLK+F+ LT + +WP  FT+LQ+ LP+I AY+L GTDFTPT+ GLT+  M + Y+D   +A NH FV  LGS
Sbjct:   34 ALLAYAVHPSTRDVHIIVRQQSGVTGNTNVHCIDVLKLFQDLTAMRDWPTSFTNLQRVLPIIYAYVLNGTDFTPTLSGLTASSMSQAYYDALKDAGNHNFVLPLGS 139          
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Match: A0A6H5LLB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLB8_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.760e-26
Identity = 51/89 (57.30%), Postives = 70/89 (78.65%), Query Frame = 3
Query:  525 AALLAFAVYPSTRNVRVVVRQ*IGVNDQAAVTCIDVLKIFEWLTGLGNWPQPFTDLQKCLPVIAAYMLCGTDFTPTVFGLTSFFMFKTY 791
            AALLA+AV+PSTR+VR++VRQ  GV     V CIDVLK+F+ L+ + NWP  FT+LQ+ LP+++A++L GTDFTPT+ GLT+  MF+ Y
Sbjct:    2 AALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLFQDLSAMRNWPSSFTNLQRVLPIVSAFVLDGTDFTPTLSGLTASSMFQAY 90          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JBA3_9PHAE1.970e-14762.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQE5_9PHAE1.140e-14362.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUZ3_9PHAE2.070e-11955.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV8_9PHAE2.620e-7748.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KUA8_9PHAE6.810e-4057.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC27_9PHAE5.580e-3457.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Q2_9PHAE3.520e-3342.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPJ8_9PHAE1.160e-3253.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVH3_9PHAE5.040e-2955.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LLB8_9PHAE2.760e-2657.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig743contigP-littoralis_Contig743:31793..32949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1157
Hectar predicted targeting categoryother localisation
Exons1
Cds size435
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791538.5563812-CDS-P-littoralis_Contig743:31792..322271680791538.5563812-CDS-P-littoralis_Contig743:31792..32227Pylaiella littoralis U1_48CDSP-littoralis_Contig743 31793..32227 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791538.5675046-UTR-P-littoralis_Contig743:32227..329491680791538.5675046-UTR-P-littoralis_Contig743:32227..32949Pylaiella littoralis U1_48UTRP-littoralis_Contig743 32228..32949 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig743.16.1prot_P-littoralis_Contig743.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig743 31793..32227 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig743.16.1

>prot_P-littoralis_Contig743.16.1 ID=prot_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=145bp
MLCGTDFTPTVFGLTSFFMFKTYFDLSTNAENHRFVKALGSTKEDGVVTG
VDLSREELIKFVALAYFVKNRPLFANQLPGYQVDPVVNPLPPGGGPADAT
EPWVAAIHERTSEKWYGVGNLSNAAPNYDVTELCVLRMLWLVEYW
back to top

mRNA from alignment at P-littoralis_Contig743:31793..32949-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig743.16.1 ID=mRNA_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1157bp|location=Sequence derived from alignment at P-littoralis_Contig743:31793..32949- (Pylaiella littoralis U1_48)
CCAAAAGGAAGAGGAAGAGAACGCCTGAGGTCTTGTTCGCGCACAAGCCC TGGAGCTTTGGTTTGGAGGATGCAACGCCTCAGGCGAGTGAGTGGCAAGA CTTCTTGAAGAACCGGCAGCACCGTGATGGCGTTTTTCATGTGTTATGCC AGTACATCCGTCAGACGTATGGACACATTCGAGAGAAAGGACAAAATAGA AAGCAGTTGGAGTGGGCAGAGCATTGTGTTCAACTTTTGCGCCTACAGAT GGATGGGGAGCCAGTGATGTCCGCTTACTACTTGACGACAACAGGATACA TGTCGTGGCACAACACACCGGACGGTACGGAGACTAGAGAAGAGGACAAC GGTATCGGGGAAGGCGAACTCCAGGCACTACACCACGCGTATCTGGTTTC CCGACAACAGCCTCCATTGTCTGGGGAGAGCGATGGCACTAGCTCCGACG GCAGCCGGGAAGGTCAACCGAATCGACACCCCGTTTTAGTGGAGGTTGTA TCCGTCGACACGGATATTTGGGTAGCAGCTCTCCTTGCGTTCGCGGTGTA CCCGTCGACTCGAAACGTGCGTGTAGTTGTTCGACAATAGATCGGGGTGA ACGACCAAGCCGCTGTTACCTGCATCGATGTACTAAAAATTTTCGAGTGG CTGACGGGATTGGGGAATTGGCCGCAACCGTTTACGGACTTACAGAAGTG TTTGCCGGTGATCGCTGCCTACATGCTTTGCGGCACCGACTTTACCCCGA CTGTTTTTGGTTTGACTTCGTTCTTCATGTTCAAAACATACTTTGACTTG TCGACAAATGCCGAAAACCATAGGTTCGTCAAGGCCCTGGGTTCCACCAA AGAGGATGGGGTGGTCACCGGGGTTGATTTGAGCAGAGAGGAATTGATAA AGTTTGTCGCGCTAGCGTACTTCGTCAAAAATCGCCCGTTGTTTGCGAAC CAGTTGCCAGGTTACCAGGTAGACCCTGTGGTAAATCCTCTACCACCGGG AGGAGGGCCGGCCGATGCCACGGAGCCGTGGGTTGCCGCAATTCACGAGC GCACGTCCGAAAAATGGTATGGGGTGGGGAATCTAAGTAACGCGGCCCCT AACTACGATGTTACCGAGCTCTGTGTGCTTCGGATGTTGTGGTTGGTAGA ATATTGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig743:31793..32949-

>mRNA_P-littoralis_Contig743.16.1 ID=mRNA_P-littoralis_Contig743.16.1|Name=mRNA_P-littoralis_Contig743.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig743:31793..32949- (Pylaiella littoralis U1_48)
ATGCTTTGCGGCACCGACTTTACCCCGACTGTTTTTGGTTTGACTTCGTT
CTTCATGTTCAAAACATACTTTGACTTGTCGACAAATGCCGAAAACCATA
GGTTCGTCAAGGCCCTGGGTTCCACCAAAGAGGATGGGGTGGTCACCGGG
GTTGATTTGAGCAGAGAGGAATTGATAAAGTTTGTCGCGCTAGCGTACTT
CGTCAAAAATCGCCCGTTGTTTGCGAACCAGTTGCCAGGTTACCAGGTAG
ACCCTGTGGTAAATCCTCTACCACCGGGAGGAGGGCCGGCCGATGCCACG
GAGCCGTGGGTTGCCGCAATTCACGAGCGCACGTCCGAAAAATGGTATGG
GGTGGGGAATCTAAGTAACGCGGCCCCTAACTACGATGTTACCGAGCTCT
GTGTGCTTCGGATGTTGTGGTTGGTAGAATATTGG
back to top