prot_P-littoralis_Contig119.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig119.34.1
Unique Nameprot_P-littoralis_Contig119.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length840
Homology
BLAST of mRNA_P-littoralis_Contig119.34.1 vs. uniprot
Match: D7FY23_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY23_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 2.220e-123
Identity = 190/279 (68.10%), Postives = 223/279 (79.93%), Query Frame = 0
Query:  371 PSTSSHEAHQGRSCVVCKGKDQDQDLHLLNLCASCDRGFHTKCLDRRKGKDVLHWVCKECYEKNAAVYKSKCSECGLVAGRKCALCSACGGAFHPQCLEPPFQNRPPGSTPSALHGKNTWVCFHCECALPVVVGPGEDDPSAMAAGKWSSKE-FEKKSFKEGLRAFWDKEHAAAMAENVELLEKRREKQEAKKVVAEKEAAYEAAVQTGIVLPANESPSDVLTKAARLRPDGSALLCMHESMGNLVQANGALCQMIAWEMEKVKTLREQVRSLGGDPDV 648
            P+    E     SC  CKGK+QDQD +LL  CA+CDRGFHT+CLD++K KDV+HWVC+EC++K  +VY+S CSECGL AGRKCALCSACGGAFHPQCLEPP Q+RPPGSTP ALHGKNTWVCFHCECA+PVVV  GEDDP AMAA KWS+   F K +F+  LR FW+ EHA A   + E + +RRE+ E +K +AEK+AAYEAAVQTGIV+P  + P+D L +A   RPDGSALL MHE++GNLVQANGALCQMIAWE  KVK LREQVRSLGG+PDV
Sbjct:  351 PAAPVQEVRPRASCAKCKGKEQDQDQNLLIFCAACDRGFHTRCLDKKKSKDVVHWVCQECFDKTKSVYESICSECGLAAGRKCALCSACGGAFHPQCLEPPLQHRPPGSTPGALHGKNTWVCFHCECAIPVVVPAGEDDPDAMAALKWSAGSGFGKPAFEGKLRTFWEAEHARAARAHEESMRRRRERLEEEKKIAEKDAAYEAAVQTGIVVPTKDPPTDALARATLKRPDGSALLLMHEAIGNLVQANGALCQMIAWEKAKVKALREQVRSLGGNPDV 629          
BLAST of mRNA_P-littoralis_Contig119.34.1 vs. uniprot
Match: A0A6H5JE71_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE71_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.660e-50
Identity = 94/174 (54.02%), Postives = 114/174 (65.52%), Query Frame = 0
Query:  377 EAHQGRSCVVCKGKDQDQDLHLLNLCASCDRGFHTKCLDRRKGKDVLHWVCKECYEKNAAVYKSKCSECGLVAGRKCALCSACGGAFHPQCLEPPFQNRPPGSTPSALHGKNTWVCFHCECALPVVVGPGEDDPSAMAAGKWSSKE-FEKKSFKEGLRAFWDKEHAAAMAENVE 549
            E     SC  CKGK+QDQD +LL  CA+CDRGFHT+CL+++K KDV+HWVC+EC++K  AVY                           +CLEP  Q+RPPGSTP ALHGKNTWVCFHCECA+PVVV  GEDDP AMAA +WS+   F   +F+  LRAFW+ EHA A  E+ E
Sbjct:  407 EVRPRASCAKCKGKEQDQDQNLLIFCAACDRGFHTRCLNKKKSKDVVHWVCQECFDKTKAVY---------------------------ECLEPALQHRPPGSTPGALHGKNTWVCFHCECAIPVVVPAGEDDPDAMAALEWSAGSGFGAPAFQGKLRAFWEAEHARAAREHEE 553          
BLAST of mRNA_P-littoralis_Contig119.34.1 vs. uniprot
Match: A0A6H5K9E7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E7_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 7.960e-28
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 0
Query:  567 KEAAYEAAVQTGIVLPANESPSDVLTKAARLRPDGSALLCMHESMGNLVQANGALCQMIAWEMEKVKTLREQVRSLGGDPDVSLK--------KAGKKVGG 659
            K+AAYEAAVQTGIV+P  + P D L +A   RPDGSALL MHE++GNLVQANGALCQMI+WE  KVK LREQVRSLGG+PDV  +        KAG++ GG
Sbjct:    3 KKAAYEAAVQTGIVVPTKDPPGDALARATLKRPDGSALLLMHEAIGNLVQANGALCQMISWEKAKVKALREQVRSLGGNPDVRARAPSAAAGQKAGRRDGG 103          
BLAST of mRNA_P-littoralis_Contig119.34.1 vs. uniprot
Match: W7TXM7_9STRA (Prolyl 4-hydroxylase, alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXM7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.140e-5
Identity = 37/106 (34.91%), Postives = 48/106 (45.28%), Query Frame = 0
