mRNA_P-littoralis_Contig742.27.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 318 bits (814), Expect = 3.110e-100 Identity = 157/224 (70.09%), Postives = 183/224 (81.70%), Query Frame = 3
Query: 180 MVKFTAGLALIAASALSLSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR---TTKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISKQ 842
MVKFTAG AL AS LSL++A ++KVRVRNLTY QPFSP L+VAHT DV++F+EG A+DAIKLMAEDGDNSALL L ASD+V P+ICG V + PVFPGETWRG + +DE+ CPD V+S VSMLINTNDAF+GIDSD L ++KV+PPAFDAGTE NNELC+H+PGPAC ADSGNM D PGE FIHVHRGFHG+ +L E YDWRNPVAEVFI++Q
Sbjct: 1 MVKFTAGFAL--ASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGP----DLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 288 bits (737), Expect = 4.410e-89 Identity = 138/203 (67.98%), Postives = 165/203 (81.28%), Query Frame = 3
Query: 231 LSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL-RTTKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFIS 836
++NA E VRVRNLTY QPFSP +VAHT DVS+F+EG A+DA+K+MAEDGDNSAL+ L AS++V P+ICGGV+ + P+FPG+TWRG M VDE+ICPDA +S VSMLINTNDAF+GIDS+ L T KV+PPAFDAGTE NNELC+H+PGPAC ADSGNM D PGEGFI V RGFHG+ +L E YDWRNPVAEV ++
Sbjct: 1 MANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGP----DLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 287 bits (734), Expect = 2.420e-88 Identity = 146/229 (63.76%), Postives = 176/229 (76.86%), Query Frame = 3
Query: 180 MVKFTAGLALIAASALSLSNAA-------EYKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR--TTKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 839
MV FTA A+ AS +SL+NA+ +KVRVRNLTY QPFSPPLIVAHT DV++F+EG A DAIKLMAEDGDNSALL L S +V P+ICG V+++ PVFPGETWRG + VD ICP+ V+S V+MLINTNDAF+GIDSDTL +TK +PPAFDAGTE+N+E CS++PGP C A SGN + PGEG+IHVHRG HG+ G+L E YDWRNPVAE++I K
Sbjct: 1 MVNFTAAFAM--ASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGV-----GDLEEASYDWRNPVAEIYIQK 222
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 184 bits (467), Expect = 3.110e-49 Identity = 99/201 (49.25%), Postives = 126/201 (62.69%), Query Frame = 3
Query: 252 KVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL---RTTKVYPPAFDAGTEMNNELCSHMPGPACAAD--SGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 839
KVRV NLT++Q FSPP+IVAH +F G A AIKLMAEDG+N ++A+ + F CG ++ P+ PG+TW G + D C + V+S V+ L NTNDAFMGID +K++PPAFDAGTE NNE C+ MPG AC A S EGFIHVHRG +G+ G+LS+ Y W+NPVAEV +SK
Sbjct: 76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREGGF---CGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGV-----GDLSKADYGWKNPVAEVVVSK 268
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 180 bits (457), Expect = 1.030e-48 Identity = 97/203 (47.78%), Postives = 126/203 (62.07%), Query Frame = 3
Query: 249 YKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL---RTTKVYPPAFDAGTEMNNELCSHMPGPACAADSG---NMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 839
YKVRV NLT++Q FSPP+IVAH +F +G A AIK MAE+G N + + ++ F CG ++ P+ PG+TW G + D C V+S V+ L NTNDAFMGID R +K++PPAFDAGTE NNE C+ + G AC A N+ EGFIHVHRG +G+ G+LS+ YDW+NPVAEV +SK
Sbjct: 4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATREDGF---CGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGV-----GDLSQADYDWKNPVAEVVVSK 198
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.780e-46 Identity = 100/219 (45.66%), Postives = 129/219 (58.90%), Query Frame = 3
Query: 201 LALIAASALSLSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVS-MFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRT---TKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMD--APGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 839
L+L + + S S+ YKVRV NLT++Q FSPP+IVAH +F G A AIK MAE+G N + + + F CG +++ P+ PG+TW G + D C + V+S V+ L NTNDAFMGID +K +PPAFDAGTE NNE C+ MPG AC A + EGFIHVHRG G+ G+LS+ Y W NPVAEV +SK
Sbjct: 2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRESGF---CGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGV-----GDLSKADYGWNNPVAEVVVSK 212
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.400e-41 Identity = 104/238 (43.70%), Postives = 139/238 (58.40%), Query Frame = 3
Query: 180 MVKFTAGLALIAASALSLSNAAE--------YKVRVRNLTYQQPFSPPLIVAHTTDVS-MFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVP--VFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRT----TKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPG---EGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 839
MVKF GLAL AS LSL++ ++ YKVRV NLT++Q FS +IVAH +F EG+ A +AI ++AE+G + + + + F CG + +FPG+TW G + D C D V+S V+ L NTNDAFMGI +K +PPAFDAG+E NNE C+ MPG AC + + + G EGFIHVHRGF G+ G+LS+ Y W+NPVA V +SK
Sbjct: 1 MVKFAFGLAL--ASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATRERGF---CGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGI-----GDLSKD-YGWQNPVAVVVVSK 227
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: A0A7S2X629_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X629_9EUKA) HSP 1 Score: 132 bits (332), Expect = 2.610e-31 Identity = 85/222 (38.29%), Postives = 119/222 (53.60%), Query Frame = 3
Query: 228 SLSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVS-MFQEGSVATDAIKLMAEDGDNSALL-ALGASD---EVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRTT---KVYPPAFDAGTEMNNELCSHMPGPACAADSGNMM-DAPGEGFIHVHRGFHGLNEG----------IAGE-LSETGYDWRNPVAEVFI 833
S + EY + + N +QQPFS + H +D ++ G A++ + ++AEDG+ L+ A AS+ E F F G P F G+T + V+E S +M INTND FMG++ + T + P D+GTE NNELC+H+PGPAC DSGN+ + EG +HVHRGF G+NEG +G+ LS GY W NP+A V I
Sbjct: 4 SAQASTEYVISITNAAFQQPFSGYFVAVHNSDAPPLYVLGEAASEELAILAEDGNPMPLVQAYNASEGVRETFAFTDGA-----PYFAGDTASIAVDVNENY---PYVSLATMAINTNDCFMGLNGVKVFNTFKRVINLPGLDSGTEANNELCTHIPGPACLPDSGNLRANETSEGLVHVHRGFIGINEGNDDLTPAELGASGQPLSSAGYTWLNPMARVVI 217
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 131 bits (330), Expect = 5.250e-31 Identity = 90/223 (40.36%), Postives = 125/223 (56.05%), Query Frame = 3
Query: 192 TAGLALIAASALSLSNAAE-YKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR---TTKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPG--EGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISKQ 842
TA ++AA AL + + + V+NL Y QPFSP L V H + +FQ G+ A+ A++ +AE GD S +AL + ICG ++ P T++G + + + C + S V+ML TNDAF GI++ L + + PA+DAGTE NNE C ++ G C +D PG EGF+HVHRG HGLN G LS YDWRNPVA + +S Q
Sbjct: 8 TATTLILAAVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVAL--FQDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPN--LDTPGLGEGFVHVHRGVHGLNVSKPG-LS-VDYDWRNPVAYITVSVQ 221
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Match: A0A1Y0I1C8_9GAMM (Spondin domain-containing protein n=1 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0I1C8_9GAMM) HSP 1 Score: 130 bits (328), Expect = 9.490e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = 3
Query: 204 ALIAASAL-SLSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVSMFQEGSVATDAIKLMAEDGDNSALLALGASDEVFPFICGGVLSDVPVFPGETWRGFMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR---TTKVYPPAFDAGTEMNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGI------AGE-LSETGYDWRNPVAEVFI 833
ALIAA + S++ A Y+V V NLTY Q +PP++++H ++F G A+ +K +AE G+ L + G +DV + PG + + VD T A S +SML TNDAF+ I +++ + + Y P +DAGTE N ELC +PGP C S + EGFIH+HRGFHG+NE +GE L+ + +DWR P A++ I
Sbjct: 10 ALIAAMGMASVAEARSYEVTVTNLTYGQVLTPPVVISHRASFNVFHAGDAASSELKTLAETGNPMPLAESVIGSSAVRDVSTG--TDV-IPPGHSMT--VTVDATGL--AKISVMSMLATTNDAFIAIQGESIPFYGSREYYAPVWDAGTEANTELCDDIPGPPCGGASNMEVTDGAEGFIHIHRGFHGINEAAGDTGNGSGEGLTASRFDWRGPAAKITI 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig742.27.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig742.27.3 >prot_P-littoralis_Contig742.27.3 ID=prot_P-littoralis_Contig742.27.3|Name=mRNA_P-littoralis_Contig742.27.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp MVKFTAGLALIAASALSLSNAAEYKVRVRNLTYQQPFSPPLIVAHTTDVSback to top mRNA from alignment at P-littoralis_Contig742:50650..62743- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig742.27.3 ID=mRNA_P-littoralis_Contig742.27.3|Name=mRNA_P-littoralis_Contig742.27.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=12094bp|location=Sequence derived from alignment at P-littoralis_Contig742:50650..62743- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig742:50650..62743- >mRNA_P-littoralis_Contig742.27.3 ID=mRNA_P-littoralis_Contig742.27.3|Name=mRNA_P-littoralis_Contig742.27.3|organism=Pylaiella littoralis U1_48|type=CDS|length=666bp|location=Sequence derived from alignment at P-littoralis_Contig742:50650..62743- (Pylaiella littoralis U1_48)back to top |