Query:  371 PSTSSHEAHQGRSCVVCKGKDQDQDLHLLNLCASCDRGFHTKCLDRRKGKDVLHWVCKECYEKN---AAVYKSK----CSECGLV-AGRKCALCSACGGAFHPQCL 468
            P         G  C VC G D++   HL+ LC SC+RGFHT CL  RK     ++ C  C  K    A   +S+    C  CG +       LC  C G +H QC+
Sbjct:  386 PRCPGKRPRPGDFCEVCGGGDRE---HLIVLCDSCERGFHTTCLGVRKVPKEAYF-CDSCRAKEKVKARTIRSREEGACHMCGSIDRPHHILLCDGCDGGWHLQCV 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig119.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FY23_ECTSI2.220e-12368.10PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JE71_9PHAE2.660e-5054.02PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K9E7_9PHAE7.960e-2865.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TXM7_9STRA3.140e-534.91Prolyl 4-hydroxylase, alpha subunit n=1 Tax=Nannoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 541..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..674
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 822..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 646..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..786
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 787..806
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..220
NoneNo IPR availableCDDcd15489PHD_SFcoord: 383..430
e-value: 1.16021E-6
score: 44.2302
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 383..431
e-value: 0.0056
score: 25.9
coord: 441..496
e-value: 0.063
score: 22.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 433..497
e-value: 1.9E-6
score: 29.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 325..432
e-value: 1.8E-7
score: 33.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 381..433
score: 8.902599
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 374..434

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig119contigP-littoralis_Contig119:204330..208725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig119.34.1mRNA_P-littoralis_Contig119.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig119 204330..209089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig119.34.1 ID=prot_P-littoralis_Contig119.34.1|Name=mRNA_P-littoralis_Contig119.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=840bp
MAKKSKQSKKGVAAGAAAMSSEKSSRKPASGSGSGSSKKYKTKPNGVAIS
VGSPKKEADDGGRSGATAVVAHTSPKPKTNSSSFAAAAAEAAAGTPAKRE
LAAAATAASSSPDSKQTKAKKKKTRTTKRGNITAPAAAQAAAEASPPTTT
TSIRRKAKAAAAAAAKAPVEVVANGGGSSSSSSSSNNGSSKGVQTNKNAR
NQVTQRSPPLAASSTFASDEDGSGGDDDNDKEHRGVGEGNPASVTIKAGS
SSGSKKGSSLPPAAAISPAPAPAPAAAKDSKKTKKQQRGAVAAKGTTAAA
TSSTTTTGTKRKASEEAEVTADDSDDTTDTDAEVPKDKPAVQKDKKKKKK
NSAAAGASTAGAPTSGAGSSPSTSSHEAHQGRSCVVCKGKDQDQDLHLLN
LCASCDRGFHTKCLDRRKGKDVLHWVCKECYEKNAAVYKSKCSECGLVAG
RKCALCSACGGAFHPQCLEPPFQNRPPGSTPSALHGKNTWVCFHCECALP
VVVGPGEDDPSAMAAGKWSSKEFEKKSFKEGLRAFWDKEHAAAMAENVEL
LEKRREKQEAKKVVAEKEAAYEAAVQTGIVLPANESPSDVLTKAARLRPD
GSALLCMHESMGNLVQANGALCQMIAWEMEKVKTLREQVRSLGGDPDVSL
KKAGKKVGGKTRGKGDKAEKKESVNGSADSPPAEAPPSASGARASSSSAG
LDGGGRGAKGDVSGSSTAAAATAAAAAVAVPKKIVPVKSATAVAVKDKSV
SKGKGKGKPKKGVAAAAAAASEDEEEEEEEEEGMGNSDKENESPTEGEDG
KEGGESGEELSASNQSLKEEEEGSHDDDDDDDDDDDDDDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD